RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 NPM1P06748 294 aaKnown RBP eCLIP24.28■■□□□ 1.48
SYCN-201ENST00000318438 MAPKBP1O60336 1514 aa24.28■■□□□ 1.48
SYCN-201ENST00000318438 JPH4Q96JJ6 628 aa24.26■■□□□ 1.47
SYCN-201ENST00000318438 WRNQ14191 1432 aaPredicted RBP eCLIP24.25■■□□□ 1.47
SYCN-201ENST00000318438 ADCY10Q96PN6 1610 aa24.19■■□□□ 1.46
SYCN-201ENST00000318438 TSPOAP1O95153 1857 aa24.17■■□□□ 1.46
SYCN-201ENST00000318438 ERICH3Q5RHP9 1530 aa24.16■■□□□ 1.46
SYCN-201ENST00000318438 ADGRL1O94910 1474 aa24.11■■□□□ 1.45
SYCN-201ENST00000318438 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
SYCN-201ENST00000318438 HECW2Q9P2P5 1572 aa24.04■■□□□ 1.44
SYCN-201ENST00000318438 TOP2BQ02880 1626 aa24.04■■□□□ 1.44
SYCN-201ENST00000318438 BIVM-ERCC5R4GMW8 1640 aa24.03■■□□□ 1.44
SYCN-201ENST00000318438 PPRC1Q5VV67 1664 aaKnown RBP23.92■■□□□ 1.42
SYCN-201ENST00000318438 TTBK1Q5TCY1 1321 aaPredicted RBP23.89■■□□□ 1.42
SYCN-201ENST00000318438 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.41
SYCN-201ENST00000318438 COL17A1Q9UMD9 1497 aaPredicted RBP23.88■■□□□ 1.41
SYCN-201ENST00000318438 ASXL2Q76L83 1435 aa23.86■■□□□ 1.41
SYCN-201ENST00000318438 PTPRGP23470 1445 aa23.85■■□□□ 1.41
SYCN-201ENST00000318438 GLI2P10070 1586 aa23.84■■□□□ 1.41
SYCN-201ENST00000318438 ABCC2Q92887 1545 aa23.84■■□□□ 1.41
SYCN-201ENST00000318438 PLB1Q6P1J6 1458 aa23.81■■□□□ 1.4
SYCN-201ENST00000318438 FBXO41Q8TF61 875 aa23.81■■□□□ 1.4
SYCN-201ENST00000318438 TNIKQ9UKE5 1360 aa23.73■■□□□ 1.39
SYCN-201ENST00000318438 CUL7Q14999 1698 aa23.71■■□□□ 1.39
SYCN-201ENST00000318438 EPRSP07814 1512 aaKnown RBP23.7■■□□□ 1.38
SYCN-201ENST00000318438 IGF1RP08069 1367 aa23.7■■□□□ 1.38
SYCN-201ENST00000318438 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
SYCN-201ENST00000318438 MAP3K4Q9Y6R4 1608 aa23.69■■□□□ 1.38
SYCN-201ENST00000318438 TEX14Q8IWB6 1497 aa23.68■■□□□ 1.38
SYCN-201ENST00000318438 UHRF1BP1LA0JNW5 1464 aa23.67■■□□□ 1.38
SYCN-201ENST00000318438 CARMIL2Q6F5E8 1435 aa23.67■■□□□ 1.38
SYCN-201ENST00000318438 UACAQ9BZF9 1416 aa23.64■■□□□ 1.37
SYCN-201ENST00000318438 KDM5BQ9UGL1 1544 aa23.58■■□□□ 1.36
SYCN-201ENST00000318438 KIF27Q86VH2 1401 aa23.57■■□□□ 1.36
SYCN-201ENST00000318438 ZCCHC11Q5TAX3 1644 aaKnown RBP23.53■■□□□ 1.36
SYCN-201ENST00000318438 IQGAP2Q13576 1575 aa23.52■■□□□ 1.36
SYCN-201ENST00000318438 DISP1Q96F81 1524 aa23.52■■□□□ 1.36
SYCN-201ENST00000318438 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
SYCN-201ENST00000318438 KIF21BO75037 1637 aa23.48■■□□□ 1.35
SYCN-201ENST00000318438 WDR7Q9Y4E6 1490 aa23.47■■□□□ 1.35
SYCN-201ENST00000318438 LMTK3Q96Q04 1460 aa23.45■■□□□ 1.34
SYCN-201ENST00000318438 CD109Q6YHK3 1445 aa23.43■■□□□ 1.34
SYCN-201ENST00000318438 MAGI3Q5TCQ9 1506 aa23.42■■□□□ 1.34
SYCN-201ENST00000318438 PTPRMP28827 1452 aa23.39■■□□□ 1.34
SYCN-201ENST00000318438 KCNH8Q96L42 1107 aa23.38■■□□□ 1.33
SYCN-201ENST00000318438 UGGT2Q9NYU1 1516 aa23.34■■□□□ 1.33
SYCN-201ENST00000318438 CFAP43Q8NDM7 1665 aa23.34■■□□□ 1.33
SYCN-201ENST00000318438 KIAA0556O60303 1618 aa23.33■■□□□ 1.33
SYCN-201ENST00000318438 ADAMTSL3P82987 1691 aa23.3■■□□□ 1.32
SYCN-201ENST00000318438 PCF11O94913 1555 aaKnown RBP23.3■■□□□ 1.32
SYCN-201ENST00000318438 ARAP3Q8WWN8 1544 aa23.26■■□□□ 1.31
SYCN-201ENST00000318438 ILDR2Q71H61 639 aa23.25■■□□□ 1.31
SYCN-201ENST00000318438 SOCS7O14512 581 aa23.2■■□□□ 1.3
SYCN-201ENST00000318438 MADDQ8WXG6 1647 aa23.19■■□□□ 1.3
SYCN-201ENST00000318438 RAPGEF2Q9Y4G8 1499 aa23.18■■□□□ 1.3
SYCN-201ENST00000318438 DISP3Q9P2K9 1392 aa23.18■■□□□ 1.3
SYCN-201ENST00000318438 HSPA2P54652 639 aa23.18■■□□□ 1.3
SYCN-201ENST00000318438 ABCA8O94911 1581 aa23.18■■□□□ 1.3
SYCN-201ENST00000318438 ARID4BQ4LE39 1312 aaPredicted RBP23.17■■□□□ 1.3
SYCN-201ENST00000318438 RAPGEF3O95398 923 aa23.17■■□□□ 1.3
SYCN-201ENST00000318438 CERKQ8TCT0 537 aa23.17■■□□□ 1.3
SYCN-201ENST00000318438 BCORL1Q5H9F3 1711 aa23.16■■□□□ 1.3
SYCN-201ENST00000318438 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
SYCN-201ENST00000318438 PLPPR3Q6T4P5 718 aa23.08■■□□□ 1.29
SYCN-201ENST00000318438 PHLDB1Q86UU1 1377 aa23.08■■□□□ 1.29
SYCN-201ENST00000318438 RIMS1Q86UR5 1692 aaKnown RBP23.07■■□□□ 1.28
SYCN-201ENST00000318438 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
SYCN-201ENST00000318438 FRMPD1Q5SYB0 1578 aa23.05■■□□□ 1.28
SYCN-201ENST00000318438 ABCA9Q8IUA7 1624 aa23.03■■□□□ 1.28
SYCN-201ENST00000318438 ATP10BO94823 1461 aa23■■□□□ 1.27
SYCN-201ENST00000318438 NEO1Q92859 1461 aa23■■□□□ 1.27
SYCN-201ENST00000318438 CTTNBP2Q8WZ74 1663 aa22.99■■□□□ 1.27
SYCN-201ENST00000318438 ARHGEF40Q8TER5 1519 aa22.97■■□□□ 1.27
SYCN-201ENST00000318438 SPATA31D1Q6ZQQ2 1576 aa22.91■■□□□ 1.26
SYCN-201ENST00000318438 P3H3Q8IVL6 736 aa22.9■■□□□ 1.26
SYCN-201ENST00000318438 POGZQ7Z3K3 1410 aa22.87■■□□□ 1.25
SYCN-201ENST00000318438 FANCAO15360 1455 aa22.86■■□□□ 1.25
SYCN-201ENST00000318438 DENND4BO75064 1496 aaPredicted RBP22.86■■□□□ 1.25
SYCN-201ENST00000318438 MLECQ14165 292 aa22.85■■□□□ 1.25
SYCN-201ENST00000318438 SIGLEC1Q9BZZ2 1709 aa22.85■■□□□ 1.25
SYCN-201ENST00000318438 AKNAQ7Z591 1439 aa22.83■■□□□ 1.25
SYCN-201ENST00000318438 RICTORQ6R327 1708 aa22.83■■□□□ 1.25
SYCN-201ENST00000318438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.83■■□□□ 1.25
SYCN-201ENST00000318438 HNRNPUL2Q1KMD3 747 aaKnown RBP22.83■■□□□ 1.25
SYCN-201ENST00000318438 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.25
SYCN-201ENST00000318438 FHOD3Q2V2M9 1422 aa22.82■■□□□ 1.24
SYCN-201ENST00000318438 YEATS2Q9ULM3 1422 aa22.82■■□□□ 1.24
SYCN-201ENST00000318438 ZFYVE16Q7Z3T8 1539 aa22.78■■□□□ 1.24
SYCN-201ENST00000318438 TTC37Q6PGP7 1564 aa22.78■■□□□ 1.24
SYCN-201ENST00000318438 FER1L4A9Z1Z3 1794 aa22.76■■□□□ 1.23
SYCN-201ENST00000318438 ZMYM4Q5VZL5 1548 aa22.75■■□□□ 1.23
SYCN-201ENST00000318438 RAPGEF6Q8TEU7 1601 aa22.75■■□□□ 1.23
SYCN-201ENST00000318438 EFCAB5A4FU69 1503 aa22.74■■□□□ 1.23
SYCN-201ENST00000318438 DMRT2Q9Y5R5 561 aa22.74■■□□□ 1.23
SYCN-201ENST00000318438 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
SYCN-201ENST00000318438 CEBPAP49715 358 aaPredicted RBP22.73■■□□□ 1.23
SYCN-201ENST00000318438 PREX1Q8TCU6 1659 aa22.73■■□□□ 1.23
SYCN-201ENST00000318438 STRCQ7RTU9 1775 aa22.73■■□□□ 1.23
SYCN-201ENST00000318438 NUP153P49790 1475 aaKnown RBP22.7■■□□□ 1.22
SYCN-201ENST00000318438 CFAP74Q9C0B2 1584 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms