RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 NUP160Q12769 1436 aa16.48■□□□□ 0.23
SYN3-201ENST00000332840 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
SYN3-201ENST00000332840 IGF1RP08069 1367 aa16.45■□□□□ 0.22
SYN3-201ENST00000332840 CEP170Q5SW79 1584 aa16.4■□□□□ 0.22
SYN3-201ENST00000332840 CUL7Q14999 1698 aa16.39■□□□□ 0.21
SYN3-201ENST00000332840 CARMIL1Q5VZK9 1371 aa16.36■□□□□ 0.21
SYN3-201ENST00000332840 MSH5O43196 834 aa16.35■□□□□ 0.21
SYN3-201ENST00000332840 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
SYN3-201ENST00000332840 SHROOM2Q13796 1616 aa16.31■□□□□ 0.2
SYN3-201ENST00000332840 KIAA0586Q9BVV6 1533 aa16.31■□□□□ 0.2
SYN3-201ENST00000332840 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
SYN3-201ENST00000332840 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
SYN3-201ENST00000332840 PIAS4Q8N2W9 510 aaPredicted RBP16.3■□□□□ 0.2
SYN3-201ENST00000332840 RUSC2Q8N2Y8 1516 aa16.29■□□□□ 0.2
SYN3-201ENST00000332840 PRG4Q92954 1404 aaPredicted RBP16.28■□□□□ 0.2
SYN3-201ENST00000332840 ADRA2BP18089 450 aa16.27■□□□□ 0.2
SYN3-201ENST00000332840 RAPGEF2Q9Y4G8 1499 aa16.26■□□□□ 0.19
SYN3-201ENST00000332840 EEA1Q15075 1411 aa16.19■□□□□ 0.18
SYN3-201ENST00000332840 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
SYN3-201ENST00000332840 IQGAP2Q13576 1575 aa16.17■□□□□ 0.18
SYN3-201ENST00000332840 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
SYN3-201ENST00000332840 ADCY10Q96PN6 1610 aa16.13■□□□□ 0.17
SYN3-201ENST00000332840 FAM69CQ0P6D2 419 aa16.13■□□□□ 0.17
SYN3-201ENST00000332840 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
SYN3-201ENST00000332840 DIP2BQ9P265 1576 aa16.13■□□□□ 0.17
SYN3-201ENST00000332840 KDM6BO15054 1643 aa16.11■□□□□ 0.17
SYN3-201ENST00000332840 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
SYN3-201ENST00000332840 PTPRGP23470 1445 aa16.11■□□□□ 0.17
SYN3-201ENST00000332840 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
SYN3-201ENST00000332840 UGGT2Q9NYU1 1516 aa16.09■□□□□ 0.17
SYN3-201ENST00000332840 ABCC10Q5T3U5 1492 aa16.08■□□□□ 0.16
SYN3-201ENST00000332840 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
SYN3-201ENST00000332840 TTBK1Q5TCY1 1321 aaPredicted RBP16.05■□□□□ 0.16
SYN3-201ENST00000332840 DISP1Q96F81 1524 aa16.04■□□□□ 0.16
SYN3-201ENST00000332840 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
SYN3-201ENST00000332840 KDM4FA0A1W2PPD8 638 aa16.01■□□□□ 0.15
SYN3-201ENST00000332840 KIAA0556O60303 1618 aa15.99■□□□□ 0.15
SYN3-201ENST00000332840 FAM9AQ8IZU1 332 aaPredicted RBP15.99■□□□□ 0.15
SYN3-201ENST00000332840 UHRF1BP1LA0JNW5 1464 aa15.98■□□□□ 0.15
SYN3-201ENST00000332840 UACAQ9BZF9 1416 aa15.98■□□□□ 0.15
SYN3-201ENST00000332840 CTTNBP2Q8WZ74 1663 aa15.98■□□□□ 0.15
SYN3-201ENST00000332840 ABCC2Q92887 1545 aa15.97■□□□□ 0.15
SYN3-201ENST00000332840 PPRC1Q5VV67 1664 aaKnown RBP15.96■□□□□ 0.15
SYN3-201ENST00000332840 KIF21BO75037 1637 aa15.93■□□□□ 0.14
SYN3-201ENST00000332840 ILDR1Q86SU0 546 aaPredicted RBP15.91■□□□□ 0.14
SYN3-201ENST00000332840 PLB1Q6P1J6 1458 aa15.9■□□□□ 0.14
SYN3-201ENST00000332840 KDM5BQ9UGL1 1544 aa15.89■□□□□ 0.13
SYN3-201ENST00000332840 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
SYN3-201ENST00000332840 ADGRL1O94910 1474 aa15.84■□□□□ 0.13
SYN3-201ENST00000332840 SAMD9Q5K651 1589 aa15.83■□□□□ 0.13
SYN3-201ENST00000332840 UBTFP17480 764 aaKnown RBP15.83■□□□□ 0.12
SYN3-201ENST00000332840 EFCAB5A4FU69 1503 aa15.83■□□□□ 0.12
SYN3-201ENST00000332840 ABCA8O94911 1581 aa15.83■□□□□ 0.12
SYN3-201ENST00000332840 P3H3Q8IVL6 736 aa15.81■□□□□ 0.12
SYN3-201ENST00000332840 ZCCHC11Q5TAX3 1644 aaKnown RBP15.8■□□□□ 0.12
SYN3-201ENST00000332840 MAP3K4Q9Y6R4 1608 aa15.8■□□□□ 0.12
SYN3-201ENST00000332840 GLI2P10070 1586 aa15.79■□□□□ 0.12
SYN3-201ENST00000332840 HECW2Q9P2P5 1572 aa15.79■□□□□ 0.12
SYN3-201ENST00000332840 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
SYN3-201ENST00000332840 RANGAP1P46060 587 aaPredicted RBP15.77■□□□□ 0.12
SYN3-201ENST00000332840 COL17A1Q9UMD9 1497 aaPredicted RBP15.77■□□□□ 0.11
SYN3-201ENST00000332840 EPRSP07814 1512 aaKnown RBP15.76■□□□□ 0.11
SYN3-201ENST00000332840 FHOD3Q2V2M9 1422 aa15.76■□□□□ 0.11
SYN3-201ENST00000332840 FMN1Q68DA7 1419 aa15.71■□□□□ 0.11
SYN3-201ENST00000332840 EHMT2Q96KQ7 1210 aa15.71■□□□□ 0.11
SYN3-201ENST00000332840 RAPGEF6Q8TEU7 1601 aa15.71■□□□□ 0.11
SYN3-201ENST00000332840 ATP10BO94823 1461 aa15.71■□□□□ 0.1
SYN3-201ENST00000332840 TEX14Q8IWB6 1497 aa15.71■□□□□ 0.1
SYN3-201ENST00000332840 NUP153P49790 1475 aaKnown RBP15.68■□□□□ 0.1
SYN3-201ENST00000332840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
SYN3-201ENST00000332840 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
SYN3-201ENST00000332840 ARHGAP35Q9NRY4 1499 aa15.66■□□□□ 0.1
SYN3-201ENST00000332840 ARID3CA6NKF2 412 aa15.66■□□□□ 0.1
SYN3-201ENST00000332840 POTEDQ86YR6 584 aa15.66■□□□□ 0.1
SYN3-201ENST00000332840 KCNH8Q96L42 1107 aa15.65■□□□□ 0.1
SYN3-201ENST00000332840 CD109Q6YHK3 1445 aa15.65■□□□□ 0.1
SYN3-201ENST00000332840 CFAP43Q8NDM7 1665 aa15.63■□□□□ 0.09
SYN3-201ENST00000332840 MAGI3Q5TCQ9 1506 aa15.63■□□□□ 0.09
SYN3-201ENST00000332840 PLEKHD1A6NEE1 506 aa15.62■□□□□ 0.09
SYN3-201ENST00000332840 LOC105371045A0A1W2PR82 267 aa15.59■□□□□ 0.09
SYN3-201ENST00000332840 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
SYN3-201ENST00000332840 PHLDB1Q86UU1 1377 aa15.58■□□□□ 0.08
SYN3-201ENST00000332840 CLIP1P30622 1438 aa15.58■□□□□ 0.08
SYN3-201ENST00000332840 HECW1Q76N89 1606 aa15.57■□□□□ 0.08
SYN3-201ENST00000332840 ABCA9Q8IUA7 1624 aa15.55■□□□□ 0.08
SYN3-201ENST00000332840 ATP1B4Q9UN42 357 aaPredicted RBP15.55■□□□□ 0.08
SYN3-201ENST00000332840 CASKIN1Q8WXD9 1431 aa15.53■□□□□ 0.08
SYN3-201ENST00000332840 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.07
SYN3-201ENST00000332840 CCDC18Q5T9S5 1454 aa15.52■□□□□ 0.07
SYN3-201ENST00000332840 NEO1Q92859 1461 aa15.52■□□□□ 0.07
SYN3-201ENST00000332840 FYCO1Q9BQS8 1478 aa15.5■□□□□ 0.07
SYN3-201ENST00000332840 ARAP3Q8WWN8 1544 aa15.49■□□□□ 0.07
SYN3-201ENST00000332840 TROQ12816 1431 aaPredicted RBP15.47■□□□□ 0.07
SYN3-201ENST00000332840 CEP162Q5TB80 1403 aa15.47■□□□□ 0.07
SYN3-201ENST00000332840 ADAMTSL3P82987 1691 aa15.46■□□□□ 0.07
SYN3-201ENST00000332840 PCF11O94913 1555 aaKnown RBP15.45■□□□□ 0.06
SYN3-201ENST00000332840 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.45■□□□□ 0.06
SYN3-201ENST00000332840 FANCAO15360 1455 aa15.44■□□□□ 0.06
SYN3-201ENST00000332840 MADDQ8WXG6 1647 aa15.43■□□□□ 0.06
SYN3-201ENST00000332840 BCORL1Q5H9F3 1711 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms