RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 ZRSR1Q15695 479 aaKnown RBP19.16■□□□□ 0.66
NUP98-201ENST00000324932 CHIC2Q9UKJ5 165 aa19.11■□□□□ 0.65
NUP98-201ENST00000324932 NOP58Q9Y2X3 529 aaKnown RBP19.1■□□□□ 0.65
NUP98-201ENST00000324932 KDM2AQ9Y2K7 1162 aa19.08■□□□□ 0.65
NUP98-201ENST00000324932 CASC1Q6TDU7 716 aa19.08■□□□□ 0.64
NUP98-201ENST00000324932 PPP4R2Q9NY27 417 aa19.07■□□□□ 0.64
NUP98-201ENST00000324932 RTN4Q9NQC3 1192 aaKnown RBP19.06■□□□□ 0.64
NUP98-201ENST00000324932 TSPY4P0CV99 314 aa19.06■□□□□ 0.64
NUP98-201ENST00000324932 TSPY10P0CW01 314 aa19.06■□□□□ 0.64
NUP98-201ENST00000324932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.645e-7■■■■□ 19.3
NUP98-201ENST00000324932 LAS1LQ9Y4W2 734 aaKnown RBP19.05■□□□□ 0.64
NUP98-201ENST00000324932 SUPT16HQ9Y5B9 1047 aaKnown RBP19.04■□□□□ 0.64
NUP98-201ENST00000324932 HIRIP3Q9BW71 556 aaPredicted RBP19.03■□□□□ 0.64
NUP98-201ENST00000324932 GOLGA6L6A8MZA4 724 aa18.99■□□□□ 0.63
NUP98-201ENST00000324932 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
NUP98-201ENST00000324932 NRDCO43847 1150 aa18.98■□□□□ 0.63
NUP98-201ENST00000324932 ABCC9O60706 1549 aa18.97■□□□□ 0.63
NUP98-201ENST00000324932 MTUS2Q5JR59 1369 aa18.97■□□□□ 0.63
NUP98-201ENST00000324932 FTSJ3Q8IY81 847 aaKnown RBP18.96■□□□□ 0.63
NUP98-201ENST00000324932 L1TD1Q5T7N2 865 aaKnown RBP18.95■□□□□ 0.62
NUP98-201ENST00000324932 PLCB2Q00722 1185 aa18.93■□□□□ 0.62
NUP98-201ENST00000324932 CDCA8Q53HL2 280 aa18.93■□□□□ 0.62
NUP98-201ENST00000324932 CHAF1AQ13111 956 aaPredicted RBP18.93■□□□□ 0.62
NUP98-201ENST00000324932 NPM1P06748 294 aaKnown RBP eCLIP18.92■□□□□ 0.62
NUP98-201ENST00000324932 CHMP4BQ9H444 224 aaKnown RBP18.91■□□□□ 0.62
NUP98-201ENST00000324932 RGS3P49796 1198 aa18.91■□□□□ 0.62
NUP98-201ENST00000324932 HSP90AB1P08238 724 aaKnown RBP18.89■□□□□ 0.62
NUP98-201ENST00000324932 DEKP35659 375 aaKnown RBP18.89■□□□□ 0.61
NUP98-201ENST00000324932 KNSTRNQ9Y448 316 aa18.89■□□□□ 0.61
NUP98-201ENST00000324932 MSNP26038 577 aaKnown RBP18.88■□□□□ 0.61
NUP98-201ENST00000324932 MS4A1P11836 297 aa18.86■□□□□ 0.61
NUP98-201ENST00000324932 TPRNQ4KMQ1 711 aa18.86■□□□□ 0.61
NUP98-201ENST00000324932 CLIP1P30622 1438 aa18.85■□□□□ 0.61
NUP98-201ENST00000324932 HSCBQ8IWL3 235 aa18.82■□□□□ 0.6
NUP98-201ENST00000324932 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
NUP98-201ENST00000324932 MAPK8IP3Q9UPT6 1336 aa18.8■□□□□ 0.6
NUP98-201ENST00000324932 GOLGA6L4A6NEF3 574 aa18.78■□□□□ 0.6
NUP98-201ENST00000324932 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
NUP98-201ENST00000324932 B4GALNT3Q6L9W6 998 aa18.78■□□□□ 0.6
NUP98-201ENST00000324932 PLPPR3Q6T4P5 718 aa18.78■□□□□ 0.6
NUP98-201ENST00000324932 FRAT1Q92837 279 aaPredicted RBP18.77■□□□□ 0.59
NUP98-201ENST00000324932 CARD11Q9BXL7 1154 aa18.75■□□□□ 0.59
NUP98-201ENST00000324932 SENP3-EIF4A1A0A087X0R7 540 aa18.75■□□□□ 0.59
NUP98-201ENST00000324932 FGD1P98174 961 aa18.75■□□□□ 0.59
NUP98-201ENST00000324932 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
NUP98-201ENST00000324932 RBM19Q9Y4C8 960 aaKnown RBP18.74■□□□□ 0.59
NUP98-201ENST00000324932 A0A0G2JS52 829 aa18.74■□□□□ 0.59
NUP98-201ENST00000324932 NEUROD2Q15784 382 aa18.74■□□□□ 0.59
NUP98-201ENST00000324932 CFAP44Q96MT7 982 aa18.73■□□□□ 0.59
NUP98-201ENST00000324932 ZBTB7CA1YPR0 619 aa18.72■□□□□ 0.59
NUP98-201ENST00000324932 PPP1R15AO75807 674 aaPredicted RBP18.72■□□□□ 0.59
NUP98-201ENST00000324932 C14orf37Q86TY3 774 aa18.72■□□□□ 0.59
NUP98-201ENST00000324932 PTMSP20962 102 aa18.71■□□□□ 0.59
NUP98-201ENST00000324932 RGL3Q3MIN7 710 aa18.71■□□□□ 0.59
NUP98-201ENST00000324932 KCNJ4P48050 445 aa18.7■□□□□ 0.58
NUP98-201ENST00000324932 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
NUP98-201ENST00000324932 MCCP23508 829 aa18.67■□□□□ 0.58
NUP98-201ENST00000324932 DRC7Q8IY82 874 aa18.67■□□□□ 0.58
NUP98-201ENST00000324932 CCER2I3L3R5 266 aa18.66■□□□□ 0.58
NUP98-201ENST00000324932 KIAA2012Q0VF49 1180 aa18.66■□□□□ 0.58
NUP98-201ENST00000324932 EEA1Q15075 1411 aa18.66■□□□□ 0.58
NUP98-201ENST00000324932 OS9Q13438 667 aaPredicted RBP18.65■□□□□ 0.58
NUP98-201ENST00000324932 GBP4Q96PP9 640 aa18.65■□□□□ 0.58
NUP98-201ENST00000324932 CEP162Q5TB80 1403 aa18.63■□□□□ 0.57
NUP98-201ENST00000324932 TULP1O00294 542 aaPredicted RBP18.62■□□□□ 0.57
NUP98-201ENST00000324932 AMER1Q5JTC6 1135 aaPredicted RBP18.62■□□□□ 0.57
NUP98-201ENST00000324932 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
NUP98-201ENST00000324932 ARID4BQ4LE39 1312 aaPredicted RBP18.6■□□□□ 0.57
NUP98-201ENST00000324932 NAP1L2Q9ULW6 460 aaPredicted RBP18.6■□□□□ 0.57
NUP98-201ENST00000324932 PLEKHD1A6NEE1 506 aa18.59■□□□□ 0.57
NUP98-201ENST00000324932 TIMELESSQ9UNS1 1208 aa18.59■□□□□ 0.57
NUP98-201ENST00000324932 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
NUP98-201ENST00000324932 TNNT3P45378 269 aaPredicted RBP18.58■□□□□ 0.56
NUP98-201ENST00000324932 TAOK2Q9UL54 1235 aa18.57■□□□□ 0.56
NUP98-201ENST00000324932 TCERG1O14776 1098 aaKnown RBP18.56■□□□□ 0.56
NUP98-201ENST00000324932 ZCCHC6Q5VYS8 1495 aaKnown RBP18.56■□□□□ 0.56
NUP98-201ENST00000324932 SPRYD3Q8NCJ5 442 aa18.56■□□□□ 0.56
NUP98-201ENST00000324932 HAP1P54257 671 aaPredicted RBP18.55■□□□□ 0.56
NUP98-201ENST00000324932 CC2D1BQ5T0F9 858 aaKnown RBP18.55■□□□□ 0.56
NUP98-201ENST00000324932 PLEKHG5O94827 1062 aa18.55■□□□□ 0.56
NUP98-201ENST00000324932 SIN3AQ96ST3 1273 aa18.54■□□□□ 0.56
NUP98-201ENST00000324932 SYAP1Q96A49 352 aaPredicted RBP18.54■□□□□ 0.56
NUP98-201ENST00000324932 U2SURPO15042 1029 aaKnown RBP18.54■□□□□ 0.56
NUP98-201ENST00000324932 GOLGA6L3A6NEY3 463 aa18.53■□□□□ 0.56
NUP98-201ENST00000324932 CFDP1Q9UEE9 299 aaPredicted RBP18.53■□□□□ 0.56
NUP98-201ENST00000324932 SCRIBQ14160 1630 aa18.52■□□□□ 0.56
NUP98-201ENST00000324932 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.56
NUP98-201ENST00000324932 TMF1P82094 1093 aa18.51■□□□□ 0.55
NUP98-201ENST00000324932 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
NUP98-201ENST00000324932 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
NUP98-201ENST00000324932 POGKQ9P215 609 aa18.49■□□□□ 0.55
NUP98-201ENST00000324932 GZF1Q9H116 711 aaPredicted RBP18.48■□□□□ 0.55
NUP98-201ENST00000324932 TNIKQ9UKE5 1360 aa18.48■□□□□ 0.55
NUP98-201ENST00000324932 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.47■□□□□ 0.55
NUP98-201ENST00000324932 SLKQ9H2G2 1235 aaPredicted RBP18.47■□□□□ 0.55
NUP98-201ENST00000324932 IPO8O15397 1037 aaKnown RBP18.47■□□□□ 0.55
NUP98-201ENST00000324932 IPO9Q96P70 1041 aaKnown RBP18.47■□□□□ 0.55
NUP98-201ENST00000324932 RWDD1Q9H446 243 aaPredicted RBP18.46■□□□□ 0.55
NUP98-201ENST00000324932 GOLGA2Q08379 1002 aa18.45■□□□□ 0.54
NUP98-201ENST00000324932 KIAA1211Q6ZU35 1233 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms