RNA–Protein interactions for RNA: ENST00000331559.9

MEIS3-201, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 2,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-201ENST00000331559 MRC2Q9UBG0 1479 aa34.94■■■■□ 3.18
MEIS3-201ENST00000331559 HNRNPUL2Q1KMD3 747 aaKnown RBP34.94■■■■□ 3.18
MEIS3-201ENST00000331559 TIAM1Q13009 1591 aa34.89■■■■□ 3.18
MEIS3-201ENST00000331559 RRBP1Q9P2E9 1410 aaKnown RBP34.87■■■■□ 3.17
MEIS3-201ENST00000331559 PCF11O94913 1555 aaKnown RBP34.77■■■■□ 3.16
MEIS3-201ENST00000331559 AQRO60306 1485 aaKnown RBP eCLIP34.76■■■■□ 3.16
MEIS3-201ENST00000331559 CFAP43Q8NDM7 1665 aa34.76■■■■□ 3.15
MEIS3-201ENST00000331559 FHOD3Q2V2M9 1422 aa34.74■■■■□ 3.15
MEIS3-201ENST00000331559 FYCO1Q9BQS8 1478 aa34.74■■■■□ 3.15
MEIS3-201ENST00000331559 PBRM1Q86U86 1689 aa34.73■■■■□ 3.15
MEIS3-201ENST00000331559 LRRC9Q6ZRR7 1453 aa34.72■■■■□ 3.15
MEIS3-201ENST00000331559 WDR62O43379 1518 aa34.71■■■■□ 3.15
MEIS3-201ENST00000331559 CCNB3Q8WWL7 1395 aa34.7■■■■□ 3.15
MEIS3-201ENST00000331559 CASKIN1Q8WXD9 1431 aa34.69■■■■□ 3.14
MEIS3-201ENST00000331559 FMN1Q68DA7 1419 aa34.68■■■■□ 3.14
MEIS3-201ENST00000331559 SAMD9Q5K651 1589 aa34.68■■■■□ 3.14
MEIS3-201ENST00000331559 P3H3Q8IVL6 736 aa34.67■■■■□ 3.14
MEIS3-201ENST00000331559 IFT140Q96RY7 1462 aa34.66■■■■□ 3.14
MEIS3-201ENST00000331559 GRIN2BQ13224 1484 aa34.6■■■■□ 3.13
MEIS3-201ENST00000331559 ADAMTS12P58397 1594 aa34.6■■■■□ 3.13
MEIS3-201ENST00000331559 SNAPC4Q5SXM2 1469 aa34.53■■■■□ 3.12
MEIS3-201ENST00000331559 DIEXFQ68CQ4 756 aaKnown RBP34.52■■■■□ 3.12
MEIS3-201ENST00000331559 CLSPNQ9HAW4 1339 aa34.5■■■■□ 3.11
MEIS3-201ENST00000331559 ERCC6Q03468 1493 aa34.48■■■■□ 3.11
MEIS3-201ENST00000331559 ATP1B4Q9UN42 357 aaPredicted RBP34.47■■■■□ 3.11
MEIS3-201ENST00000331559 SCAF1Q9H7N4 1312 aaKnown RBP34.47■■■■□ 3.11
MEIS3-201ENST00000331559 THOC2Q8NI27 1593 aaKnown RBP34.46■■■■□ 3.11
MEIS3-201ENST00000331559 PHLDB1Q86UU1 1377 aa34.45■■■■□ 3.11
MEIS3-201ENST00000331559 IQGAP2Q13576 1575 aa34.43■■■■□ 3.1
MEIS3-201ENST00000331559 ZNF608Q9ULD9 1512 aaPredicted RBP34.42■■■■□ 3.1
MEIS3-201ENST00000331559 DHX57Q6P158 1386 aaKnown RBP34.39■■■■□ 3.1
MEIS3-201ENST00000331559 EIF4G3O43432 1585 aaKnown RBP34.33■■■■□ 3.09
MEIS3-201ENST00000331559 ZNF316A6NFI3 1004 aaPredicted RBP34.32■■■■□ 3.08
MEIS3-201ENST00000331559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.31■■■■□ 3.08
MEIS3-201ENST00000331559 UGGT2Q9NYU1 1516 aa34.28■■■■□ 3.08
MEIS3-201ENST00000331559 MTUS2Q5JR59 1369 aa34.27■■■■□ 3.08
MEIS3-201ENST00000331559 LRRIQ1Q96JM4 1722 aa34.25■■■■□ 3.07
MEIS3-201ENST00000331559 ITGAEP38570 1179 aa34.25■■■■□ 3.07
MEIS3-201ENST00000331559 CCDC18Q5T9S5 1454 aa34.24■■■■□ 3.07
MEIS3-201ENST00000331559 KIAA0586Q9BVV6 1533 aa34.22■■■■□ 3.07
MEIS3-201ENST00000331559 EHBP1L1Q8N3D4 1523 aa34.21■■■■□ 3.07
MEIS3-201ENST00000331559 HECW1Q76N89 1606 aa34.21■■■■□ 3.07
MEIS3-201ENST00000331559 MAGI1Q96QZ7 1491 aaPredicted RBP34.2■■■■□ 3.07
MEIS3-201ENST00000331559 FAM50AQ14320 339 aaKnown RBP34.2■■■■□ 3.07
MEIS3-201ENST00000331559 ACIN1Q9UKV3 1341 aaKnown RBP34.2■■■■□ 3.06
MEIS3-201ENST00000331559 GRIN2AQ12879 1464 aa34.19■■■■□ 3.06
MEIS3-201ENST00000331559 SETD5Q9C0A6 1442 aa34.18■■■■□ 3.06
MEIS3-201ENST00000331559 RAB3GAP2Q9H2M9 1393 aa34.17■■■■□ 3.06
MEIS3-201ENST00000331559 FGD6Q6ZV73 1430 aa34.16■■■■□ 3.06
MEIS3-201ENST00000331559 NEUROD1Q13562 356 aa34.15■■■■□ 3.06
MEIS3-201ENST00000331559 SUPT6HQ7KZ85 1726 aaKnown RBP34.14■■■■□ 3.06
MEIS3-201ENST00000331559 NCOA2Q15596 1464 aa34.1■■■■□ 3.05
MEIS3-201ENST00000331559 SYNJ2O15056 1496 aa34.07■■■■□ 3.05
MEIS3-201ENST00000331559 KIAA0556O60303 1618 aa34.07■■■■□ 3.04
MEIS3-201ENST00000331559 MYOM3Q5VTT5 1437 aa34.06■■■■□ 3.04
MEIS3-201ENST00000331559 EPRSP07814 1512 aaKnown RBP34.04■■■■□ 3.04
MEIS3-201ENST00000331559 ARHGEF11O15085 1522 aa34.04■■■■□ 3.04
MEIS3-201ENST00000331559 DISP1Q96F81 1524 aa34.02■■■■□ 3.04
MEIS3-201ENST00000331559 CENPBP07199 599 aaPredicted RBP34■■■■□ 3.03
MEIS3-201ENST00000331559 MAGI3Q5TCQ9 1506 aa33.99■■■■□ 3.03
MEIS3-201ENST00000331559 CHMP7Q8WUX9 453 aaPredicted RBP33.96■■■■□ 3.03
MEIS3-201ENST00000331559 CEP170Q5SW79 1584 aa33.93■■■■□ 3.02
MEIS3-201ENST00000331559 MAPKBP1O60336 1514 aa33.93■■■■□ 3.02
MEIS3-201ENST00000331559 NUP160Q12769 1436 aa33.89■■■■□ 3.02
MEIS3-201ENST00000331559 CDK13Q14004 1512 aaKnown RBP33.89■■■■□ 3.02
MEIS3-201ENST00000331559 PTPN23Q9H3S7 1636 aa33.89■■■■□ 3.02
MEIS3-201ENST00000331559 RAPGEF6Q8TEU7 1601 aa33.85■■■■□ 3.01
MEIS3-201ENST00000331559 TCOF1Q13428 1488 aaKnown RBP33.85■■■■□ 3.01
MEIS3-201ENST00000331559 HFM1A2PYH4 1435 aa33.83■■■■□ 3.01
MEIS3-201ENST00000331559 MIER1Q8N108 512 aa33.8■■■■□ 3
MEIS3-201ENST00000331559 MIA2Q96PC5 1412 aa33.8■■■■□ 3
MEIS3-201ENST00000331559 NUP153P49790 1475 aaKnown RBP33.79■■■■□ 3
MEIS3-201ENST00000331559 PTPRKQ15262 1439 aa33.78■■■■□ 3
MEIS3-201ENST00000331559 CARMIL2Q6F5E8 1435 aa33.78■■■■□ 3
MEIS3-201ENST00000331559 GTF3C3Q9Y5Q9 886 aa33.77■■■■□ 3
MEIS3-201ENST00000331559 FBLN2P98095 1184 aa33.76■■■□□ 2.99
MEIS3-201ENST00000331559 CDK11AQ9UQ88 783 aaPredicted RBP33.7■■■□□ 2.99
MEIS3-201ENST00000331559 NAIPQ13075 1403 aa33.69■■■□□ 2.98
MEIS3-201ENST00000331559 JPH4Q96JJ6 628 aa33.68■■■□□ 2.98
MEIS3-201ENST00000331559 AKNAQ7Z591 1439 aa33.65■■■□□ 2.98
MEIS3-201ENST00000331559 YTHDC1Q96MU7 727 aaKnown RBP33.65■■■□□ 2.98
MEIS3-201ENST00000331559 UACAQ9BZF9 1416 aa33.65■■■□□ 2.98
MEIS3-201ENST00000331559 TIMELESSQ9UNS1 1208 aa33.65■■■□□ 2.98
MEIS3-201ENST00000331559 ARID3CA6NKF2 412 aa33.62■■■□□ 2.97
MEIS3-201ENST00000331559 PELP1Q8IZL8 1130 aaKnown RBP33.61■■■□□ 2.97
MEIS3-201ENST00000331559 GCC2Q8IWJ2 1684 aa33.59■■■□□ 2.97
MEIS3-201ENST00000331559 PLB1Q6P1J6 1458 aa33.58■■■□□ 2.97
MEIS3-201ENST00000331559 TROQ12816 1431 aaPredicted RBP33.57■■■□□ 2.97
MEIS3-201ENST00000331559 SIN3AQ96ST3 1273 aa33.5■■■□□ 2.95
MEIS3-201ENST00000331559 ADCY10Q96PN6 1610 aa33.5■■■□□ 2.95
MEIS3-201ENST00000331559 ABCA8O94911 1581 aa33.5■■■□□ 2.95
MEIS3-201ENST00000331559 PRG4Q92954 1404 aaPredicted RBP33.46■■■□□ 2.95
MEIS3-201ENST00000331559 ITSN2Q9NZM3 1697 aa33.45■■■□□ 2.95
MEIS3-201ENST00000331559 DNMT1P26358 1616 aaKnown RBP33.45■■■□□ 2.95
MEIS3-201ENST00000331559 DAPK1P53355 1430 aa33.43■■■□□ 2.94
MEIS3-201ENST00000331559 ROCK1Q13464 1354 aa33.43■■■□□ 2.94
MEIS3-201ENST00000331559 RRP7BPQ9NSQ0 103 aa33.41■■■□□ 2.94
MEIS3-201ENST00000331559 CHIC2Q9UKJ5 165 aa33.41■■■□□ 2.94
MEIS3-201ENST00000331559 CHD1O14646 1710 aa33.39■■■□□ 2.94
MEIS3-201ENST00000331559 ABCC5O15440 1437 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms