RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PRG4Q92954 1404 aaPredicted RBP27.72■■■□□ 2.03
CTHRC1-201ENST00000330295 NPM1P06748 294 aaKnown RBP eCLIP27.71■■■□□ 2.03
CTHRC1-201ENST00000330295 TSPOAP1O95153 1857 aa27.66■■■□□ 2.02
CTHRC1-201ENST00000330295 HECW2Q9P2P5 1572 aa27.65■■■□□ 2.02
CTHRC1-201ENST00000330295 FHAD1B1AJZ9 1412 aa27.64■■■□□ 2.02
CTHRC1-201ENST00000330295 ADGRL1O94910 1474 aa27.63■■■□□ 2.01
CTHRC1-201ENST00000330295 JPH4Q96JJ6 628 aa27.59■■■□□ 2.01
CTHRC1-201ENST00000330295 ADCY10Q96PN6 1610 aa27.58■■■□□ 2.01
CTHRC1-201ENST00000330295 WRNQ14191 1432 aaPredicted RBP eCLIP27.48■■□□□ 1.99
CTHRC1-201ENST00000330295 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
CTHRC1-201ENST00000330295 FBXO41Q8TF61 875 aa27.46■■□□□ 1.99
CTHRC1-201ENST00000330295 RUSC2Q8N2Y8 1516 aa27.42■■□□□ 1.98
CTHRC1-201ENST00000330295 PPRC1Q5VV67 1664 aaKnown RBP27.34■■□□□ 1.97
CTHRC1-201ENST00000330295 GLI2P10070 1586 aa27.25■■□□□ 1.95
CTHRC1-201ENST00000330295 COL17A1Q9UMD9 1497 aaPredicted RBP27.25■■□□□ 1.95
CTHRC1-201ENST00000330295 BIVM-ERCC5R4GMW8 1640 aa27.24■■□□□ 1.95
CTHRC1-201ENST00000330295 TOP2BQ02880 1626 aa27.23■■□□□ 1.95
CTHRC1-201ENST00000330295 PLB1Q6P1J6 1458 aa27.18■■□□□ 1.94
CTHRC1-201ENST00000330295 ASXL2Q76L83 1435 aa27.17■■□□□ 1.94
CTHRC1-201ENST00000330295 ABCC2Q92887 1545 aa27.16■■□□□ 1.94
CTHRC1-201ENST00000330295 KIAA0586Q9BVV6 1533 aa27.14■■□□□ 1.94
CTHRC1-201ENST00000330295 PTPRGP23470 1445 aa27.12■■□□□ 1.93
CTHRC1-201ENST00000330295 LMTK3Q96Q04 1460 aa27.11■■□□□ 1.93
CTHRC1-201ENST00000330295 TEX14Q8IWB6 1497 aa27.07■■□□□ 1.92
CTHRC1-201ENST00000330295 MAP3K4Q9Y6R4 1608 aa27.06■■□□□ 1.92
CTHRC1-201ENST00000330295 CUL7Q14999 1698 aa27.04■■□□□ 1.92
CTHRC1-201ENST00000330295 TTBK1Q5TCY1 1321 aaPredicted RBP27.02■■□□□ 1.92
CTHRC1-201ENST00000330295 EPRSP07814 1512 aaKnown RBP27.01■■□□□ 1.91
CTHRC1-201ENST00000330295 TNIKQ9UKE5 1360 aa26.97■■□□□ 1.91
CTHRC1-201ENST00000330295 UHRF1BP1LA0JNW5 1464 aa26.96■■□□□ 1.91
CTHRC1-201ENST00000330295 CARMIL2Q6F5E8 1435 aa26.91■■□□□ 1.9
CTHRC1-201ENST00000330295 UACAQ9BZF9 1416 aa26.88■■□□□ 1.89
CTHRC1-201ENST00000330295 KDM5BQ9UGL1 1544 aa26.85■■□□□ 1.89
CTHRC1-201ENST00000330295 SOCS7O14512 581 aa26.85■■□□□ 1.89
CTHRC1-201ENST00000330295 KIF21BO75037 1637 aa26.83■■□□□ 1.89
CTHRC1-201ENST00000330295 IGF1RP08069 1367 aa26.81■■□□□ 1.88
CTHRC1-201ENST00000330295 ZCCHC11Q5TAX3 1644 aaKnown RBP26.79■■□□□ 1.88
CTHRC1-201ENST00000330295 ILDR2Q71H61 639 aa26.79■■□□□ 1.88
CTHRC1-201ENST00000330295 PTPRMP28827 1452 aa26.76■■□□□ 1.87
CTHRC1-201ENST00000330295 MAGI3Q5TCQ9 1506 aa26.72■■□□□ 1.87
CTHRC1-201ENST00000330295 WDR7Q9Y4E6 1490 aa26.72■■□□□ 1.87
CTHRC1-201ENST00000330295 DISP3Q9P2K9 1392 aa26.71■■□□□ 1.87
CTHRC1-201ENST00000330295 PCF11O94913 1555 aaKnown RBP26.71■■□□□ 1.87
CTHRC1-201ENST00000330295 IQGAP2Q13576 1575 aa26.71■■□□□ 1.87
CTHRC1-201ENST00000330295 ADAMTSL3P82987 1691 aa26.7■■□□□ 1.86
CTHRC1-201ENST00000330295 CD109Q6YHK3 1445 aa26.68■■□□□ 1.86
CTHRC1-201ENST00000330295 DISP1Q96F81 1524 aa26.68■■□□□ 1.86
CTHRC1-201ENST00000330295 CFAP43Q8NDM7 1665 aa26.66■■□□□ 1.86
CTHRC1-201ENST00000330295 KIF27Q86VH2 1401 aa26.66■■□□□ 1.86
CTHRC1-201ENST00000330295 CARMIL1Q5VZK9 1371 aa26.6■■□□□ 1.85
CTHRC1-201ENST00000330295 CERKQ8TCT0 537 aa26.59■■□□□ 1.85
CTHRC1-201ENST00000330295 ARAP3Q8WWN8 1544 aa26.55■■□□□ 1.84
CTHRC1-201ENST00000330295 KCNH8Q96L42 1107 aa26.52■■□□□ 1.84
CTHRC1-201ENST00000330295 MADDQ8WXG6 1647 aa26.51■■□□□ 1.83
CTHRC1-201ENST00000330295 BCORL1Q5H9F3 1711 aa26.51■■□□□ 1.83
CTHRC1-201ENST00000330295 UGGT2Q9NYU1 1516 aa26.5■■□□□ 1.83
CTHRC1-201ENST00000330295 KIAA0556O60303 1618 aa26.5■■□□□ 1.83
CTHRC1-201ENST00000330295 SUPT5HO00267 1087 aaKnown RBP26.49■■□□□ 1.83
CTHRC1-201ENST00000330295 HSPA2P54652 639 aa26.46■■□□□ 1.83
CTHRC1-201ENST00000330295 SPATA31D1Q6ZQQ2 1576 aa26.42■■□□□ 1.82
CTHRC1-201ENST00000330295 ARID4BQ4LE39 1312 aaPredicted RBP26.39■■□□□ 1.81
CTHRC1-201ENST00000330295 RIMS1Q86UR5 1692 aaKnown RBP26.38■■□□□ 1.81
CTHRC1-201ENST00000330295 SENP3Q9H4L4 574 aaPredicted RBP26.38■■□□□ 1.81
CTHRC1-201ENST00000330295 PHLDB1Q86UU1 1377 aa26.35■■□□□ 1.81
CTHRC1-201ENST00000330295 RAPGEF3O95398 923 aa26.34■■□□□ 1.81
CTHRC1-201ENST00000330295 ABCA8O94911 1581 aa26.33■■□□□ 1.8
CTHRC1-201ENST00000330295 FRMPD1Q5SYB0 1578 aa26.26■■□□□ 1.79
CTHRC1-201ENST00000330295 PLPPR3Q6T4P5 718 aa26.24■■□□□ 1.79
CTHRC1-201ENST00000330295 ABCA9Q8IUA7 1624 aa26.23■■□□□ 1.79
CTHRC1-201ENST00000330295 NEO1Q92859 1461 aa26.23■■□□□ 1.79
CTHRC1-201ENST00000330295 RAPGEF2Q9Y4G8 1499 aa26.22■■□□□ 1.79
CTHRC1-201ENST00000330295 ARHGEF40Q8TER5 1519 aa26.2■■□□□ 1.79
CTHRC1-201ENST00000330295 GOLGA3Q08378 1498 aa26.17■■□□□ 1.78
CTHRC1-201ENST00000330295 POGZQ7Z3K3 1410 aa26.13■■□□□ 1.77
CTHRC1-201ENST00000330295 FANCAO15360 1455 aa26.11■■□□□ 1.77
CTHRC1-201ENST00000330295 ATP10BO94823 1461 aa26.1■■□□□ 1.77
CTHRC1-201ENST00000330295 YEATS2Q9ULM3 1422 aa26.09■■□□□ 1.77
CTHRC1-201ENST00000330295 ARID3CA6NKF2 412 aa26.09■■□□□ 1.77
CTHRC1-201ENST00000330295 PHF23Q9BUL5 403 aaPredicted RBP26.09■■□□□ 1.77
CTHRC1-201ENST00000330295 CTTNBP2Q8WZ74 1663 aa26.09■■□□□ 1.77
CTHRC1-201ENST00000330295 DMRT2Q9Y5R5 561 aa26.07■■□□□ 1.76
CTHRC1-201ENST00000330295 TTC37Q6PGP7 1564 aa26.06■■□□□ 1.76
CTHRC1-201ENST00000330295 RICTORQ6R327 1708 aa26.05■■□□□ 1.76
CTHRC1-201ENST00000330295 PREX1Q8TCU6 1659 aa26.04■■□□□ 1.76
CTHRC1-201ENST00000330295 FER1L4A9Z1Z3 1794 aa26.04■■□□□ 1.76
CTHRC1-201ENST00000330295 STRCQ7RTU9 1775 aa26.04■■□□□ 1.76
CTHRC1-201ENST00000330295 AKNAQ7Z591 1439 aa26.04■■□□□ 1.76
CTHRC1-201ENST00000330295 SIGLEC1Q9BZZ2 1709 aa26.03■■□□□ 1.76
CTHRC1-201ENST00000330295 DENND4BO75064 1496 aaPredicted RBP26.03■■□□□ 1.76
CTHRC1-201ENST00000330295 FHOD3Q2V2M9 1422 aa25.99■■□□□ 1.75
CTHRC1-201ENST00000330295 MLECQ14165 292 aa25.97■■□□□ 1.75
CTHRC1-201ENST00000330295 ZMYM4Q5VZL5 1548 aa25.95■■□□□ 1.74
CTHRC1-201ENST00000330295 ZFYVE16Q7Z3T8 1539 aa25.94■■□□□ 1.74
CTHRC1-201ENST00000330295 EFCAB5A4FU69 1503 aa25.93■■□□□ 1.74
CTHRC1-201ENST00000330295 FAM9AQ8IZU1 332 aaPredicted RBP25.93■■□□□ 1.74
CTHRC1-201ENST00000330295 IQSEC2Q5JU85 1478 aa25.91■■□□□ 1.74
CTHRC1-201ENST00000330295 PTPRTO14522 1441 aa25.89■■□□□ 1.74
CTHRC1-201ENST00000330295 LTBP4Q8N2S1 1624 aa25.89■■□□□ 1.74
CTHRC1-201ENST00000330295 ARHGEF12Q9NZN5 1544 aa25.88■■□□□ 1.73
CTHRC1-201ENST00000330295 CFAP74Q9C0B2 1584 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms