RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 THOC2Q8NI27 1593 aaKnown RBP27.8■■■□□ 2.04
SHISA3-201ENST00000319234 GRIN2BQ13224 1484 aa27.78■■■□□ 2.04
SHISA3-201ENST00000319234 EFCAB5A4FU69 1503 aa27.77■■■□□ 2.04
SHISA3-201ENST00000319234 FHAD1B1AJZ9 1412 aa27.77■■■□□ 2.04
SHISA3-201ENST00000319234 ZNF608Q9ULD9 1512 aaPredicted RBP27.74■■■□□ 2.03
SHISA3-201ENST00000319234 ADAMTS12P58397 1594 aa27.71■■■□□ 2.03
SHISA3-201ENST00000319234 KANK4Q5T7N3 995 aaPredicted RBP27.68■■■□□ 2.02
SHISA3-201ENST00000319234 P3H3Q8IVL6 736 aa27.67■■■□□ 2.02
SHISA3-201ENST00000319234 MAP3K1Q13233 1512 aa27.66■■■□□ 2.02
SHISA3-201ENST00000319234 FHOD3Q2V2M9 1422 aa27.64■■■□□ 2.02
SHISA3-201ENST00000319234 EIF4G3O43432 1585 aaKnown RBP27.61■■■□□ 2.01
SHISA3-201ENST00000319234 CCER1Q8TC90 406 aaPredicted RBP27.6■■■□□ 2.01
SHISA3-201ENST00000319234 SAMD9Q5K651 1589 aa27.59■■■□□ 2.01
SHISA3-201ENST00000319234 TIAM1Q13009 1591 aa27.58■■■□□ 2.01
SHISA3-201ENST00000319234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.57■■■□□ 2
SHISA3-201ENST00000319234 PCF11O94913 1555 aaKnown RBP27.56■■■□□ 2
SHISA3-201ENST00000319234 SNAPC4Q5SXM2 1469 aa27.55■■■□□ 2
SHISA3-201ENST00000319234 FMN1Q68DA7 1419 aa27.55■■■□□ 2
SHISA3-201ENST00000319234 CASKIN1Q8WXD9 1431 aa27.54■■■□□ 2
SHISA3-201ENST00000319234 FYCO1Q9BQS8 1478 aa27.53■■■□□ 2
SHISA3-201ENST00000319234 IQGAP2Q13576 1575 aa27.49■■□□□ 1.99
SHISA3-201ENST00000319234 MAGI1Q96QZ7 1491 aaPredicted RBP27.48■■□□□ 1.99
SHISA3-201ENST00000319234 LRRC9Q6ZRR7 1453 aa27.48■■□□□ 1.99
SHISA3-201ENST00000319234 HNRNPUL2Q1KMD3 747 aaKnown RBP27.48■■□□□ 1.99
SHISA3-201ENST00000319234 CFAP43Q8NDM7 1665 aa27.47■■□□□ 1.99
SHISA3-201ENST00000319234 RRBP1Q9P2E9 1410 aaKnown RBP27.46■■□□□ 1.99
SHISA3-201ENST00000319234 GRIN2AQ12879 1464 aa27.44■■□□□ 1.98
SHISA3-201ENST00000319234 ATP1B4Q9UN42 357 aaPredicted RBP27.44■■□□□ 1.98
SHISA3-201ENST00000319234 KIAA0586Q9BVV6 1533 aa27.4■■□□□ 1.98
SHISA3-201ENST00000319234 SYNJ2O15056 1496 aa27.39■■□□□ 1.97
SHISA3-201ENST00000319234 UGGT2Q9NYU1 1516 aa27.39■■□□□ 1.97
SHISA3-201ENST00000319234 CHMP7Q8WUX9 453 aaPredicted RBP27.35■■□□□ 1.97
SHISA3-201ENST00000319234 CCNB3Q8WWL7 1395 aa27.35■■□□□ 1.97
SHISA3-201ENST00000319234 PHLDB1Q86UU1 1377 aa27.26■■□□□ 1.95
SHISA3-201ENST00000319234 CEP170Q5SW79 1584 aa27.24■■□□□ 1.95
SHISA3-201ENST00000319234 FBLN2P98095 1184 aa27.23■■□□□ 1.95
SHISA3-201ENST00000319234 DISP1Q96F81 1524 aa27.22■■□□□ 1.95
SHISA3-201ENST00000319234 NUP160Q12769 1436 aa27.22■■□□□ 1.95
SHISA3-201ENST00000319234 LRRIQ1Q96JM4 1722 aa27.22■■□□□ 1.95
SHISA3-201ENST00000319234 KIAA0556O60303 1618 aa27.21■■□□□ 1.95
SHISA3-201ENST00000319234 MTUS2Q5JR59 1369 aa27.19■■□□□ 1.94
SHISA3-201ENST00000319234 CCDC18Q5T9S5 1454 aa27.19■■□□□ 1.94
SHISA3-201ENST00000319234 HECW1Q76N89 1606 aa27.19■■□□□ 1.94
SHISA3-201ENST00000319234 EHBP1L1Q8N3D4 1523 aa27.11■■□□□ 1.93
SHISA3-201ENST00000319234 EPRSP07814 1512 aaKnown RBP27.1■■□□□ 1.93
SHISA3-201ENST00000319234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.09■■□□□ 1.93
SHISA3-201ENST00000319234 JPH4Q96JJ6 628 aa27.08■■□□□ 1.93
SHISA3-201ENST00000319234 ITGAEP38570 1179 aa27.07■■□□□ 1.92
SHISA3-201ENST00000319234 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
SHISA3-201ENST00000319234 DIEXFQ68CQ4 756 aaKnown RBP27.06■■□□□ 1.92
SHISA3-201ENST00000319234 CARMIL2Q6F5E8 1435 aa27.05■■□□□ 1.92
SHISA3-201ENST00000319234 NCOA2Q15596 1464 aa27.05■■□□□ 1.92
SHISA3-201ENST00000319234 SUPT6HQ7KZ85 1726 aaKnown RBP27.05■■□□□ 1.92
SHISA3-201ENST00000319234 MAGI3Q5TCQ9 1506 aa27.03■■□□□ 1.92
SHISA3-201ENST00000319234 FGD6Q6ZV73 1430 aa27.03■■□□□ 1.92
SHISA3-201ENST00000319234 CDK13Q14004 1512 aaKnown RBP27■■□□□ 1.91
SHISA3-201ENST00000319234 RAPGEF6Q8TEU7 1601 aa27■■□□□ 1.91
SHISA3-201ENST00000319234 ARHGEF11O15085 1522 aa26.99■■□□□ 1.91
SHISA3-201ENST00000319234 MYOM3Q5VTT5 1437 aa26.98■■□□□ 1.91
SHISA3-201ENST00000319234 DHX57Q6P158 1386 aaKnown RBP26.97■■□□□ 1.91
SHISA3-201ENST00000319234 NUP153P49790 1475 aaKnown RBP26.96■■□□□ 1.91
SHISA3-201ENST00000319234 CLSPNQ9HAW4 1339 aa26.95■■□□□ 1.9
SHISA3-201ENST00000319234 ZNF316A6NFI3 1004 aaPredicted RBP26.95■■□□□ 1.9
SHISA3-201ENST00000319234 CHD1O14646 1710 aa26.92■■□□□ 1.9
SHISA3-201ENST00000319234 SETD5Q9C0A6 1442 aa26.91■■□□□ 1.9
SHISA3-201ENST00000319234 ARID3CA6NKF2 412 aa26.91■■□□□ 1.9
SHISA3-201ENST00000319234 SCAF1Q9H7N4 1312 aaKnown RBP26.9■■□□□ 1.9
SHISA3-201ENST00000319234 RAB3GAP2Q9H2M9 1393 aa26.9■■□□□ 1.9
SHISA3-201ENST00000319234 PLB1Q6P1J6 1458 aa26.88■■□□□ 1.89
SHISA3-201ENST00000319234 CDK11AQ9UQ88 783 aaPredicted RBP26.86■■□□□ 1.89
SHISA3-201ENST00000319234 PRG4Q92954 1404 aaPredicted RBP26.84■■□□□ 1.89
SHISA3-201ENST00000319234 PTPN23Q9H3S7 1636 aa26.83■■□□□ 1.89
SHISA3-201ENST00000319234 ACIN1Q9UKV3 1341 aaKnown RBP26.81■■□□□ 1.88
SHISA3-201ENST00000319234 TCOF1Q13428 1488 aaKnown RBP26.81■■□□□ 1.88
SHISA3-201ENST00000319234 MIA2Q96PC5 1412 aa26.8■■□□□ 1.88
SHISA3-201ENST00000319234 ABCA8O94911 1581 aa26.8■■□□□ 1.88
SHISA3-201ENST00000319234 CENPBP07199 599 aaPredicted RBP26.77■■□□□ 1.88
SHISA3-201ENST00000319234 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
SHISA3-201ENST00000319234 TROQ12816 1431 aaPredicted RBP26.76■■□□□ 1.87
SHISA3-201ENST00000319234 PTPRKQ15262 1439 aa26.76■■□□□ 1.87
SHISA3-201ENST00000319234 PTPRGP23470 1445 aa26.74■■□□□ 1.87
SHISA3-201ENST00000319234 HFM1A2PYH4 1435 aa26.69■■□□□ 1.86
SHISA3-201ENST00000319234 ATP10BO94823 1461 aa26.67■■□□□ 1.86
SHISA3-201ENST00000319234 NEUROD1Q13562 356 aa26.66■■□□□ 1.86
SHISA3-201ENST00000319234 ADCY10Q96PN6 1610 aa26.65■■□□□ 1.86
SHISA3-201ENST00000319234 CLASP1Q7Z460 1538 aa26.64■■□□□ 1.85
SHISA3-201ENST00000319234 MAPKBP1O60336 1514 aa26.63■■□□□ 1.85
SHISA3-201ENST00000319234 PLEKHD1A6NEE1 506 aa26.62■■□□□ 1.85
SHISA3-201ENST00000319234 NAIPQ13075 1403 aa26.62■■□□□ 1.85
SHISA3-201ENST00000319234 UACAQ9BZF9 1416 aa26.59■■□□□ 1.85
SHISA3-201ENST00000319234 PELP1Q8IZL8 1130 aaKnown RBP26.58■■□□□ 1.85
SHISA3-201ENST00000319234 KIF14Q15058 1648 aa26.57■■□□□ 1.84
SHISA3-201ENST00000319234 AKNAQ7Z591 1439 aa26.57■■□□□ 1.84
SHISA3-201ENST00000319234 GPATCH8Q9UKJ3 1502 aaKnown RBP26.56■■□□□ 1.84
SHISA3-201ENST00000319234 ERCC6L2Q5T890 1561 aa26.56■■□□□ 1.84
SHISA3-201ENST00000319234 ITSN2Q9NZM3 1697 aa26.56■■□□□ 1.84
SHISA3-201ENST00000319234 CFDP1Q9UEE9 299 aaPredicted RBP26.53■■□□□ 1.84
SHISA3-201ENST00000319234 CHIC2Q9UKJ5 165 aa26.53■■□□□ 1.84
SHISA3-201ENST00000319234 DAPK1P53355 1430 aa26.52■■□□□ 1.84
SHISA3-201ENST00000319234 ZNF644Q9H582 1327 aaPredicted RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms