RNA–Protein interactions for RNA: ENST00000323180.10

PHF21A-201, Transcript of PHD finger protein 21A, humanhuman

TSL 1 (best) BASIC

Gene PHF21A, Length 3,675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF21A-201ENST00000323180 PEG3Q9GZU2 1588 aa11.77□□□□□ -0.53
PHF21A-201ENST00000323180 FAM50AQ14320 339 aaKnown RBP11.76□□□□□ -0.53
PHF21A-201ENST00000323180 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
PHF21A-201ENST00000323180 KIF27Q86VH2 1401 aa11.75□□□□□ -0.53
PHF21A-201ENST00000323180 SIN3AQ96ST3 1273 aa11.74□□□□□ -0.53
PHF21A-201ENST00000323180 ERICH6BQ5W0A0 696 aa11.74□□□□□ -0.53
PHF21A-201ENST00000323180 HNRNPUQ00839 825 aaKnown RBP eCLIP11.72□□□□□ -0.53
PHF21A-201ENST00000323180 MAPKBP1O60336 1514 aa11.72□□□□□ -0.53
PHF21A-201ENST00000323180 WDR97A6NE52 1622 aa11.71□□□□□ -0.53
PHF21A-201ENST00000323180 TONSLQ96HA7 1378 aa11.71□□□□□ -0.53
PHF21A-201ENST00000323180 ATAD2BQ9ULI0 1458 aa11.71□□□□□ -0.54
PHF21A-201ENST00000323180 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
PHF21A-201ENST00000323180 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
PHF21A-201ENST00000323180 PPP4R2Q9NY27 417 aa11.68□□□□□ -0.54
PHF21A-201ENST00000323180 ARHGAP35Q9NRY4 1499 aa11.67□□□□□ -0.54
PHF21A-201ENST00000323180 ATP1B4Q9UN42 357 aaPredicted RBP11.67□□□□□ -0.54
PHF21A-201ENST00000323180 BIVM-ERCC5R4GMW8 1640 aa11.67□□□□□ -0.54
PHF21A-201ENST00000323180 MAP3K1Q13233 1512 aa11.66□□□□□ -0.54
PHF21A-201ENST00000323180 IRX6P78412 446 aaPredicted RBP11.65□□□□□ -0.54
PHF21A-201ENST00000323180 FHAD1B1AJZ9 1412 aa11.63□□□□□ -0.55
PHF21A-201ENST00000323180 TIAM1Q13009 1591 aa11.63□□□□□ -0.55
PHF21A-201ENST00000323180 DEKP35659 375 aaKnown RBP11.63□□□□□ -0.55
PHF21A-201ENST00000323180 LRRC9Q6ZRR7 1453 aa11.61□□□□□ -0.55
PHF21A-201ENST00000323180 RTL5Q5HYW3 569 aaPredicted RBP11.6□□□□□ -0.55
PHF21A-201ENST00000323180 PHLDB1Q86UU1 1377 aa11.59□□□□□ -0.55
PHF21A-201ENST00000323180 NOP58Q9Y2X3 529 aaKnown RBP11.58□□□□□ -0.56
PHF21A-201ENST00000323180 BICRAQ9NZM4 1560 aa11.58□□□□□ -0.56
PHF21A-201ENST00000323180 ANP32AP39687 249 aaKnown RBP11.56□□□□□ -0.56
PHF21A-201ENST00000323180 ANO8Q9HCE9 1232 aaPredicted RBP11.55□□□□□ -0.56
PHF21A-201ENST00000323180 SLC24A1O60721 1099 aa11.55□□□□□ -0.56
PHF21A-201ENST00000323180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.55□□□□□ -0.567e-9■□□□□ 11
PHF21A-201ENST00000323180 CUX1P39880 1505 aa11.54□□□□□ -0.56
PHF21A-201ENST00000323180 CARMIL1Q5VZK9 1371 aa11.53□□□□□ -0.56
PHF21A-201ENST00000323180 B4GALNT3Q6L9W6 998 aa11.53□□□□□ -0.56
PHF21A-201ENST00000323180 EIF4G2P78344 907 aaKnown RBP eCLIP11.53□□□□□ -0.562e-6■■■■□ 21.8
PHF21A-201ENST00000323180 NBR1Q14596 966 aa11.53□□□□□ -0.56
PHF21A-201ENST00000323180 P3H3Q8IVL6 736 aa11.52□□□□□ -0.56
PHF21A-201ENST00000323180 FAM9BQ8IZU0 186 aa11.51□□□□□ -0.57
PHF21A-201ENST00000323180 MRS2Q9HD23 443 aa11.51□□□□□ -0.57
PHF21A-201ENST00000323180 UACAQ9BZF9 1416 aa11.5□□□□□ -0.57
PHF21A-201ENST00000323180 IGF1RP08069 1367 aa11.5□□□□□ -0.57
PHF21A-201ENST00000323180 CCDC18Q5T9S5 1454 aa11.5□□□□□ -0.57
PHF21A-201ENST00000323180 ZBTB47Q9UFB7 747 aaPredicted RBP11.5□□□□□ -0.57
PHF21A-201ENST00000323180 HSPA5P11021 654 aaKnown RBP11.49□□□□□ -0.57
PHF21A-201ENST00000323180 ZBED9Q6R2W3 1325 aa11.48□□□□□ -0.57
PHF21A-201ENST00000323180 UBE2Q2Q8WVN8 375 aa11.48□□□□□ -0.57
PHF21A-201ENST00000323180 CCDC136Q96JN2 1154 aa11.47□□□□□ -0.57
PHF21A-201ENST00000323180 MTUS2Q5JR59 1369 aa11.47□□□□□ -0.57
PHF21A-201ENST00000323180 CFAP43Q8NDM7 1665 aa11.46□□□□□ -0.58
PHF21A-201ENST00000323180 CNTLNQ9NXG0 1405 aa11.45□□□□□ -0.58
PHF21A-201ENST00000323180 FGD6Q6ZV73 1430 aa11.45□□□□□ -0.58
PHF21A-201ENST00000323180 WASHC2AQ641Q2 1341 aa11.45□□□□□ -0.58
PHF21A-201ENST00000323180 FYCO1Q9BQS8 1478 aa11.45□□□□□ -0.58
PHF21A-201ENST00000323180 IPO9Q96P70 1041 aaKnown RBP11.45□□□□□ -0.58
PHF21A-201ENST00000323180 HFM1A2PYH4 1435 aa11.45□□□□□ -0.58
PHF21A-201ENST00000323180 FMN1Q68DA7 1419 aa11.45□□□□□ -0.58
PHF21A-201ENST00000323180 PRKRIP1Q9H875 184 aaPredicted RBP11.44□□□□□ -0.58
PHF21A-201ENST00000323180 PCF11O94913 1555 aaKnown RBP11.43□□□□□ -0.58
PHF21A-201ENST00000323180 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
PHF21A-201ENST00000323180 CFTRP13569 1480 aa11.42□□□□□ -0.58
PHF21A-201ENST00000323180 SALL2Q9Y467 1007 aaPredicted RBP11.42□□□□□ -0.58
PHF21A-201ENST00000323180 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
PHF21A-201ENST00000323180 HMGXB3Q12766 1538 aa11.41□□□□□ -0.58
PHF21A-201ENST00000323180 NCAPD3P42695 1498 aa11.41□□□□□ -0.58
PHF21A-201ENST00000323180 FHOD3Q2V2M9 1422 aa11.41□□□□□ -0.58
PHF21A-201ENST00000323180 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
PHF21A-201ENST00000323180 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.589e-7■■■□□ 16.7
PHF21A-201ENST00000323180 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
PHF21A-201ENST00000323180 EFCAB5A4FU69 1503 aa11.39□□□□□ -0.59
PHF21A-201ENST00000323180 CCDC7Q96M83 1385 aa11.38□□□□□ -0.59
PHF21A-201ENST00000323180 PTPN23Q9H3S7 1636 aa11.38□□□□□ -0.59
PHF21A-201ENST00000323180 NUDCQ9Y266 331 aa11.38□□□□□ -0.59
PHF21A-201ENST00000323180 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
PHF21A-201ENST00000323180 CCDC184Q52MB2 194 aa11.37□□□□□ -0.59
PHF21A-201ENST00000323180 NAIPQ13075 1403 aa11.37□□□□□ -0.59
PHF21A-201ENST00000323180 RRP7BPQ9NSQ0 103 aa11.36□□□□□ -0.59
PHF21A-201ENST00000323180 SMG6Q86US8 1419 aaKnown RBP11.36□□□□□ -0.59
PHF21A-201ENST00000323180 MYOM3Q5VTT5 1437 aa11.35□□□□□ -0.59
PHF21A-201ENST00000323180 USP35Q9P2H5 1018 aa11.34□□□□□ -0.59
PHF21A-201ENST00000323180 PPM1GO15355 546 aaPredicted RBP11.33□□□□□ -0.59
PHF21A-201ENST00000323180 L3MBTL2Q969R5 705 aa11.33□□□□□ -0.59
PHF21A-201ENST00000323180 NCOA1Q15788 1441 aa11.33□□□□□ -0.6
PHF21A-201ENST00000323180 NPM2Q86SE8 214 aaKnown RBP11.33□□□□□ -0.6
PHF21A-201ENST00000323180 CHIC2Q9UKJ5 165 aa11.33□□□□□ -0.6
PHF21A-201ENST00000323180 AEBP2Q6ZN18 517 aaPredicted RBP11.33□□□□□ -0.6
PHF21A-201ENST00000323180 POLR3GLQ9BT43 218 aa11.33□□□□□ -0.6
PHF21A-201ENST00000323180 TCERG1O14776 1098 aaKnown RBP11.31□□□□□ -0.6
PHF21A-201ENST00000323180 MPHOSPH9Q99550 1183 aa11.31□□□□□ -0.6
PHF21A-201ENST00000323180 PTPRKQ15262 1439 aa11.31□□□□□ -0.6
PHF21A-201ENST00000323180 NEFMP07197 916 aa11.31□□□□□ -0.6
PHF21A-201ENST00000323180 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
PHF21A-201ENST00000323180 TMC1Q8TDI8 760 aa11.3□□□□□ -0.6
PHF21A-201ENST00000323180 AKNAQ7Z591 1439 aa11.29□□□□□ -0.6
PHF21A-201ENST00000323180 DAXXQ9UER7 740 aaPredicted RBP11.29□□□□□ -0.6
PHF21A-201ENST00000323180 KDM5BQ9UGL1 1544 aa11.29□□□□□ -0.6
PHF21A-201ENST00000323180 CADPSQ9ULU8 1353 aa11.29□□□□□ -0.6
PHF21A-201ENST00000323180 KIF7Q2M1P5 1343 aa11.28□□□□□ -0.6
PHF21A-201ENST00000323180 DDRGK1Q96HY6 314 aa11.28□□□□□ -0.6
PHF21A-201ENST00000323180 C11orf95C9JLR9 678 aaPredicted RBP11.27□□□□□ -0.6
PHF21A-201ENST00000323180 RNF123Q5XPI4 1314 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms