RNA–Protein interactions for RNA: ENST00000321256.9

NCBP2-201, Transcript of nuclear cap binding protein subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCBP2, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-201ENST00000321256 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.656e-6■□□□□ 8.5
NCBP2-201ENST00000321256 CTTNBP2Q8WZ74 1663 aa19.08■□□□□ 0.64
NCBP2-201ENST00000321256 CCER1Q8TC90 406 aaPredicted RBP19.08■□□□□ 0.64
NCBP2-201ENST00000321256 FHOD3Q2V2M9 1422 aa19.06■□□□□ 0.64
NCBP2-201ENST00000321256 IFT140Q96RY7 1462 aa19.05■□□□□ 0.64
NCBP2-201ENST00000321256 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
NCBP2-201ENST00000321256 PBRM1Q86U86 1689 aa19.05■□□□□ 0.64
NCBP2-201ENST00000321256 ZNF608Q9ULD9 1512 aaPredicted RBP19.04■□□□□ 0.64
NCBP2-201ENST00000321256 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
NCBP2-201ENST00000321256 EFCAB5A4FU69 1503 aa19.02■□□□□ 0.63
NCBP2-201ENST00000321256 GRIN2BQ13224 1484 aa19■□□□□ 0.63
NCBP2-201ENST00000321256 ATP1B4Q9UN42 357 aaPredicted RBP18.99■□□□□ 0.63
NCBP2-201ENST00000321256 PCF11O94913 1555 aaKnown RBP18.98■□□□□ 0.63
NCBP2-201ENST00000321256 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
NCBP2-201ENST00000321256 TIAM1Q13009 1591 aa18.96■□□□□ 0.63
NCBP2-201ENST00000321256 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
NCBP2-201ENST00000321256 EIF4G3O43432 1585 aaKnown RBP18.92■□□□□ 0.62
NCBP2-201ENST00000321256 SAMD9Q5K651 1589 aa18.91■□□□□ 0.62
NCBP2-201ENST00000321256 FMN1Q68DA7 1419 aa18.9■□□□□ 0.62
NCBP2-201ENST00000321256 FYCO1Q9BQS8 1478 aa18.9■□□□□ 0.62
NCBP2-201ENST00000321256 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
NCBP2-201ENST00000321256 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
NCBP2-201ENST00000321256 CASKIN1Q8WXD9 1431 aa18.89■□□□□ 0.61
NCBP2-201ENST00000321256 RRBP1Q9P2E9 1410 aaKnown RBP18.88■□□□□ 0.61
NCBP2-201ENST00000321256 CFAP43Q8NDM7 1665 aa18.86■□□□□ 0.61
NCBP2-201ENST00000321256 IQGAP2Q13576 1575 aa18.85■□□□□ 0.61
NCBP2-201ENST00000321256 CCNB3Q8WWL7 1395 aa18.85■□□□□ 0.61
NCBP2-201ENST00000321256 PHLDB1Q86UU1 1377 aa18.8■□□□□ 0.6
NCBP2-201ENST00000321256 GRIN2AQ12879 1464 aa18.79■□□□□ 0.6
NCBP2-201ENST00000321256 ITGAEP38570 1179 aa18.79■□□□□ 0.6
NCBP2-201ENST00000321256 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.6
NCBP2-201ENST00000321256 FBLN2P98095 1184 aa18.77■□□□□ 0.6
NCBP2-201ENST00000321256 CHMP7Q8WUX9 453 aaPredicted RBP18.77■□□□□ 0.6
NCBP2-201ENST00000321256 KIAA0586Q9BVV6 1533 aa18.75■□□□□ 0.59
NCBP2-201ENST00000321256 SYNJ2O15056 1496 aa18.73■□□□□ 0.59
NCBP2-201ENST00000321256 UGGT2Q9NYU1 1516 aa18.73■□□□□ 0.59
NCBP2-201ENST00000321256 MTUS2Q5JR59 1369 aa18.73■□□□□ 0.59
NCBP2-201ENST00000321256 LRRIQ1Q96JM4 1722 aa18.72■□□□□ 0.59
NCBP2-201ENST00000321256 FAM50AQ14320 339 aaKnown RBP18.71■□□□□ 0.59
NCBP2-201ENST00000321256 CEP170Q5SW79 1584 aa18.67■□□□□ 0.58
NCBP2-201ENST00000321256 DISP1Q96F81 1524 aa18.67■□□□□ 0.58
NCBP2-201ENST00000321256 KIAA0556O60303 1618 aa18.66■□□□□ 0.58
NCBP2-201ENST00000321256 ARID3CA6NKF2 412 aa18.65■□□□□ 0.58
NCBP2-201ENST00000321256 HECW1Q76N89 1606 aa18.65■□□□□ 0.58
NCBP2-201ENST00000321256 CCDC18Q5T9S5 1454 aa18.64■□□□□ 0.57
NCBP2-201ENST00000321256 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
NCBP2-201ENST00000321256 EPRSP07814 1512 aaKnown RBP18.61■□□□□ 0.57
NCBP2-201ENST00000321256 EHBP1L1Q8N3D4 1523 aa18.61■□□□□ 0.57
NCBP2-201ENST00000321256 NUP160Q12769 1436 aa18.61■□□□□ 0.57
NCBP2-201ENST00000321256 NCOA2Q15596 1464 aa18.61■□□□□ 0.57
NCBP2-201ENST00000321256 MAGI3Q5TCQ9 1506 aa18.6■□□□□ 0.57
NCBP2-201ENST00000321256 CDK13Q14004 1512 aaKnown RBP18.6■□□□□ 0.57
NCBP2-201ENST00000321256 FGD6Q6ZV73 1430 aa18.6■□□□□ 0.57
NCBP2-201ENST00000321256 CHD1O14646 1710 aa18.58■□□□□ 0.57
NCBP2-201ENST00000321256 SUPT6HQ7KZ85 1726 aaKnown RBP18.57■□□□□ 0.56
NCBP2-201ENST00000321256 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
NCBP2-201ENST00000321256 JPH4Q96JJ6 628 aa18.57■□□□□ 0.56
NCBP2-201ENST00000321256 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
NCBP2-201ENST00000321256 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.54■□□□□ 0.56
NCBP2-201ENST00000321256 SETD5Q9C0A6 1442 aa18.54■□□□□ 0.56
NCBP2-201ENST00000321256 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.56
NCBP2-201ENST00000321256 CARMIL2Q6F5E8 1435 aa18.52■□□□□ 0.56
NCBP2-201ENST00000321256 CLSPNQ9HAW4 1339 aa18.52■□□□□ 0.56
NCBP2-201ENST00000321256 RAPGEF6Q8TEU7 1601 aa18.51■□□□□ 0.55
NCBP2-201ENST00000321256 ARHGEF11O15085 1522 aa18.5■□□□□ 0.55
NCBP2-201ENST00000321256 PLB1Q6P1J6 1458 aa18.49■□□□□ 0.55
NCBP2-201ENST00000321256 PTPN23Q9H3S7 1636 aa18.45■□□□□ 0.54
NCBP2-201ENST00000321256 PTPRKQ15262 1439 aa18.45■□□□□ 0.54
NCBP2-201ENST00000321256 CDK11AQ9UQ88 783 aaPredicted RBP18.42■□□□□ 0.54
NCBP2-201ENST00000321256 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
NCBP2-201ENST00000321256 MAPKBP1O60336 1514 aa18.38■□□□□ 0.53
NCBP2-201ENST00000321256 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
NCBP2-201ENST00000321256 TCOF1Q13428 1488 aaKnown RBP18.38■□□□□ 0.53
NCBP2-201ENST00000321256 MIA2Q96PC5 1412 aa18.37■□□□□ 0.53
NCBP2-201ENST00000321256 HFM1A2PYH4 1435 aa18.36■□□□□ 0.53
NCBP2-201ENST00000321256 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
NCBP2-201ENST00000321256 TROQ12816 1431 aaPredicted RBP18.35■□□□□ 0.53
NCBP2-201ENST00000321256 DIEXFQ68CQ4 756 aaKnown RBP18.35■□□□□ 0.53
NCBP2-201ENST00000321256 ABCA8O94911 1581 aa18.34■□□□□ 0.53
NCBP2-201ENST00000321256 PTPRGP23470 1445 aa18.33■□□□□ 0.52
NCBP2-201ENST00000321256 NAIPQ13075 1403 aa18.33■□□□□ 0.52
NCBP2-201ENST00000321256 RRP7BPQ9NSQ0 103 aa18.32■□□□□ 0.52
NCBP2-201ENST00000321256 OSCARQ8IYS5 282 aa18.31■□□□□ 0.52
NCBP2-201ENST00000321256 CLASP1Q7Z460 1538 aa18.31■□□□□ 0.52
NCBP2-201ENST00000321256 ZNF644Q9H582 1327 aaPredicted RBP18.29■□□□□ 0.52
NCBP2-201ENST00000321256 ATP10BO94823 1461 aa18.29■□□□□ 0.52
NCBP2-201ENST00000321256 KIF14Q15058 1648 aa18.28■□□□□ 0.52
NCBP2-201ENST00000321256 PLEKHD1A6NEE1 506 aa18.27■□□□□ 0.52
NCBP2-201ENST00000321256 SIN3AQ96ST3 1273 aa18.27■□□□□ 0.52
NCBP2-201ENST00000321256 SHROOM2Q13796 1616 aa18.27■□□□□ 0.52
NCBP2-201ENST00000321256 NEUROD1Q13562 356 aa18.27■□□□□ 0.51
NCBP2-201ENST00000321256 CFDP1Q9UEE9 299 aaPredicted RBP18.25■□□□□ 0.51
NCBP2-201ENST00000321256 UACAQ9BZF9 1416 aa18.24■□□□□ 0.51
NCBP2-201ENST00000321256 ERCC6L2Q5T890 1561 aa18.24■□□□□ 0.51
NCBP2-201ENST00000321256 DAPK1P53355 1430 aa18.24■□□□□ 0.51
NCBP2-201ENST00000321256 ADCY10Q96PN6 1610 aa18.24■□□□□ 0.51
NCBP2-201ENST00000321256 GPATCH8Q9UKJ3 1502 aaKnown RBP18.23■□□□□ 0.51
NCBP2-201ENST00000321256 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
NCBP2-201ENST00000321256 ABCC5O15440 1437 aa18.21■□□□□ 0.51
NCBP2-201ENST00000321256 AKNAQ7Z591 1439 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms