RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 AQRO60306 1485 aaKnown RBP eCLIP43.3■■■■■ 4.522e-6■■■□□ 15.6
TUBB6-201ENST00000317702 IFT140Q96RY7 1462 aa43.28■■■■■ 4.52
TUBB6-201ENST00000317702 KANK4Q5T7N3 995 aaPredicted RBP43.22■■■■■ 4.51
TUBB6-201ENST00000317702 THOC2Q8NI27 1593 aaKnown RBP43.22■■■■■ 4.51
TUBB6-201ENST00000317702 EFCAB5A4FU69 1503 aa43.2■■■■■ 4.51
TUBB6-201ENST00000317702 ZNF608Q9ULD9 1512 aaPredicted RBP43.18■■■■■ 4.5
TUBB6-201ENST00000317702 P3H3Q8IVL6 736 aa43.15■■■■■ 4.5
TUBB6-201ENST00000317702 GRIN2BQ13224 1484 aa43.14■■■■■ 4.5
TUBB6-201ENST00000317702 FHAD1B1AJZ9 1412 aa43.14■■■■■ 4.5
TUBB6-201ENST00000317702 ADAMTS12P58397 1594 aa43.13■■■■■ 4.5
TUBB6-201ENST00000317702 FHOD3Q2V2M9 1422 aa43.12■■■■■ 4.49
TUBB6-201ENST00000317702 PCF11O94913 1555 aaKnown RBP43.04■■■■■ 4.48
TUBB6-201ENST00000317702 MAP3K1Q13233 1512 aa43.04■■■■■ 4.48
TUBB6-201ENST00000317702 TIAM1Q13009 1591 aa43.03■■■■■ 4.48
TUBB6-201ENST00000317702 SAMD9Q5K651 1589 aa42.99■■■■■ 4.47
TUBB6-201ENST00000317702 EIF4G3O43432 1585 aaKnown RBP42.96■■■■■ 4.47
TUBB6-201ENST00000317702 HNRNPUL2Q1KMD3 747 aaKnown RBP42.94■■■■■ 4.46
TUBB6-201ENST00000317702 FYCO1Q9BQS8 1478 aa42.88■■■■■ 4.46
TUBB6-201ENST00000317702 CASKIN1Q8WXD9 1431 aa42.87■■■■■ 4.45
TUBB6-201ENST00000317702 CFAP43Q8NDM7 1665 aa42.87■■■■■ 4.45
TUBB6-201ENST00000317702 SNAPC4Q5SXM2 1469 aa42.85■■■■■ 4.45
TUBB6-201ENST00000317702 LRRC9Q6ZRR7 1453 aa42.84■■■■■ 4.45
TUBB6-201ENST00000317702 FMN1Q68DA7 1419 aa42.83■■■■■ 4.45
TUBB6-201ENST00000317702 RRBP1Q9P2E9 1410 aaKnown RBP42.83■■■■■ 4.45
TUBB6-201ENST00000317702 IQGAP2Q13576 1575 aa42.79■■■■■ 4.44
TUBB6-201ENST00000317702 ATP1B4Q9UN42 357 aaPredicted RBP42.75■■■■■ 4.43
TUBB6-201ENST00000317702 GRIN2AQ12879 1464 aa42.66■■■■■ 4.42
TUBB6-201ENST00000317702 MAGI1Q96QZ7 1491 aaPredicted RBP42.66■■■■■ 4.42
TUBB6-201ENST00000317702 CCNB3Q8WWL7 1395 aa42.65■■■■■ 4.42
TUBB6-201ENST00000317702 UGGT2Q9NYU1 1516 aa42.58■■■■■ 4.41
TUBB6-201ENST00000317702 KIAA0586Q9BVV6 1533 aa42.57■■■■■ 4.41
TUBB6-201ENST00000317702 PHLDB1Q86UU1 1377 aa42.56■■■■■ 4.4
TUBB6-201ENST00000317702 LRRIQ1Q96JM4 1722 aa42.54■■■■■ 4.4
TUBB6-201ENST00000317702 SYNJ2O15056 1496 aa42.53■■■■■ 4.4
TUBB6-201ENST00000317702 CHMP7Q8WUX9 453 aaPredicted RBP42.43■■■■■ 4.38
TUBB6-201ENST00000317702 CEP170Q5SW79 1584 aa42.41■■■■■ 4.38
TUBB6-201ENST00000317702 DISP1Q96F81 1524 aa42.39■■■■■ 4.38
TUBB6-201ENST00000317702 KIAA0556O60303 1618 aa42.37■■■■■ 4.37
TUBB6-201ENST00000317702 HECW1Q76N89 1606 aa42.33■■■■■ 4.37
TUBB6-201ENST00000317702 MTUS2Q5JR59 1369 aa42.33■■■■■ 4.37
TUBB6-201ENST00000317702 FBLN2P98095 1184 aa42.31■■■■■ 4.36
TUBB6-201ENST00000317702 NUP160Q12769 1436 aa42.29■■■■■ 4.36
TUBB6-201ENST00000317702 CCDC18Q5T9S5 1454 aa42.29■■■■■ 4.36
TUBB6-201ENST00000317702 ITGAEP38570 1179 aa42.28■■■■■ 4.36
TUBB6-201ENST00000317702 EHBP1L1Q8N3D4 1523 aa42.23■■■■■ 4.35
TUBB6-201ENST00000317702 MAGI3Q5TCQ9 1506 aa42.21■■■■■ 4.35
TUBB6-201ENST00000317702 DIEXFQ68CQ4 756 aaKnown RBP42.21■■■■■ 4.35
TUBB6-201ENST00000317702 EPRSP07814 1512 aaKnown RBP42.2■■■■■ 4.35
TUBB6-201ENST00000317702 FAM50AQ14320 339 aaKnown RBP42.19■■■■■ 4.35
TUBB6-201ENST00000317702 CLSPNQ9HAW4 1339 aa42.18■■■■■ 4.34
TUBB6-201ENST00000317702 NCOA2Q15596 1464 aa42.16■■■■■ 4.34
TUBB6-201ENST00000317702 DHX57Q6P158 1386 aaKnown RBP42.16■■■■■ 4.34
TUBB6-201ENST00000317702 ZNF316A6NFI3 1004 aaPredicted RBP42.15■■■■■ 4.34
TUBB6-201ENST00000317702 SUPT6HQ7KZ85 1726 aaKnown RBP42.14■■■■■ 4.34
TUBB6-201ENST00000317702 FGD6Q6ZV73 1430 aa42.14■■■■■ 4.34
TUBB6-201ENST00000317702 CDK13Q14004 1512 aaKnown RBP42.13■■■■■ 4.33
TUBB6-201ENST00000317702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP42.12■■■■■ 4.33
TUBB6-201ENST00000317702 ARHGEF11O15085 1522 aa42.07■■■■■ 4.33
TUBB6-201ENST00000317702 JPH4Q96JJ6 628 aa42.04■■■■■ 4.32
TUBB6-201ENST00000317702 RAPGEF6Q8TEU7 1601 aa42.04■■■■■ 4.32
TUBB6-201ENST00000317702 MYOM3Q5VTT5 1437 aa42.03■■■■■ 4.32
TUBB6-201ENST00000317702 NUP153P49790 1475 aaKnown RBP42.01■■■■■ 4.32
TUBB6-201ENST00000317702 RAB3GAP2Q9H2M9 1393 aa42■■■■■ 4.31
TUBB6-201ENST00000317702 ARID3CA6NKF2 412 aa41.99■■■■■ 4.31
TUBB6-201ENST00000317702 CARMIL2Q6F5E8 1435 aa41.98■■■■■ 4.31
TUBB6-201ENST00000317702 SETD5Q9C0A6 1442 aa41.96■■■■■ 4.31
TUBB6-201ENST00000317702 CHD1O14646 1710 aa41.89■■■■■ 4.3
TUBB6-201ENST00000317702 PLB1Q6P1J6 1458 aa41.87■■■■■ 4.29
TUBB6-201ENST00000317702 PTPN23Q9H3S7 1636 aa41.84■■■■■ 4.29
TUBB6-201ENST00000317702 PTPRKQ15262 1439 aa41.79■■■■■ 4.28
TUBB6-201ENST00000317702 TCOF1Q13428 1488 aaKnown RBP41.76■■■■■ 4.28
TUBB6-201ENST00000317702 PRG4Q92954 1404 aaPredicted RBP41.72■■■■■ 4.27
TUBB6-201ENST00000317702 ABCA8O94911 1581 aa41.7■■■■■ 4.27
TUBB6-201ENST00000317702 MIA2Q96PC5 1412 aa41.68■■■■■ 4.26
TUBB6-201ENST00000317702 CDK11AQ9UQ88 783 aaPredicted RBP41.67■■■■■ 4.26
TUBB6-201ENST00000317702 MAPKBP1O60336 1514 aa41.66■■■■■ 4.26
TUBB6-201ENST00000317702 TROQ12816 1431 aaPredicted RBP41.62■■■■■ 4.25
TUBB6-201ENST00000317702 HFM1A2PYH4 1435 aa41.61■■■■■ 4.25
TUBB6-201ENST00000317702 SHROOM2Q13796 1616 aa41.6■■■■■ 4.25
TUBB6-201ENST00000317702 PTPRGP23470 1445 aa41.52■■■■■ 4.24
TUBB6-201ENST00000317702 NAIPQ13075 1403 aa41.52■■■■■ 4.24
TUBB6-201ENST00000317702 ADCY10Q96PN6 1610 aa41.5■■■■■ 4.23
TUBB6-201ENST00000317702 ATP10BO94823 1461 aa41.49■■■■■ 4.23
TUBB6-201ENST00000317702 KIF14Q15058 1648 aa41.47■■■■■ 4.23
TUBB6-201ENST00000317702 SCAF1Q9H7N4 1312 aaKnown RBP41.44■■■■■ 4.22
TUBB6-201ENST00000317702 ACIN1Q9UKV3 1341 aaKnown RBP41.42■■■■■ 4.22
TUBB6-201ENST00000317702 ERCC6L2Q5T890 1561 aa41.4■■■■■ 4.22
TUBB6-201ENST00000317702 CLASP1Q7Z460 1538 aa41.39■■■■■ 4.22
TUBB6-201ENST00000317702 CENPBP07199 599 aaPredicted RBP41.38■■■■■ 4.21
TUBB6-201ENST00000317702 CHIC2Q9UKJ5 165 aa41.38■■■■■ 4.21
TUBB6-201ENST00000317702 AKNAQ7Z591 1439 aa41.36■■■■■ 4.21
TUBB6-201ENST00000317702 GCC2Q8IWJ2 1684 aa41.35■■■■■ 4.21
TUBB6-201ENST00000317702 GPATCH8Q9UKJ3 1502 aaKnown RBP41.35■■■■■ 4.21
TUBB6-201ENST00000317702 ZNF644Q9H582 1327 aaPredicted RBP41.35■■■■■ 4.21
TUBB6-201ENST00000317702 ITSN2Q9NZM3 1697 aa41.35■■■■■ 4.21
TUBB6-201ENST00000317702 MIER1Q8N108 512 aa41.34■■■■■ 4.21
TUBB6-201ENST00000317702 NEUROD1Q13562 356 aa41.33■■■■■ 4.21
TUBB6-201ENST00000317702 RRP7BPQ9NSQ0 103 aa41.33■■■■■ 4.21
TUBB6-201ENST00000317702 PLEKHD1A6NEE1 506 aa41.33■■■■■ 4.21
TUBB6-201ENST00000317702 DAPK1P53355 1430 aa41.33■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms