RNA–Protein interactions for RNA: ENST00000331837.5

NDN-201, Transcript of necdin, MAGE family member, humanhuman

APPRIS P1 BASIC

Gene NDN, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDN-201ENST00000331837 ARHGAP35Q9NRY4 1499 aa28.98■■■□□ 2.23
NDN-201ENST00000331837 SNAPC4Q5SXM2 1469 aa28.94■■■□□ 2.22
NDN-201ENST00000331837 TRIM26Q12899 539 aaPredicted RBP28.92■■■□□ 2.22
NDN-201ENST00000331837 TTBK1Q5TCY1 1321 aaPredicted RBP28.84■■■□□ 2.21
NDN-201ENST00000331837 MAGI1Q96QZ7 1491 aaPredicted RBP28.82■■■□□ 2.2
NDN-201ENST00000331837 P3H3Q8IVL6 736 aa28.79■■■□□ 2.2
NDN-201ENST00000331837 EFCAB5A4FU69 1503 aa28.77■■■□□ 2.2
NDN-201ENST00000331837 GRIN2AQ12879 1464 aa28.76■■■□□ 2.19
NDN-201ENST00000331837 APLP2Q06481 763 aa28.73■■■□□ 2.19
NDN-201ENST00000331837 SYNJ2O15056 1496 aa28.73■■■□□ 2.19
NDN-201ENST00000331837 IQGAP2Q13576 1575 aa28.72■■■□□ 2.19
NDN-201ENST00000331837 FHOD3Q2V2M9 1422 aa28.71■■■□□ 2.19
NDN-201ENST00000331837 CHMP7Q8WUX9 453 aaPredicted RBP28.7■■■□□ 2.18
NDN-201ENST00000331837 SAMD9Q5K651 1589 aa28.7■■■□□ 2.18
NDN-201ENST00000331837 FBLN2P98095 1184 aa28.69■■■□□ 2.18
NDN-201ENST00000331837 CEP170Q5SW79 1584 aa28.62■■■□□ 2.17
NDN-201ENST00000331837 PCF11O94913 1555 aaKnown RBP28.61■■■□□ 2.17
NDN-201ENST00000331837 KIAA0586Q9BVV6 1533 aa28.6■■■□□ 2.17
NDN-201ENST00000331837 CHD1O14646 1710 aa28.54■■■□□ 2.16
NDN-201ENST00000331837 UGGT2Q9NYU1 1516 aa28.54■■■□□ 2.16
NDN-201ENST00000331837 NUP160Q12769 1436 aa28.5■■■□□ 2.15
NDN-201ENST00000331837 FMN1Q68DA7 1419 aa28.5■■■□□ 2.15
NDN-201ENST00000331837 KANK4Q5T7N3 995 aaPredicted RBP28.5■■■□□ 2.15
NDN-201ENST00000331837 ATP1B4Q9UN42 357 aaPredicted RBP28.5■■■□□ 2.15
NDN-201ENST00000331837 FYCO1Q9BQS8 1478 aa28.47■■■□□ 2.15
NDN-201ENST00000331837 TIAM1Q13009 1591 aa28.47■■■□□ 2.15
NDN-201ENST00000331837 CASKIN1Q8WXD9 1431 aa28.46■■■□□ 2.15
NDN-201ENST00000331837 CFAP43Q8NDM7 1665 aa28.44■■■□□ 2.14
NDN-201ENST00000331837 KIAA0556O60303 1618 aa28.44■■■□□ 2.14
NDN-201ENST00000331837 MAP3K1Q13233 1512 aa28.42■■■□□ 2.14
NDN-201ENST00000331837 DISP1Q96F81 1524 aa28.42■■■□□ 2.14
NDN-201ENST00000331837 LRRIQ1Q96JM4 1722 aa28.38■■■□□ 2.13
NDN-201ENST00000331837 JPH4Q96JJ6 628 aa28.33■■■□□ 2.13
NDN-201ENST00000331837 LRRC9Q6ZRR7 1453 aa28.32■■■□□ 2.12
NDN-201ENST00000331837 HECW1Q76N89 1606 aa28.27■■■□□ 2.12
NDN-201ENST00000331837 CARMIL2Q6F5E8 1435 aa28.24■■■□□ 2.11
NDN-201ENST00000331837 RAPGEF6Q8TEU7 1601 aa28.18■■■□□ 2.1
NDN-201ENST00000331837 PRG4Q92954 1404 aaPredicted RBP28.16■■■□□ 2.1
NDN-201ENST00000331837 CCDC18Q5T9S5 1454 aa28.16■■■□□ 2.1
NDN-201ENST00000331837 EPRSP07814 1512 aaKnown RBP28.15■■■□□ 2.1
NDN-201ENST00000331837 SHROOM2Q13796 1616 aa28.15■■■□□ 2.1
NDN-201ENST00000331837 ARID3CA6NKF2 412 aa28.14■■■□□ 2.09
NDN-201ENST00000331837 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
NDN-201ENST00000331837 HRCP23327 699 aa28.13■■■□□ 2.09
NDN-201ENST00000331837 MTUS2Q5JR59 1369 aa28.13■■■□□ 2.09
NDN-201ENST00000331837 HNRNPUL2Q1KMD3 747 aaKnown RBP28.12■■■□□ 2.09
NDN-201ENST00000331837 RRBP1Q9P2E9 1410 aaKnown RBP28.11■■■□□ 2.09
NDN-201ENST00000331837 CLASP1Q7Z460 1538 aa28.1■■■□□ 2.09
NDN-201ENST00000331837 PHLDB1Q86UU1 1377 aa28.09■■■□□ 2.09
NDN-201ENST00000331837 PLB1Q6P1J6 1458 aa28.09■■■□□ 2.09
NDN-201ENST00000331837 NUP153P49790 1475 aaKnown RBP28.08■■■□□ 2.09
NDN-201ENST00000331837 MAGI3Q5TCQ9 1506 aa28.08■■■□□ 2.09
NDN-201ENST00000331837 EHBP1L1Q8N3D4 1523 aa28.06■■■□□ 2.08
NDN-201ENST00000331837 CCNB3Q8WWL7 1395 aa28.04■■■□□ 2.08
NDN-201ENST00000331837 SUPT6HQ7KZ85 1726 aaKnown RBP28.03■■■□□ 2.08
NDN-201ENST00000331837 ERCC6L2Q5T890 1561 aa28.03■■■□□ 2.08
NDN-201ENST00000331837 ABCA8O94911 1581 aa27.99■■■□□ 2.07
NDN-201ENST00000331837 NCOA2Q15596 1464 aa27.97■■■□□ 2.07
NDN-201ENST00000331837 PTPRGP23470 1445 aa27.97■■■□□ 2.07
NDN-201ENST00000331837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.96■■■□□ 2.07
NDN-201ENST00000331837 ITGAEP38570 1179 aa27.9■■■□□ 2.06
NDN-201ENST00000331837 FAM50AQ14320 339 aaKnown RBP27.9■■■□□ 2.06
NDN-201ENST00000331837 ARHGEF11O15085 1522 aa27.88■■■□□ 2.05
NDN-201ENST00000331837 FGD6Q6ZV73 1430 aa27.86■■■□□ 2.05
NDN-201ENST00000331837 MYOM3Q5VTT5 1437 aa27.85■■■□□ 2.05
NDN-201ENST00000331837 CDK11AQ9UQ88 783 aaPredicted RBP27.84■■■□□ 2.05
NDN-201ENST00000331837 CCER1Q8TC90 406 aaPredicted RBP27.82■■■□□ 2.04
NDN-201ENST00000331837 ATP10BO94823 1461 aa27.82■■■□□ 2.04
NDN-201ENST00000331837 UACAQ9BZF9 1416 aa27.81■■■□□ 2.04
NDN-201ENST00000331837 OSCARQ8IYS5 282 aa27.79■■■□□ 2.04
NDN-201ENST00000331837 TROQ12816 1431 aaPredicted RBP27.78■■■□□ 2.04
NDN-201ENST00000331837 PTPN23Q9H3S7 1636 aa27.76■■■□□ 2.03
NDN-201ENST00000331837 KIF14Q15058 1648 aa27.75■■■□□ 2.03
NDN-201ENST00000331837 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.74■■■□□ 2.03
NDN-201ENST00000331837 ABCC2Q92887 1545 aa27.73■■■□□ 2.03
NDN-201ENST00000331837 ADCY10Q96PN6 1610 aa27.73■■■□□ 2.03
NDN-201ENST00000331837 ZEB1P37275 1124 aaPredicted RBP27.71■■■□□ 2.03
NDN-201ENST00000331837 PLEKHD1A6NEE1 506 aa27.7■■■□□ 2.02
NDN-201ENST00000331837 TCOF1Q13428 1488 aaKnown RBP27.64■■■□□ 2.02
NDN-201ENST00000331837 MIA2Q96PC5 1412 aa27.64■■■□□ 2.02
NDN-201ENST00000331837 ITSN2Q9NZM3 1697 aa27.62■■■□□ 2.01
NDN-201ENST00000331837 UHRF1BP1LA0JNW5 1464 aa27.61■■■□□ 2.01
NDN-201ENST00000331837 ZCCHC11Q5TAX3 1644 aaKnown RBP27.61■■■□□ 2.01
NDN-201ENST00000331837 PTPRKQ15262 1439 aa27.58■■■□□ 2.01
NDN-201ENST00000331837 CDC42BPAQ5VT25 1732 aa27.57■■■□□ 2
NDN-201ENST00000331837 GPATCH8Q9UKJ3 1502 aaKnown RBP27.56■■■□□ 2
NDN-201ENST00000331837 SETD5Q9C0A6 1442 aa27.56■■■□□ 2
NDN-201ENST00000331837 RAB3GAP2Q9H2M9 1393 aa27.55■■■□□ 2
NDN-201ENST00000331837 ABCC10Q5T3U5 1492 aa27.55■■■□□ 2
NDN-201ENST00000331837 KDM5BQ9UGL1 1544 aa27.53■■■□□ 2
NDN-201ENST00000331837 ZNF644Q9H582 1327 aaPredicted RBP27.52■■■□□ 2
NDN-201ENST00000331837 CFDP1Q9UEE9 299 aaPredicted RBP27.51■■□□□ 1.99
NDN-201ENST00000331837 CAMSAP2Q08AD1 1489 aa27.48■■□□□ 1.99
NDN-201ENST00000331837 DHX57Q6P158 1386 aaKnown RBP27.47■■□□□ 1.99
NDN-201ENST00000331837 ZNF777Q9ULD5 760 aaPredicted RBP27.46■■□□□ 1.99
NDN-201ENST00000331837 DNMT1P26358 1616 aaKnown RBP27.45■■□□□ 1.99
NDN-201ENST00000331837 CHIC2Q9UKJ5 165 aa27.45■■□□□ 1.98
NDN-201ENST00000331837 TTC37Q6PGP7 1564 aa27.44■■□□□ 1.98
NDN-201ENST00000331837 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.42■■□□□ 1.98
NDN-201ENST00000331837 KCNH8Q96L42 1107 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms