RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 TRIM44Q96DX7 344 aaPredicted RBP8.83□□□□□ -1
CPEB4-202ENST00000334035 WRNQ14191 1432 aaPredicted RBP eCLIP8.81□□□□□ -1
CPEB4-202ENST00000334035 ABCC9O60706 1549 aa8.8□□□□□ -1
CPEB4-202ENST00000334035 GOLGA6L22H0YM25 854 aa8.8□□□□□ -1
CPEB4-202ENST00000334035 USP35Q9P2H5 1018 aa8.79□□□□□ -1
CPEB4-202ENST00000334035 NCLP19338 710 aaKnown RBP8.79□□□□□ -1
CPEB4-202ENST00000334035 IRX6P78412 446 aaPredicted RBP8.78□□□□□ -1
CPEB4-202ENST00000334035 FANCIQ9NVI1 1328 aa8.78□□□□□ -1
CPEB4-202ENST00000334035 PTMSP20962 102 aa8.77□□□□□ -1.01
CPEB4-202ENST00000334035 WDR43Q15061 677 aaKnown RBP eCLIP8.76□□□□□ -1.01
CPEB4-202ENST00000334035 VPS8Q8N3P4 1428 aa8.75□□□□□ -1.01
CPEB4-202ENST00000334035 TCERG1O14776 1098 aaKnown RBP8.73□□□□□ -1.01
CPEB4-202ENST00000334035 CCNB3Q8WWL7 1395 aa8.73□□□□□ -1.01
CPEB4-202ENST00000334035 NAP1L5Q96NT1 182 aaPredicted RBP8.73□□□□□ -1.01
CPEB4-202ENST00000334035 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
CPEB4-202ENST00000334035 ARID4BQ4LE39 1312 aaPredicted RBP8.72□□□□□ -1.01
CPEB4-202ENST00000334035 MTUS2Q5JR59 1369 aa8.72□□□□□ -1.01
CPEB4-202ENST00000334035 NACADO15069 1562 aa8.72□□□□□ -1.01
CPEB4-202ENST00000334035 ARXQ96QS3 562 aa8.71□□□□□ -1.01
CPEB4-202ENST00000334035 IPO9Q96P70 1041 aaKnown RBP8.71□□□□□ -1.01
CPEB4-202ENST00000334035 BAZ1AQ9NRL2 1556 aaPredicted RBP8.71□□□□□ -1.02
CPEB4-202ENST00000334035 P3H3Q8IVL6 736 aa8.71□□□□□ -1.02
CPEB4-202ENST00000334035 FHAD1B1AJZ9 1412 aa8.7□□□□□ -1.02
CPEB4-202ENST00000334035 SETD5Q9C0A6 1442 aa8.7□□□□□ -1.02
CPEB4-202ENST00000334035 KIF27Q86VH2 1401 aa8.69□□□□□ -1.02
CPEB4-202ENST00000334035 CFAP44Q96MT7 982 aa8.69□□□□□ -1.02
CPEB4-202ENST00000334035 MS4A1P11836 297 aa8.68□□□□□ -1.02
CPEB4-202ENST00000334035 CDCA8Q53HL2 280 aa8.68□□□□□ -1.02
CPEB4-202ENST00000334035 PABPN1Q86U42 306 aaKnown RBP eCLIP8.68□□□□□ -1.02
CPEB4-202ENST00000334035 CHMP4BQ9H444 224 aaKnown RBP8.68□□□□□ -1.02
CPEB4-202ENST00000334035 RTN4Q9NQC3 1192 aaKnown RBP8.67□□□□□ -1.02
CPEB4-202ENST00000334035 MYH16Q9H6N6 1097 aa8.67□□□□□ -1.02
CPEB4-202ENST00000334035 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
CPEB4-202ENST00000334035 LAS1LQ9Y4W2 734 aaKnown RBP8.66□□□□□ -1.02
CPEB4-202ENST00000334035 BAZ1BQ9UIG0 1483 aaKnown RBP8.66□□□□□ -1.02
CPEB4-202ENST00000334035 SLC24A1O60721 1099 aa8.64□□□□□ -1.03
CPEB4-202ENST00000334035 HIRIP3Q9BW71 556 aaPredicted RBP8.63□□□□□ -1.03
CPEB4-202ENST00000334035 B4GALNT3Q6L9W6 998 aa8.63□□□□□ -1.03
CPEB4-202ENST00000334035 CASC1Q6TDU7 716 aa8.63□□□□□ -1.03
CPEB4-202ENST00000334035 ZNF777Q9ULD5 760 aaPredicted RBP8.62□□□□□ -1.03
CPEB4-202ENST00000334035 MSNP26038 577 aaKnown RBP8.62□□□□□ -1.03
CPEB4-202ENST00000334035 PNNQ9H307 717 aaKnown RBP8.62□□□□□ -1.03
CPEB4-202ENST00000334035 PTMAP06454 111 aaKnown RBP8.62□□□□□ -1.03
CPEB4-202ENST00000334035 PDE3BQ13370 1112 aa8.61□□□□□ -1.03
CPEB4-202ENST00000334035 CDK11BP21127 795 aaKnown RBP8.6□□□□□ -1.03
CPEB4-202ENST00000334035 FBLN2P98095 1184 aa8.6□□□□□ -1.03
CPEB4-202ENST00000334035 NUDCQ9Y266 331 aa8.6□□□□□ -1.03
CPEB4-202ENST00000334035 ROCK2O75116 1388 aaKnown RBP8.6□□□□□ -1.03
CPEB4-202ENST00000334035 ARHGAP35Q9NRY4 1499 aa8.6□□□□□ -1.03
CPEB4-202ENST00000334035 HSCBQ8IWL3 235 aa8.6□□□□□ -1.03
CPEB4-202ENST00000334035 CHAF1AQ13111 956 aaPredicted RBP8.59□□□□□ -1.03
CPEB4-202ENST00000334035 RALBP1Q15311 655 aa8.59□□□□□ -1.03
CPEB4-202ENST00000334035 PHLDB1Q86UU1 1377 aa8.59□□□□□ -1.03
CPEB4-202ENST00000334035 GBP4Q96PP9 640 aa8.58□□□□□ -1.04
CPEB4-202ENST00000334035 CHIC2Q9UKJ5 165 aa8.58□□□□□ -1.04
CPEB4-202ENST00000334035 DHX57Q6P158 1386 aaKnown RBP8.58□□□□□ -1.04
CPEB4-202ENST00000334035 ARID3CA6NKF2 412 aa8.58□□□□□ -1.04
CPEB4-202ENST00000334035 GOLGA6L6A8MZA4 724 aa8.58□□□□□ -1.04
CPEB4-202ENST00000334035 CFAP53Q96M91 514 aa8.58□□□□□ -1.04
CPEB4-202ENST00000334035 GOLGA6L3A6NEY3 463 aa8.57□□□□□ -1.04
CPEB4-202ENST00000334035 TSPY4P0CV99 314 aa8.57□□□□□ -1.04
CPEB4-202ENST00000334035 TSPY10P0CW01 314 aa8.57□□□□□ -1.04
CPEB4-202ENST00000334035 DNTTIP2Q5QJE6 756 aaKnown RBP8.57□□□□□ -1.04
CPEB4-202ENST00000334035 GSE1Q14687 1217 aa8.56□□□□□ -1.04
CPEB4-202ENST00000334035 RAB3GAP2Q9H2M9 1393 aa8.56□□□□□ -1.04
CPEB4-202ENST00000334035 KNSTRNQ9Y448 316 aa8.56□□□□□ -1.04
CPEB4-202ENST00000334035 PPP1R15AO75807 674 aaPredicted RBP8.56□□□□□ -1.04
CPEB4-202ENST00000334035 SOGA1O94964 1423 aa8.55□□□□□ -1.04
CPEB4-202ENST00000334035 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
CPEB4-202ENST00000334035 HSP90AB1P08238 724 aaKnown RBP8.55□□□□□ -1.04
CPEB4-202ENST00000334035 SIN3AQ96ST3 1273 aa8.55□□□□□ -1.04
CPEB4-202ENST00000334035 TOP2AP11388 1531 aaKnown RBP8.55□□□□□ -1.04
CPEB4-202ENST00000334035 CARD11Q9BXL7 1154 aa8.54□□□□□ -1.04
CPEB4-202ENST00000334035 KTN1Q86UP2 1357 aaKnown RBP8.54□□□□□ -1.04
CPEB4-202ENST00000334035 HSPA5P11021 654 aaKnown RBP8.54□□□□□ -1.04
CPEB4-202ENST00000334035 HSP90AA2PQ14568 343 aaPredicted RBP8.54□□□□□ -1.04
CPEB4-202ENST00000334035 RCAN3Q9UKA8 241 aa8.54□□□□□ -1.04
CPEB4-202ENST00000334035 NRDCO43847 1150 aa8.53□□□□□ -1.04
CPEB4-202ENST00000334035 FTSJ3Q8IY81 847 aaKnown RBP8.53□□□□□ -1.04
CPEB4-202ENST00000334035 FMN1Q68DA7 1419 aa8.53□□□□□ -1.04
CPEB4-202ENST00000334035 DDX11L8A8MPP1 907 aa8.52□□□□□ -1.04
CPEB4-202ENST00000334035 RRP7BPQ9NSQ0 103 aa8.52□□□□□ -1.05
CPEB4-202ENST00000334035 KDM2AQ9Y2K7 1162 aa8.51□□□□□ -1.05
CPEB4-202ENST00000334035 SKOR2Q2VWA4 1001 aaPredicted RBP8.51□□□□□ -1.05
CPEB4-202ENST00000334035 PMFBP1Q8TBY8 1022 aa8.51□□□□□ -1.05
CPEB4-202ENST00000334035 RGS3P49796 1198 aa8.51□□□□□ -1.05
CPEB4-202ENST00000334035 SYAP1Q96A49 352 aaPredicted RBP8.5□□□□□ -1.05
CPEB4-202ENST00000334035 KIAA2012Q0VF49 1180 aa8.5□□□□□ -1.05
CPEB4-202ENST00000334035 CENPQQ7L2Z9 268 aaPredicted RBP8.49□□□□□ -1.05
CPEB4-202ENST00000334035 TMF1P82094 1093 aa8.49□□□□□ -1.05
CPEB4-202ENST00000334035 RWDD1Q9H446 243 aaPredicted RBP8.49□□□□□ -1.05
CPEB4-202ENST00000334035 CCDC88BA6NC98 1476 aa8.49□□□□□ -1.05
CPEB4-202ENST00000334035 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.48□□□□□ -1.05
CPEB4-202ENST00000334035 ZRSR1Q15695 479 aaKnown RBP8.48□□□□□ -1.05
CPEB4-202ENST00000334035 MTERF4Q7Z6M4 381 aaKnown RBP8.48□□□□□ -1.05
CPEB4-202ENST00000334035 MAP7D2Q96T17 732 aa8.48□□□□□ -1.05
CPEB4-202ENST00000334035 FAM161AQ3B820 660 aa8.47□□□□□ -1.05
CPEB4-202ENST00000334035 PLPPR3Q6T4P5 718 aa8.47□□□□□ -1.05
CPEB4-202ENST00000334035 MAPK8IP3Q9UPT6 1336 aa8.47□□□□□ -1.05
CPEB4-202ENST00000334035 KIF15Q9NS87 1388 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms