RNA–Protein interactions for RNA: ENST00000319562.10

FARP1-201, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FARP1, Length 10,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-201ENST00000319562 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
FARP1-201ENST00000319562 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
FARP1-201ENST00000319562 FTSJ3Q8IY81 847 aaKnown RBP15.79■□□□□ 0.12
FARP1-201ENST00000319562 L1TD1Q5T7N2 865 aaKnown RBP15.78■□□□□ 0.12
FARP1-201ENST00000319562 PLCB2Q00722 1185 aa15.78■□□□□ 0.12
FARP1-201ENST00000319562 MSNP26038 577 aaKnown RBP15.77■□□□□ 0.11
FARP1-201ENST00000319562 EIF4G2P78344 907 aaKnown RBP eCLIP15.76■□□□□ 0.11
FARP1-201ENST00000319562 NOP58Q9Y2X3 529 aaKnown RBP15.76■□□□□ 0.11
FARP1-201ENST00000319562 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
FARP1-201ENST00000319562 MIER1Q8N108 512 aa15.75■□□□□ 0.11
FARP1-201ENST00000319562 HSP90AB1P08238 724 aaKnown RBP15.74■□□□□ 0.11
FARP1-201ENST00000319562 CHMP4BQ9H444 224 aaKnown RBP15.74■□□□□ 0.11
FARP1-201ENST00000319562 KDM2AQ9Y2K7 1162 aa15.74■□□□□ 0.11
FARP1-201ENST00000319562 TPRNQ4KMQ1 711 aa15.73■□□□□ 0.11
FARP1-201ENST00000319562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.112e-7■■□□□ 12.2
FARP1-201ENST00000319562 TULP1O00294 542 aaPredicted RBP15.73■□□□□ 0.11
FARP1-201ENST00000319562 CFAP53Q96M91 514 aa15.72■□□□□ 0.11
FARP1-201ENST00000319562 A0A0G2JS52 829 aa15.72■□□□□ 0.11
FARP1-201ENST00000319562 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
FARP1-201ENST00000319562 LAS1LQ9Y4W2 734 aaKnown RBP15.69■□□□□ 0.1
FARP1-201ENST00000319562 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.12e-7■□□□□ 10.7
FARP1-201ENST00000319562 TSPY4P0CV99 314 aa15.69■□□□□ 0.1
FARP1-201ENST00000319562 TSPY10P0CW01 314 aa15.69■□□□□ 0.1
FARP1-201ENST00000319562 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
FARP1-201ENST00000319562 GOLGA6L4A6NEF3 574 aa15.68■□□□□ 0.1
FARP1-201ENST00000319562 FGD1P98174 961 aa15.67■□□□□ 0.1
FARP1-201ENST00000319562 CDCA8Q53HL2 280 aa15.67■□□□□ 0.1
FARP1-201ENST00000319562 MS4A1P11836 297 aa15.66■□□□□ 0.1
FARP1-201ENST00000319562 PPP4R2Q9NY27 417 aa15.65■□□□□ 0.1
FARP1-201ENST00000319562 CHIC2Q9UKJ5 165 aa15.65■□□□□ 0.1
FARP1-201ENST00000319562 DRC7Q8IY82 874 aa15.64■□□□□ 0.09
FARP1-201ENST00000319562 SUPT16HQ9Y5B9 1047 aaKnown RBP15.64■□□□□ 0.09
FARP1-201ENST00000319562 HSCBQ8IWL3 235 aa15.64■□□□□ 0.09
FARP1-201ENST00000319562 CFAP44Q96MT7 982 aa15.62■□□□□ 0.09
FARP1-201ENST00000319562 KNSTRNQ9Y448 316 aa15.62■□□□□ 0.09
FARP1-201ENST00000319562 PTMSP20962 102 aa15.62■□□□□ 0.09
FARP1-201ENST00000319562 AMER1Q5JTC6 1135 aaPredicted RBP15.62■□□□□ 0.09
FARP1-201ENST00000319562 KCNJ4P48050 445 aa15.61■□□□□ 0.09
FARP1-201ENST00000319562 C14orf37Q86TY3 774 aa15.61■□□□□ 0.09
FARP1-201ENST00000319562 KIAA2012Q0VF49 1180 aa15.6■□□□□ 0.09
FARP1-201ENST00000319562 ZBTB7CA1YPR0 619 aa15.6■□□□□ 0.09
FARP1-201ENST00000319562 TNNT3P45378 269 aaPredicted RBP15.59■□□□□ 0.09
FARP1-201ENST00000319562 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
FARP1-201ENST00000319562 MCCP23508 829 aa15.58■□□□□ 0.09
FARP1-201ENST00000319562 RGS3P49796 1198 aa15.57■□□□□ 0.08
FARP1-201ENST00000319562 MAPK8IP3Q9UPT6 1336 aa15.57■□□□□ 0.08
FARP1-201ENST00000319562 PNNQ9H307 717 aaKnown RBP15.57■□□□□ 0.08
FARP1-201ENST00000319562 OS9Q13438 667 aaPredicted RBP15.56■□□□□ 0.08
FARP1-201ENST00000319562 NAP1L2Q9ULW6 460 aaPredicted RBP15.56■□□□□ 0.08
FARP1-201ENST00000319562 DEKP35659 375 aaKnown RBP15.55■□□□□ 0.08
FARP1-201ENST00000319562 HIRIP3Q9BW71 556 aaPredicted RBP15.55■□□□□ 0.08
FARP1-201ENST00000319562 NOC3LQ8WTT2 800 aaKnown RBP15.54■□□□□ 0.08
FARP1-201ENST00000319562 NUDCQ9Y266 331 aa15.54■□□□□ 0.08
FARP1-201ENST00000319562 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
FARP1-201ENST00000319562 USP35Q9P2H5 1018 aa15.53■□□□□ 0.08
FARP1-201ENST00000319562 ABCC9O60706 1549 aa15.53■□□□□ 0.08
FARP1-201ENST00000319562 GOLGA2Q08379 1002 aa15.52■□□□□ 0.08
FARP1-201ENST00000319562 TAOK2Q9UL54 1235 aa15.52■□□□□ 0.07
FARP1-201ENST00000319562 GOLGA6L1Q8N7Z2 621 aa15.51■□□□□ 0.07
FARP1-201ENST00000319562 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
FARP1-201ENST00000319562 GBP4Q96PP9 640 aa15.49■□□□□ 0.07
FARP1-201ENST00000319562 FRAT1Q92837 279 aaPredicted RBP15.49■□□□□ 0.07
FARP1-201ENST00000319562 HAP1P54257 671 aaPredicted RBP15.49■□□□□ 0.07
FARP1-201ENST00000319562 CLSTN1O94985 981 aa15.48■□□□□ 0.07
FARP1-201ENST00000319562 NPHP1O15259 732 aa15.48■□□□□ 0.07
FARP1-201ENST00000319562 SYAP1Q96A49 352 aaPredicted RBP15.48■□□□□ 0.07
FARP1-201ENST00000319562 GNL2Q13823 731 aaKnown RBP15.47■□□□□ 0.07
FARP1-201ENST00000319562 RSF1Q96T23 1441 aaPredicted RBP15.45■□□□□ 0.06
FARP1-201ENST00000319562 HTATSF1O43719 755 aaKnown RBP15.45■□□□□ 0.06
FARP1-201ENST00000319562 PLEKHG5O94827 1062 aa15.44■□□□□ 0.06
FARP1-201ENST00000319562 ARID4BQ4LE39 1312 aaPredicted RBP15.44■□□□□ 0.06
FARP1-201ENST00000319562 TPM4P67936 248 aa15.44■□□□□ 0.06
FARP1-201ENST00000319562 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
FARP1-201ENST00000319562 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
FARP1-201ENST00000319562 B4GALNT3Q6L9W6 998 aa15.41■□□□□ 0.06
FARP1-201ENST00000319562 CARD11Q9BXL7 1154 aa15.41■□□□□ 0.06
FARP1-201ENST00000319562 RRP7BPQ9NSQ0 103 aa15.4■□□□□ 0.06
FARP1-201ENST00000319562 A0A0U1RQG5 324 aaPredicted RBP15.4■□□□□ 0.06
FARP1-201ENST00000319562 KIAA1211Q6ZU35 1233 aa15.4■□□□□ 0.06
FARP1-201ENST00000319562 SETQ01105 290 aaPredicted RBP15.39■□□□□ 0.05
FARP1-201ENST00000319562 CCDC34Q96HJ3 373 aa15.39■□□□□ 0.05
FARP1-201ENST00000319562 CLIP1P30622 1438 aa15.38■□□□□ 0.05
FARP1-201ENST00000319562 RGL3Q3MIN7 710 aa15.37■□□□□ 0.05
FARP1-201ENST00000319562 SPRYD3Q8NCJ5 442 aa15.37■□□□□ 0.05
FARP1-201ENST00000319562 CSPP1Q1MSJ5 1256 aa15.35■□□□□ 0.05
FARP1-201ENST00000319562 ARID3AQ99856 593 aa15.33■□□□□ 0.05
FARP1-201ENST00000319562 GOLGA6L3A6NEY3 463 aa15.33■□□□□ 0.04
FARP1-201ENST00000319562 PHF14O94880 888 aa15.33■□□□□ 0.04
FARP1-201ENST00000319562 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
FARP1-201ENST00000319562 RBM19Q9Y4C8 960 aaKnown RBP15.32■□□□□ 0.04
FARP1-201ENST00000319562 U2SURPO15042 1029 aaKnown RBP15.32■□□□□ 0.04
FARP1-201ENST00000319562 IPO8O15397 1037 aaKnown RBP15.31■□□□□ 0.04
FARP1-201ENST00000319562 POGKQ9P215 609 aa15.31■□□□□ 0.04
FARP1-201ENST00000319562 GZF1Q9H116 711 aaPredicted RBP15.3■□□□□ 0.04
FARP1-201ENST00000319562 SCRIBQ14160 1630 aa15.3■□□□□ 0.04
FARP1-201ENST00000319562 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.3■□□□□ 0.04
FARP1-201ENST00000319562 SENP3Q9H4L4 574 aaPredicted RBP15.29■□□□□ 0.04
FARP1-201ENST00000319562 HSP90AA2PQ14568 343 aaPredicted RBP15.29■□□□□ 0.04
FARP1-201ENST00000319562 ISY1Q9ULR0 285 aaKnown RBP15.29■□□□□ 0.04
FARP1-201ENST00000319562 PRM3Q9NNZ6 103 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms