RNA–Protein interactions for RNA: ENST00000325674.11

CAST-202, Transcript of calpastatin, humanhuman

TSL 5 BASIC

Gene CAST, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-202ENST00000325674 PDE4CQ08493 712 aa9.65□□□□□ -0.86
CAST-202ENST00000325674 VSIG10Q8N0Z9 540 aa9.65□□□□□ -0.86
CAST-202ENST00000325674 RBM10P98175 930 aaKnown RBP9.65□□□□□ -0.86
CAST-202ENST00000325674 PDIA4P13667 645 aaKnown RBP9.63□□□□□ -0.87
CAST-202ENST00000325674 PRDM4Q9UKN5 801 aa9.63□□□□□ -0.87
CAST-202ENST00000325674 KIF21BO75037 1637 aa9.62□□□□□ -0.87
CAST-202ENST00000325674 TIMELESSQ9UNS1 1208 aa9.61□□□□□ -0.87
CAST-202ENST00000325674 GSE1Q14687 1217 aa9.6□□□□□ -0.87
CAST-202ENST00000325674 BAZ1AQ9NRL2 1556 aaPredicted RBP9.59□□□□□ -0.87
CAST-202ENST00000325674 RNF123Q5XPI4 1314 aa9.59□□□□□ -0.87
CAST-202ENST00000325674 RRBP1Q9P2E9 1410 aaKnown RBP9.59□□□□□ -0.87
CAST-202ENST00000325674 CALD1Q05682 793 aaKnown RBP9.58□□□□□ -0.88
CAST-202ENST00000325674 WDR97A6NE52 1622 aa9.58□□□□□ -0.88
CAST-202ENST00000325674 ZBTB47Q9UFB7 747 aaPredicted RBP9.58□□□□□ -0.88
CAST-202ENST00000325674 PPM1GO15355 546 aaPredicted RBP9.58□□□□□ -0.88
CAST-202ENST00000325674 VPS8Q8N3P4 1428 aa9.58□□□□□ -0.88
CAST-202ENST00000325674 CEP164Q9UPV0 1460 aa9.57□□□□□ -0.88
CAST-202ENST00000325674 ANP32AP39687 249 aaKnown RBP9.57□□□□□ -0.88
CAST-202ENST00000325674 GOLGA3Q08378 1498 aa9.56□□□□□ -0.88
CAST-202ENST00000325674 ABCC8Q09428 1581 aa9.55□□□□□ -0.88
CAST-202ENST00000325674 NEFMP07197 916 aa9.54□□□□□ -0.88
CAST-202ENST00000325674 CLIP1P30622 1438 aa9.54□□□□□ -0.88
CAST-202ENST00000325674 TAF7LQ5H9L4 462 aa9.53□□□□□ -0.88
CAST-202ENST00000325674 BAZ1BQ9UIG0 1483 aaKnown RBP9.52□□□□□ -0.89
CAST-202ENST00000325674 HSP90AA2PQ14568 343 aaPredicted RBP9.52□□□□□ -0.89
CAST-202ENST00000325674 UNC13AQ9UPW8 1703 aa9.51□□□□□ -0.89
CAST-202ENST00000325674 DCAF11Q8TEB1 546 aa9.51□□□□□ -0.89
CAST-202ENST00000325674 TRIM52Q96A61 297 aa9.5□□□□□ -0.89
CAST-202ENST00000325674 RRAGDQ9NQL2 400 aaPredicted RBP9.5□□□□□ -0.89
CAST-202ENST00000325674 BCL11BQ9C0K0 894 aaPredicted RBP9.5□□□□□ -0.89
CAST-202ENST00000325674 CCDC88BA6NC98 1476 aa9.49□□□□□ -0.89
CAST-202ENST00000325674 RSPH4AQ5TD94 716 aa9.49□□□□□ -0.89
CAST-202ENST00000325674 FRAT1Q92837 279 aaPredicted RBP9.49□□□□□ -0.89
CAST-202ENST00000325674 NCOA2Q15596 1464 aa9.48□□□□□ -0.89
CAST-202ENST00000325674 NCBP3Q53F19 620 aaKnown RBP9.48□□□□□ -0.89
CAST-202ENST00000325674 ARXQ96QS3 562 aa9.48□□□□□ -0.89
CAST-202ENST00000325674 CLCN1P35523 988 aa9.47□□□□□ -0.89
CAST-202ENST00000325674 ABCA5Q8WWZ7 1642 aa9.47□□□□□ -0.89
CAST-202ENST00000325674 SMG6Q86US8 1419 aaKnown RBP9.47□□□□□ -0.89
CAST-202ENST00000325674 HNRNPUL2Q1KMD3 747 aaKnown RBP9.46□□□□□ -0.89
CAST-202ENST00000325674 POLR1AO95602 1720 aaPredicted RBP9.46□□□□□ -0.9
CAST-202ENST00000325674 SYNJ1O43426 1573 aa9.46□□□□□ -0.9
CAST-202ENST00000325674 A0A0U1RQG5 324 aaPredicted RBP9.45□□□□□ -0.9
CAST-202ENST00000325674 ZBED9Q6R2W3 1325 aa9.44□□□□□ -0.9
CAST-202ENST00000325674 VIRMAQ69YN4 1812 aaKnown RBP9.44□□□□□ -0.9
CAST-202ENST00000325674 B4GALNT3Q6L9W6 998 aa9.44□□□□□ -0.9
CAST-202ENST00000325674 PDCL3Q9H2J4 239 aa9.44□□□□□ -0.9
CAST-202ENST00000325674 KDM5BQ9UGL1 1544 aa9.43□□□□□ -0.9
CAST-202ENST00000325674 HSP90AA1P07900 732 aaKnown RBP9.43□□□□□ -0.9
CAST-202ENST00000325674 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
CAST-202ENST00000325674 ANP32CO43423 234 aa9.43□□□□□ -0.9
CAST-202ENST00000325674 MS4A1P11836 297 aa9.42□□□□□ -0.9
CAST-202ENST00000325674 SOGA1O94964 1423 aa9.42□□□□□ -0.9
CAST-202ENST00000325674 DDX10Q13206 875 aaKnown RBP9.41□□□□□ -0.9
CAST-202ENST00000325674 GTF2E1P29083 439 aaPredicted RBP9.41□□□□□ -0.9
CAST-202ENST00000325674 IRX6P78412 446 aaPredicted RBP9.4□□□□□ -0.9
CAST-202ENST00000325674 TOP2AP11388 1531 aaKnown RBP9.4□□□□□ -0.9
CAST-202ENST00000325674 BACH2Q9BYV9 841 aa9.4□□□□□ -0.9
CAST-202ENST00000325674 SCRIBQ14160 1630 aa9.39□□□□□ -0.91
CAST-202ENST00000325674 TCERG1O14776 1098 aaKnown RBP9.38□□□□□ -0.91
CAST-202ENST00000325674 IPO4Q8TEX9 1081 aaKnown RBP9.38□□□□□ -0.91
CAST-202ENST00000325674 WIZO95785 1651 aa9.38□□□□□ -0.91
CAST-202ENST00000325674 TPM2P07951 284 aa9.37□□□□□ -0.91
CAST-202ENST00000325674 KLHL34Q8N239 644 aa9.37□□□□□ -0.91
CAST-202ENST00000325674 LAS1LQ9Y4W2 734 aaKnown RBP9.37□□□□□ -0.91
CAST-202ENST00000325674 DDRGK1Q96HY6 314 aa9.37□□□□□ -0.91
CAST-202ENST00000325674 FHAD1B1AJZ9 1412 aa9.36□□□□□ -0.91
CAST-202ENST00000325674 UTP14CQ5TAP6 766 aaKnown RBP9.36□□□□□ -0.91
CAST-202ENST00000325674 SMAP1Q8IYB5 467 aaPredicted RBP9.36□□□□□ -0.91
CAST-202ENST00000325674 RUSC2Q8N2Y8 1516 aa9.36□□□□□ -0.91
CAST-202ENST00000325674 STAC3Q96MF2 364 aa9.36□□□□□ -0.91
CAST-202ENST00000325674 MROH2BQ7Z745 1585 aa9.36□□□□□ -0.91
CAST-202ENST00000325674 SMARCA4P51532 1647 aa9.35□□□□□ -0.91
CAST-202ENST00000325674 CHRM1P11229 460 aaPredicted RBP9.35□□□□□ -0.91
CAST-202ENST00000325674 HNRNPUQ00839 825 aaKnown RBP eCLIP9.35□□□□□ -0.91
CAST-202ENST00000325674 ZNF326Q5BKZ1 582 aaKnown RBP9.35□□□□□ -0.91
CAST-202ENST00000325674 FSD2A1L4K1 749 aa9.34□□□□□ -0.91
CAST-202ENST00000325674 NAP1L2Q9ULW6 460 aaPredicted RBP9.34□□□□□ -0.91
CAST-202ENST00000325674 TERF1P54274 439 aa9.34□□□□□ -0.91
CAST-202ENST00000325674 EHMT2Q96KQ7 1210 aa9.34□□□□□ -0.91
CAST-202ENST00000325674 VGFO15240 615 aaPredicted RBP9.33□□□□□ -0.92
CAST-202ENST00000325674 MAP3K1Q13233 1512 aa9.33□□□□□ -0.92
CAST-202ENST00000325674 ERICH3Q5RHP9 1530 aa9.33□□□□□ -0.92
CAST-202ENST00000325674 PDE4AP27815 886 aa9.33□□□□□ -0.92
CAST-202ENST00000325674 ARAP1Q96P48 1450 aa9.32□□□□□ -0.92
CAST-202ENST00000325674 PNNQ9H307 717 aaKnown RBP9.32□□□□□ -0.92
CAST-202ENST00000325674 RAB3GAP2Q9H2M9 1393 aa9.31□□□□□ -0.92
CAST-202ENST00000325674 RANGAP1P46060 587 aaPredicted RBP9.31□□□□□ -0.92
CAST-202ENST00000325674 RGS3P49796 1198 aa9.31□□□□□ -0.92
CAST-202ENST00000325674 L1TD1Q5T7N2 865 aaKnown RBP9.31□□□□□ -0.92
CAST-202ENST00000325674 AKNAQ7Z591 1439 aa9.31□□□□□ -0.92
CAST-202ENST00000325674 CNTLNQ9NXG0 1405 aa9.3□□□□□ -0.92
CAST-202ENST00000325674 MYOM3Q5VTT5 1437 aa9.3□□□□□ -0.92
CAST-202ENST00000325674 MAP7D2Q96T17 732 aa9.29□□□□□ -0.92
CAST-202ENST00000325674 CCNB3Q8WWL7 1395 aa9.29□□□□□ -0.92
CAST-202ENST00000325674 BBXQ8WY36 941 aaPredicted RBP9.28□□□□□ -0.92
CAST-202ENST00000325674 NAP1L5Q96NT1 182 aaPredicted RBP9.27□□□□□ -0.92
CAST-202ENST00000325674 PRDM2Q13029 1718 aa9.27□□□□□ -0.92
CAST-202ENST00000325674 SETD5Q9C0A6 1442 aa9.26□□□□□ -0.93
CAST-202ENST00000325674 DMTNQ08495 405 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms