RNA–Protein interactions for RNA: ENST00000317623.8

PCNX4-201, Transcript of pecanex 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCNX4, Length 17,339 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-201ENST00000317623 SLC24A1O60721 1099 aa8.68□□□□□ -1.02
PCNX4-201ENST00000317623 ARID4BQ4LE39 1312 aaPredicted RBP8.67□□□□□ -1.02
PCNX4-201ENST00000317623 CHAF1AQ13111 956 aaPredicted RBP8.67□□□□□ -1.02
PCNX4-201ENST00000317623 TNNT3P45378 269 aaPredicted RBP8.66□□□□□ -1.02
PCNX4-201ENST00000317623 VSIG10Q8N0Z9 540 aa8.66□□□□□ -1.02
PCNX4-201ENST00000317623 TSHZ2Q9NRE2 1034 aa8.65□□□□□ -1.02
PCNX4-201ENST00000317623 MSNP26038 577 aaKnown RBP8.65□□□□□ -1.03
PCNX4-201ENST00000317623 TONSLQ96HA7 1378 aa8.64□□□□□ -1.03
PCNX4-201ENST00000317623 B4GALNT3Q6L9W6 998 aa8.62□□□□□ -1.03
PCNX4-201ENST00000317623 MYH16Q9H6N6 1097 aa8.62□□□□□ -1.03
PCNX4-201ENST00000317623 PRKCSHP14314 528 aaPredicted RBP8.59□□□□□ -1.03
PCNX4-201ENST00000317623 GOLGA6L6A8MZA4 724 aa8.59□□□□□ -1.03
PCNX4-201ENST00000317623 WDR43Q15061 677 aaKnown RBP eCLIP8.59□□□□□ -1.04
PCNX4-201ENST00000317623 PTMSP20962 102 aa8.58□□□□□ -1.04
PCNX4-201ENST00000317623 ZRSR1Q15695 479 aaKnown RBP8.58□□□□□ -1.04
PCNX4-201ENST00000317623 ARID3AQ99856 593 aa8.58□□□□□ -1.04
PCNX4-201ENST00000317623 HSP90AB1P08238 724 aaKnown RBP8.57□□□□□ -1.04
PCNX4-201ENST00000317623 CASC1Q6TDU7 716 aa8.57□□□□□ -1.04
PCNX4-201ENST00000317623 NRDCO43847 1150 aa8.56□□□□□ -1.04
PCNX4-201ENST00000317623 PKNOX2Q96KN3 472 aa8.55□□□□□ -1.04
PCNX4-201ENST00000317623 KIAA2012Q0VF49 1180 aa8.55□□□□□ -1.04
PCNX4-201ENST00000317623 IPO9Q96P70 1041 aaKnown RBP8.55□□□□□ -1.04
PCNX4-201ENST00000317623 PLCB2Q00722 1185 aa8.54□□□□□ -1.04
PCNX4-201ENST00000317623 TPRNQ4KMQ1 711 aa8.54□□□□□ -1.04
PCNX4-201ENST00000317623 USP35Q9P2H5 1018 aa8.54□□□□□ -1.04
PCNX4-201ENST00000317623 GOLGA6L3A6NEY3 463 aa8.54□□□□□ -1.04
PCNX4-201ENST00000317623 PODXL2Q9NZ53 605 aa8.53□□□□□ -1.04
PCNX4-201ENST00000317623 HSCBQ8IWL3 235 aa8.53□□□□□ -1.04
PCNX4-201ENST00000317623 HIRIP3Q9BW71 556 aaPredicted RBP8.53□□□□□ -1.04
PCNX4-201ENST00000317623 DRC7Q8IY82 874 aa8.52□□□□□ -1.05
PCNX4-201ENST00000317623 A0A0U1RQG5 324 aaPredicted RBP8.52□□□□□ -1.05
PCNX4-201ENST00000317623 RGS3P49796 1198 aa8.52□□□□□ -1.05
PCNX4-201ENST00000317623 CCDC180Q9P1Z9 1646 aa8.52□□□□□ -1.05
PCNX4-201ENST00000317623 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
PCNX4-201ENST00000317623 GZF1Q9H116 711 aaPredicted RBP8.51□□□□□ -1.05
PCNX4-201ENST00000317623 GBP4Q96PP9 640 aa8.51□□□□□ -1.05
PCNX4-201ENST00000317623 EIF4G2P78344 907 aaKnown RBP eCLIP8.49□□□□□ -1.05
PCNX4-201ENST00000317623 TCERG1O14776 1098 aaKnown RBP8.49□□□□□ -1.05
PCNX4-201ENST00000317623 SPRYD3Q8NCJ5 442 aa8.48□□□□□ -1.05
PCNX4-201ENST00000317623 FTSJ3Q8IY81 847 aaKnown RBP8.47□□□□□ -1.05
PCNX4-201ENST00000317623 ANO8Q9HCE9 1232 aaPredicted RBP8.47□□□□□ -1.05
PCNX4-201ENST00000317623 FANCIQ9NVI1 1328 aa8.46□□□□□ -1.06
PCNX4-201ENST00000317623 CCER2I3L3R5 266 aa8.45□□□□□ -1.06
PCNX4-201ENST00000317623 ZBTB7CA1YPR0 619 aa8.45□□□□□ -1.06
PCNX4-201ENST00000317623 GOLGA6L1Q8N7Z2 621 aa8.44□□□□□ -1.06
PCNX4-201ENST00000317623 GSE1Q14687 1217 aa8.44□□□□□ -1.06
PCNX4-201ENST00000317623 ZNF771Q7L3S4 317 aaPredicted RBP8.44□□□□□ -1.06
PCNX4-201ENST00000317623 GOLGA6L4A6NEF3 574 aa8.44□□□□□ -1.06
PCNX4-201ENST00000317623 SETQ01105 290 aaPredicted RBP8.43□□□□□ -1.06
PCNX4-201ENST00000317623 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
PCNX4-201ENST00000317623 APPP05067 770 aa8.42□□□□□ -1.06
PCNX4-201ENST00000317623 CALRP27797 417 aaKnown RBP8.42□□□□□ -1.06
PCNX4-201ENST00000317623 P3H3Q8IVL6 736 aa8.41□□□□□ -1.06
PCNX4-201ENST00000317623 KDM2AQ9Y2K7 1162 aa8.41□□□□□ -1.06
PCNX4-201ENST00000317623 SYAP1Q96A49 352 aaPredicted RBP8.41□□□□□ -1.06
PCNX4-201ENST00000317623 FAM13BQ9NYF5 915 aa8.41□□□□□ -1.06
PCNX4-201ENST00000317623 SLKQ9H2G2 1235 aaPredicted RBP8.4□□□□□ -1.06
PCNX4-201ENST00000317623 MS4A1P11836 297 aa8.39□□□□□ -1.07
PCNX4-201ENST00000317623 CHMP4BQ9H444 224 aaKnown RBP8.38□□□□□ -1.07
PCNX4-201ENST00000317623 MAP7D2Q96T17 732 aa8.38□□□□□ -1.07
PCNX4-201ENST00000317623 PHF14O94880 888 aa8.38□□□□□ -1.07
PCNX4-201ENST00000317623 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
PCNX4-201ENST00000317623 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.37□□□□□ -1.07
PCNX4-201ENST00000317623 CALD1Q05682 793 aaKnown RBP8.36□□□□□ -1.07
PCNX4-201ENST00000317623 ZNF777Q9ULD5 760 aaPredicted RBP8.36□□□□□ -1.07
PCNX4-201ENST00000317623 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
PCNX4-201ENST00000317623 FAM43AQ8N2R8 423 aa8.36□□□□□ -1.07
PCNX4-201ENST00000317623 NOC3LQ8WTT2 800 aaKnown RBP8.36□□□□□ -1.07
PCNX4-201ENST00000317623 RCAN3Q9UKA8 241 aa8.36□□□□□ -1.07
PCNX4-201ENST00000317623 MTERF4Q7Z6M4 381 aaKnown RBP8.35□□□□□ -1.07
PCNX4-201ENST00000317623 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
PCNX4-201ENST00000317623 MCCP23508 829 aa8.35□□□□□ -1.07
PCNX4-201ENST00000317623 FRAT1Q92837 279 aaPredicted RBP8.35□□□□□ -1.07
PCNX4-201ENST00000317623 FGD1P98174 961 aa8.34□□□□□ -1.07
PCNX4-201ENST00000317623 TEX35Q5T0J7 233 aa8.34□□□□□ -1.07
PCNX4-201ENST00000317623 KNSTRNQ9Y448 316 aa8.34□□□□□ -1.07
PCNX4-201ENST00000317623 TPM2P07951 284 aa8.34□□□□□ -1.07
PCNX4-201ENST00000317623 SKOR2Q2VWA4 1001 aaPredicted RBP8.34□□□□□ -1.07
PCNX4-201ENST00000317623 ARID3CA6NKF2 412 aa8.34□□□□□ -1.07
PCNX4-201ENST00000317623 HTATSF1O43719 755 aaKnown RBP8.33□□□□□ -1.08
PCNX4-201ENST00000317623 MYO15BQ96JP2 1530 aa8.33□□□□□ -1.08
PCNX4-201ENST00000317623 KCNJ4P48050 445 aa8.33□□□□□ -1.08
PCNX4-201ENST00000317623 CHIC2Q9UKJ5 165 aa8.32□□□□□ -1.08
PCNX4-201ENST00000317623 NOM1Q5C9Z4 860 aaKnown RBP8.32□□□□□ -1.08
PCNX4-201ENST00000317623 RRP9O43818 475 aaKnown RBP8.32□□□□□ -1.08
PCNX4-201ENST00000317623 CFAP53Q96M91 514 aa8.32□□□□□ -1.08
PCNX4-201ENST00000317623 GPS2Q13227 327 aa8.31□□□□□ -1.08
PCNX4-201ENST00000317623 RWDD1Q9H446 243 aaPredicted RBP8.31□□□□□ -1.08
PCNX4-201ENST00000317623 TPM4P67936 248 aa8.3□□□□□ -1.08
PCNX4-201ENST00000317623 BRPF3Q9ULD4 1205 aa8.3□□□□□ -1.08
PCNX4-201ENST00000317623 IL27Q8NEV9 243 aa8.29□□□□□ -1.08
PCNX4-201ENST00000317623 NAP1L2Q9ULW6 460 aaPredicted RBP8.29□□□□□ -1.08
PCNX4-201ENST00000317623 TULP1O00294 542 aaPredicted RBP8.29□□□□□ -1.08
PCNX4-201ENST00000317623 CDCA8Q53HL2 280 aa8.29□□□□□ -1.08
PCNX4-201ENST00000317623 PDE4AP27815 886 aa8.28□□□□□ -1.08
PCNX4-201ENST00000317623 CHGAP10645 457 aaKnown RBP8.28□□□□□ -1.08
PCNX4-201ENST00000317623 UBE2Q2Q8WVN8 375 aa8.27□□□□□ -1.09
PCNX4-201ENST00000317623 KIAA1211Q6ZU35 1233 aa8.27□□□□□ -1.09
PCNX4-201ENST00000317623 TAF3Q5VWG9 929 aa8.27□□□□□ -1.09
PCNX4-201ENST00000317623 SLC4A3P48751 1232 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms