RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 C14orf37Q86TY3 774 aa11.78□□□□□ -0.52
SH3TC2-201ENST00000323829 ARID4BQ4LE39 1312 aaPredicted RBP11.77□□□□□ -0.53
SH3TC2-201ENST00000323829 CHMP7Q8WUX9 453 aaPredicted RBP11.76□□□□□ -0.53
SH3TC2-201ENST00000323829 ANP32EQ9BTT0 268 aa11.75□□□□□ -0.53
SH3TC2-201ENST00000323829 ISY1Q9ULR0 285 aaKnown RBP11.75□□□□□ -0.53
SH3TC2-201ENST00000323829 NOC3LQ8WTT2 800 aaKnown RBP11.74□□□□□ -0.53
SH3TC2-201ENST00000323829 CCDC180Q9P1Z9 1646 aa11.74□□□□□ -0.53
SH3TC2-201ENST00000323829 ERICH6BQ5W0A0 696 aa11.73□□□□□ -0.53
SH3TC2-201ENST00000323829 HAP1P54257 671 aaPredicted RBP11.72□□□□□ -0.53
SH3TC2-201ENST00000323829 MYO15BQ96JP2 1530 aa11.72□□□□□ -0.53
SH3TC2-201ENST00000323829 NAP1L5Q96NT1 182 aaPredicted RBP11.71□□□□□ -0.53
SH3TC2-201ENST00000323829 MYH16Q9H6N6 1097 aa11.71□□□□□ -0.53
SH3TC2-201ENST00000323829 NAP1L2Q9ULW6 460 aaPredicted RBP11.7□□□□□ -0.54
SH3TC2-201ENST00000323829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.69□□□□□ -0.54
SH3TC2-201ENST00000323829 FKBP8Q14318 412 aa11.68□□□□□ -0.54
SH3TC2-201ENST00000323829 SCRIBQ14160 1630 aa11.67□□□□□ -0.54
SH3TC2-201ENST00000323829 CALRP27797 417 aaKnown RBP11.67□□□□□ -0.54
SH3TC2-201ENST00000323829 MIER1Q8N108 512 aa11.65□□□□□ -0.54
SH3TC2-201ENST00000323829 A0A0U1RQG5 324 aaPredicted RBP11.65□□□□□ -0.54
SH3TC2-201ENST00000323829 RTN4Q9NQC3 1192 aaKnown RBP11.64□□□□□ -0.55
SH3TC2-201ENST00000323829 ARID3AQ99856 593 aa11.64□□□□□ -0.55
SH3TC2-201ENST00000323829 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.64□□□□□ -0.55
SH3TC2-201ENST00000323829 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
SH3TC2-201ENST00000323829 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
SH3TC2-201ENST00000323829 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
SH3TC2-201ENST00000323829 KCNH8Q96L42 1107 aa11.63□□□□□ -0.55
SH3TC2-201ENST00000323829 ERCC6Q03468 1493 aa11.62□□□□□ -0.55
SH3TC2-201ENST00000323829 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.62□□□□□ -0.55
SH3TC2-201ENST00000323829 PATL2C9JE40 543 aaKnown RBP11.61□□□□□ -0.55
SH3TC2-201ENST00000323829 GOLGA6L22H0YM25 854 aa11.6□□□□□ -0.55
SH3TC2-201ENST00000323829 GOLGA2Q08379 1002 aa11.6□□□□□ -0.55
SH3TC2-201ENST00000323829 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
SH3TC2-201ENST00000323829 KIAA2012Q0VF49 1180 aa11.59□□□□□ -0.55
SH3TC2-201ENST00000323829 TNNT3P45378 269 aaPredicted RBP11.57□□□□□ -0.56
SH3TC2-201ENST00000323829 FAM9BQ8IZU0 186 aa11.57□□□□□ -0.56
SH3TC2-201ENST00000323829 FGD1P98174 961 aa11.56□□□□□ -0.56
SH3TC2-201ENST00000323829 DRC7Q8IY82 874 aa11.55□□□□□ -0.56
SH3TC2-201ENST00000323829 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
SH3TC2-201ENST00000323829 TSPY4P0CV99 314 aa11.53□□□□□ -0.56
SH3TC2-201ENST00000323829 TSPY10P0CW01 314 aa11.53□□□□□ -0.56
SH3TC2-201ENST00000323829 CNKSR2Q8WXI2 1034 aa11.52□□□□□ -0.57
SH3TC2-201ENST00000323829 CASC1Q6TDU7 716 aa11.51□□□□□ -0.57
SH3TC2-201ENST00000323829 BECN1Q14457 450 aa11.5□□□□□ -0.57
SH3TC2-201ENST00000323829 WDR43Q15061 677 aaKnown RBP eCLIP11.5□□□□□ -0.57
SH3TC2-201ENST00000323829 NRDCO43847 1150 aa11.5□□□□□ -0.57
SH3TC2-201ENST00000323829 L1TD1Q5T7N2 865 aaKnown RBP11.5□□□□□ -0.57
SH3TC2-201ENST00000323829 AEBP2Q6ZN18 517 aaPredicted RBP11.5□□□□□ -0.57
SH3TC2-201ENST00000323829 CSRNP3Q8WYN3 585 aa11.49□□□□□ -0.57
SH3TC2-201ENST00000323829 CHAF1AQ13111 956 aaPredicted RBP11.49□□□□□ -0.57
SH3TC2-201ENST00000323829 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
SH3TC2-201ENST00000323829 CHIC2Q9UKJ5 165 aa11.48□□□□□ -0.57
SH3TC2-201ENST00000323829 APPP05067 770 aa11.48□□□□□ -0.57
SH3TC2-201ENST00000323829 SUPT16HQ9Y5B9 1047 aaKnown RBP11.48□□□□□ -0.57
SH3TC2-201ENST00000323829 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
SH3TC2-201ENST00000323829 IRX6P78412 446 aaPredicted RBP11.47□□□□□ -0.57
SH3TC2-201ENST00000323829 KCNJ4P48050 445 aa11.46□□□□□ -0.57
SH3TC2-201ENST00000323829 HNRNPUQ00839 825 aaKnown RBP eCLIP11.46□□□□□ -0.58
SH3TC2-201ENST00000323829 OS9Q13438 667 aaPredicted RBP11.45□□□□□ -0.58
SH3TC2-201ENST00000323829 GNL2Q13823 731 aaKnown RBP11.44□□□□□ -0.58
SH3TC2-201ENST00000323829 LAS1LQ9Y4W2 734 aaKnown RBP11.44□□□□□ -0.58
SH3TC2-201ENST00000323829 DDX10Q13206 875 aaKnown RBP11.43□□□□□ -0.58
SH3TC2-201ENST00000323829 CREBRFQ8IUR6 639 aa11.43□□□□□ -0.58
SH3TC2-201ENST00000323829 GOLGA6L4A6NEF3 574 aa11.43□□□□□ -0.58
SH3TC2-201ENST00000323829 KDM2AQ9Y2K7 1162 aa11.43□□□□□ -0.58
SH3TC2-201ENST00000323829 PLEKHD1A6NEE1 506 aa11.42□□□□□ -0.58
SH3TC2-201ENST00000323829 RB1CC1Q8TDY2 1594 aa11.41□□□□□ -0.58
SH3TC2-201ENST00000323829 PPM1GO15355 546 aaPredicted RBP11.41□□□□□ -0.58
SH3TC2-201ENST00000323829 ZCCHC6Q5VYS8 1495 aaKnown RBP11.41□□□□□ -0.58
SH3TC2-201ENST00000323829 MLECQ14165 292 aa11.41□□□□□ -0.58
SH3TC2-201ENST00000323829 GOLGA6L1Q8N7Z2 621 aa11.39□□□□□ -0.59
SH3TC2-201ENST00000323829 TMC1Q8TDI8 760 aa11.39□□□□□ -0.59
SH3TC2-201ENST00000323829 CEP89Q96ST8 783 aa11.39□□□□□ -0.59
SH3TC2-201ENST00000323829 SENP3-EIF4A1A0A087X0R7 540 aa11.39□□□□□ -0.59
SH3TC2-201ENST00000323829 HSP90AB1P08238 724 aaKnown RBP11.38□□□□□ -0.59
SH3TC2-201ENST00000323829 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
SH3TC2-201ENST00000323829 VPS53Q5VIR6 699 aa11.37□□□□□ -0.59
SH3TC2-201ENST00000323829 MSNP26038 577 aaKnown RBP11.37□□□□□ -0.59
SH3TC2-201ENST00000323829 SETQ01105 290 aaPredicted RBP11.36□□□□□ -0.59
SH3TC2-201ENST00000323829 MTUS2Q5JR59 1369 aa11.36□□□□□ -0.59
SH3TC2-201ENST00000323829 TONSLQ96HA7 1378 aa11.34□□□□□ -0.59
SH3TC2-201ENST00000323829 PTMSP20962 102 aa11.34□□□□□ -0.59
SH3TC2-201ENST00000323829 VSIG10Q8N0Z9 540 aa11.34□□□□□ -0.59
SH3TC2-201ENST00000323829 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
SH3TC2-201ENST00000323829 RRP12Q5JTH9 1297 aaKnown RBP11.33□□□□□ -0.6
SH3TC2-201ENST00000323829 AK7Q96M32 723 aa11.33□□□□□ -0.6
SH3TC2-201ENST00000323829 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
SH3TC2-201ENST00000323829 RBM19Q9Y4C8 960 aaKnown RBP11.33□□□□□ -0.6
SH3TC2-201ENST00000323829 FTSJ3Q8IY81 847 aaKnown RBP11.32□□□□□ -0.6
SH3TC2-201ENST00000323829 TMX4Q9H1E5 349 aaPredicted RBP11.3□□□□□ -0.6
SH3TC2-201ENST00000323829 G3V3G9 751 aa11.29□□□□□ -0.6
SH3TC2-201ENST00000323829 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
SH3TC2-201ENST00000323829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.29□□□□□ -0.6
SH3TC2-201ENST00000323829 HSP90B1P14625 803 aaKnown RBP11.29□□□□□ -0.6
SH3TC2-201ENST00000323829 DEKP35659 375 aaKnown RBP11.28□□□□□ -0.6
SH3TC2-201ENST00000323829 RASSF8Q8NHQ8 419 aa11.27□□□□□ -0.61
SH3TC2-201ENST00000323829 POGKQ9P215 609 aa11.27□□□□□ -0.61
SH3TC2-201ENST00000323829 RGL3Q3MIN7 710 aa11.26□□□□□ -0.61
SH3TC2-201ENST00000323829 ZNF330Q9Y3S2 320 aaPredicted RBP11.26□□□□□ -0.61
SH3TC2-201ENST00000323829 NOP58Q9Y2X3 529 aaKnown RBP11.25□□□□□ -0.61
SH3TC2-201ENST00000323829 PES1O00541 588 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms