RNA–Protein interactions for RNA: ENST00000330912.6

TREX2-201, Transcript of three prime repair exonuclease 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TREX2, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2-201ENST00000330912 APLP2Q06481 763 aa27.8■■■□□ 2.04
TREX2-201ENST00000330912 GRIN2BQ13224 1484 aa27.79■■■□□ 2.04
TREX2-201ENST00000330912 P3H3Q8IVL6 736 aa27.76■■■□□ 2.03
TREX2-201ENST00000330912 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
TREX2-201ENST00000330912 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
TREX2-201ENST00000330912 ADAMTS12P58397 1594 aa27.74■■■□□ 2.03
TREX2-201ENST00000330912 FHOD3Q2V2M9 1422 aa27.66■■■□□ 2.02
TREX2-201ENST00000330912 SNAPC4Q5SXM2 1469 aa27.65■■■□□ 2.02
TREX2-201ENST00000330912 KANK4Q5T7N3 995 aaPredicted RBP27.64■■■□□ 2.02
TREX2-201ENST00000330912 EFCAB5A4FU69 1503 aa27.63■■■□□ 2.01
TREX2-201ENST00000330912 SAMD9Q5K651 1589 aa27.54■■■□□ 2
TREX2-201ENST00000330912 PCF11O94913 1555 aaKnown RBP27.53■■■□□ 2
TREX2-201ENST00000330912 IQGAP2Q13576 1575 aa27.5■■□□□ 1.99
TREX2-201ENST00000330912 MAGI1Q96QZ7 1491 aaPredicted RBP27.5■■□□□ 1.99
TREX2-201ENST00000330912 GRIN2AQ12879 1464 aa27.49■■□□□ 1.99
TREX2-201ENST00000330912 ATP1B4Q9UN42 357 aaPredicted RBP27.48■■□□□ 1.99
TREX2-201ENST00000330912 TIAM1Q13009 1591 aa27.47■■□□□ 1.99
TREX2-201ENST00000330912 FBLN2P98095 1184 aa27.44■■□□□ 1.98
TREX2-201ENST00000330912 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
TREX2-201ENST00000330912 SYNJ2O15056 1496 aa27.43■■□□□ 1.98
TREX2-201ENST00000330912 FMN1Q68DA7 1419 aa27.43■■□□□ 1.98
TREX2-201ENST00000330912 CASKIN1Q8WXD9 1431 aa27.41■■□□□ 1.98
TREX2-201ENST00000330912 FYCO1Q9BQS8 1478 aa27.41■■□□□ 1.98
TREX2-201ENST00000330912 MAP3K1Q13233 1512 aa27.41■■□□□ 1.98
TREX2-201ENST00000330912 KIAA0586Q9BVV6 1533 aa27.38■■□□□ 1.97
TREX2-201ENST00000330912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.37■■□□□ 1.97
TREX2-201ENST00000330912 LRRC9Q6ZRR7 1453 aa27.36■■□□□ 1.97
TREX2-201ENST00000330912 HNRNPUL2Q1KMD3 747 aaKnown RBP27.36■■□□□ 1.97
TREX2-201ENST00000330912 CFAP43Q8NDM7 1665 aa27.35■■□□□ 1.97
TREX2-201ENST00000330912 CEP170Q5SW79 1584 aa27.34■■□□□ 1.97
TREX2-201ENST00000330912 UGGT2Q9NYU1 1516 aa27.34■■□□□ 1.97
TREX2-201ENST00000330912 PELP1Q8IZL8 1130 aaKnown RBP27.3■■□□□ 1.96
TREX2-201ENST00000330912 LRRIQ1Q96JM4 1722 aa27.28■■□□□ 1.96
TREX2-201ENST00000330912 DISP1Q96F81 1524 aa27.26■■□□□ 1.95
TREX2-201ENST00000330912 NUP160Q12769 1436 aa27.25■■□□□ 1.95
TREX2-201ENST00000330912 RRBP1Q9P2E9 1410 aaKnown RBP27.24■■□□□ 1.95
TREX2-201ENST00000330912 KIAA0556O60303 1618 aa27.22■■□□□ 1.95
TREX2-201ENST00000330912 CCER1Q8TC90 406 aaPredicted RBP27.21■■□□□ 1.95
TREX2-201ENST00000330912 PHLDB1Q86UU1 1377 aa27.19■■□□□ 1.94
TREX2-201ENST00000330912 CCNB3Q8WWL7 1395 aa27.18■■□□□ 1.94
TREX2-201ENST00000330912 ZEB1P37275 1124 aaPredicted RBP27.17■■□□□ 1.94
TREX2-201ENST00000330912 JPH4Q96JJ6 628 aa27.14■■□□□ 1.94
TREX2-201ENST00000330912 CHD1O14646 1710 aa27.11■■□□□ 1.93
TREX2-201ENST00000330912 MTUS2Q5JR59 1369 aa27.11■■□□□ 1.93
TREX2-201ENST00000330912 HECW1Q76N89 1606 aa27.1■■□□□ 1.93
TREX2-201ENST00000330912 ARID3CA6NKF2 412 aa27.1■■□□□ 1.93
TREX2-201ENST00000330912 EPRSP07814 1512 aaKnown RBP27.06■■□□□ 1.92
TREX2-201ENST00000330912 ITGAEP38570 1179 aa27.06■■□□□ 1.92
TREX2-201ENST00000330912 CCDC18Q5T9S5 1454 aa27.06■■□□□ 1.92
TREX2-201ENST00000330912 MAGI3Q5TCQ9 1506 aa27.05■■□□□ 1.92
TREX2-201ENST00000330912 CDK13Q14004 1512 aaKnown RBP27.05■■□□□ 1.92
TREX2-201ENST00000330912 CARMIL2Q6F5E8 1435 aa27.01■■□□□ 1.91
TREX2-201ENST00000330912 FAM50AQ14320 339 aaKnown RBP26.99■■□□□ 1.91
TREX2-201ENST00000330912 EHBP1L1Q8N3D4 1523 aa26.99■■□□□ 1.91
TREX2-201ENST00000330912 RAPGEF6Q8TEU7 1601 aa26.99■■□□□ 1.91
TREX2-201ENST00000330912 NUP153P49790 1475 aaKnown RBP26.98■■□□□ 1.91
TREX2-201ENST00000330912 NCOA2Q15596 1464 aa26.97■■□□□ 1.91
TREX2-201ENST00000330912 PLB1Q6P1J6 1458 aa26.96■■□□□ 1.91
TREX2-201ENST00000330912 SUPT6HQ7KZ85 1726 aaKnown RBP26.95■■□□□ 1.9
TREX2-201ENST00000330912 PRG4Q92954 1404 aaPredicted RBP26.93■■□□□ 1.9
TREX2-201ENST00000330912 FGD6Q6ZV73 1430 aa26.92■■□□□ 1.9
TREX2-201ENST00000330912 ARHGEF11O15085 1522 aa26.88■■□□□ 1.89
TREX2-201ENST00000330912 MYOM3Q5VTT5 1437 aa26.86■■□□□ 1.89
TREX2-201ENST00000330912 SHROOM2Q13796 1616 aa26.81■■□□□ 1.88
TREX2-201ENST00000330912 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.81■■□□□ 1.88
TREX2-201ENST00000330912 ABCA8O94911 1581 aa26.79■■□□□ 1.88
TREX2-201ENST00000330912 PTPRGP23470 1445 aa26.77■■□□□ 1.88
TREX2-201ENST00000330912 ERCC6L2Q5T890 1561 aa26.77■■□□□ 1.88
TREX2-201ENST00000330912 DHX57Q6P158 1386 aaKnown RBP26.75■■□□□ 1.87
TREX2-201ENST00000330912 RAB3GAP2Q9H2M9 1393 aa26.75■■□□□ 1.87
TREX2-201ENST00000330912 CDK11AQ9UQ88 783 aaPredicted RBP26.74■■□□□ 1.87
TREX2-201ENST00000330912 SCAF1Q9H7N4 1312 aaKnown RBP26.74■■□□□ 1.87
TREX2-201ENST00000330912 PTPN23Q9H3S7 1636 aa26.74■■□□□ 1.87
TREX2-201ENST00000330912 CLASP1Q7Z460 1538 aa26.74■■□□□ 1.87
TREX2-201ENST00000330912 PTPRKQ15262 1439 aa26.71■■□□□ 1.87
TREX2-201ENST00000330912 SETD5Q9C0A6 1442 aa26.71■■□□□ 1.87
TREX2-201ENST00000330912 ATP10BO94823 1461 aa26.69■■□□□ 1.86
TREX2-201ENST00000330912 TROQ12816 1431 aaPredicted RBP26.69■■□□□ 1.86
TREX2-201ENST00000330912 TCOF1Q13428 1488 aaKnown RBP26.64■■□□□ 1.86
TREX2-201ENST00000330912 KIF14Q15058 1648 aa26.63■■□□□ 1.85
TREX2-201ENST00000330912 MIA2Q96PC5 1412 aa26.63■■□□□ 1.85
TREX2-201ENST00000330912 UACAQ9BZF9 1416 aa26.6■■□□□ 1.85
TREX2-201ENST00000330912 PLEKHD1A6NEE1 506 aa26.59■■□□□ 1.85
TREX2-201ENST00000330912 ADCY10Q96PN6 1610 aa26.57■■□□□ 1.84
TREX2-201ENST00000330912 ZNF644Q9H582 1327 aaPredicted RBP26.57■■□□□ 1.84
TREX2-201ENST00000330912 CLSPNQ9HAW4 1339 aa26.54■■□□□ 1.84
TREX2-201ENST00000330912 CHIC2Q9UKJ5 165 aa26.54■■□□□ 1.84
TREX2-201ENST00000330912 HFM1A2PYH4 1435 aa26.53■■□□□ 1.84
TREX2-201ENST00000330912 GPATCH8Q9UKJ3 1502 aaKnown RBP26.52■■□□□ 1.84
TREX2-201ENST00000330912 ABCC2Q92887 1545 aa26.5■■□□□ 1.83
TREX2-201ENST00000330912 NAIPQ13075 1403 aa26.49■■□□□ 1.83
TREX2-201ENST00000330912 CFDP1Q9UEE9 299 aaPredicted RBP26.49■■□□□ 1.83
TREX2-201ENST00000330912 RRP7BPQ9NSQ0 103 aa26.48■■□□□ 1.83
TREX2-201ENST00000330912 MAPKBP1O60336 1514 aa26.47■■□□□ 1.83
TREX2-201ENST00000330912 ITSN2Q9NZM3 1697 aa26.47■■□□□ 1.83
TREX2-201ENST00000330912 ABCC10Q5T3U5 1492 aa26.46■■□□□ 1.83
TREX2-201ENST00000330912 ZNF777Q9ULD5 760 aaPredicted RBP26.44■■□□□ 1.82
TREX2-201ENST00000330912 CDC42BPAQ5VT25 1732 aa26.43■■□□□ 1.82
TREX2-201ENST00000330912 DAPK1P53355 1430 aa26.43■■□□□ 1.82
TREX2-201ENST00000330912 CAMSAP2Q08AD1 1489 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms