RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 VPS8Q8N3P4 1428 aa24.71■■□□□ 1.55
CALR-201ENST00000316448 CTTNBP2Q8WZ74 1663 aa24.67■■□□□ 1.54
CALR-201ENST00000316448 TRIM26Q12899 539 aaPredicted RBP24.67■■□□□ 1.54
CALR-201ENST00000316448 MAGI1Q96QZ7 1491 aaPredicted RBP24.63■■□□□ 1.53
CALR-201ENST00000316448 P3H3Q8IVL6 736 aa24.62■■□□□ 1.53
CALR-201ENST00000316448 GRIN2AQ12879 1464 aa24.58■■□□□ 1.53
CALR-201ENST00000316448 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
CALR-201ENST00000316448 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
CALR-201ENST00000316448 FBLN2P98095 1184 aa24.54■■□□□ 1.52
CALR-201ENST00000316448 TTBK1Q5TCY1 1321 aaPredicted RBP24.54■■□□□ 1.52
CALR-201ENST00000316448 FHOD3Q2V2M9 1422 aa24.52■■□□□ 1.52
CALR-201ENST00000316448 EFCAB5A4FU69 1503 aa24.5■■□□□ 1.51
CALR-201ENST00000316448 IQGAP2Q13576 1575 aa24.48■■□□□ 1.51
CALR-201ENST00000316448 SAMD9Q5K651 1589 aa24.47■■□□□ 1.51
CALR-201ENST00000316448 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
CALR-201ENST00000316448 KIAA0586Q9BVV6 1533 aa24.46■■□□□ 1.51
CALR-201ENST00000316448 NUP160Q12769 1436 aa24.42■■□□□ 1.5
CALR-201ENST00000316448 APLP2Q06481 763 aa24.41■■□□□ 1.5
CALR-201ENST00000316448 UGGT2Q9NYU1 1516 aa24.39■■□□□ 1.49
CALR-201ENST00000316448 KANK4Q5T7N3 995 aaPredicted RBP24.39■■□□□ 1.49
CALR-201ENST00000316448 PCF11O94913 1555 aaKnown RBP24.34■■□□□ 1.49
CALR-201ENST00000316448 HRCP23327 699 aa24.33■■□□□ 1.49
CALR-201ENST00000316448 DISP1Q96F81 1524 aa24.32■■□□□ 1.48
CALR-201ENST00000316448 CHD1O14646 1710 aa24.31■■□□□ 1.48
CALR-201ENST00000316448 FMN1Q68DA7 1419 aa24.3■■□□□ 1.48
CALR-201ENST00000316448 CASKIN1Q8WXD9 1431 aa24.3■■□□□ 1.48
CALR-201ENST00000316448 JPH4Q96JJ6 628 aa24.29■■□□□ 1.48
CALR-201ENST00000316448 ATP1B4Q9UN42 357 aaPredicted RBP24.29■■□□□ 1.48
CALR-201ENST00000316448 FYCO1Q9BQS8 1478 aa24.25■■□□□ 1.47
CALR-201ENST00000316448 KIAA0556O60303 1618 aa24.25■■□□□ 1.47
CALR-201ENST00000316448 TIAM1Q13009 1591 aa24.24■■□□□ 1.47
CALR-201ENST00000316448 MAP3K1Q13233 1512 aa24.23■■□□□ 1.47
CALR-201ENST00000316448 LRRC9Q6ZRR7 1453 aa24.16■■□□□ 1.46
CALR-201ENST00000316448 LRRIQ1Q96JM4 1722 aa24.15■■□□□ 1.46
CALR-201ENST00000316448 CFAP43Q8NDM7 1665 aa24.15■■□□□ 1.46
CALR-201ENST00000316448 CARMIL2Q6F5E8 1435 aa24.11■■□□□ 1.45
CALR-201ENST00000316448 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
CALR-201ENST00000316448 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
CALR-201ENST00000316448 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
CALR-201ENST00000316448 ARID3CA6NKF2 412 aa24.05■■□□□ 1.44
CALR-201ENST00000316448 HECW1Q76N89 1606 aa24.03■■□□□ 1.44
CALR-201ENST00000316448 EPRSP07814 1512 aaKnown RBP24.03■■□□□ 1.44
CALR-201ENST00000316448 PLB1Q6P1J6 1458 aa24.02■■□□□ 1.44
CALR-201ENST00000316448 ERCC6L2Q5T890 1561 aa24.01■■□□□ 1.43
CALR-201ENST00000316448 NUP153P49790 1475 aaKnown RBP24.01■■□□□ 1.43
CALR-201ENST00000316448 CDK13Q14004 1512 aaKnown RBP24.01■■□□□ 1.43
CALR-201ENST00000316448 PHLDB1Q86UU1 1377 aa24■■□□□ 1.43
CALR-201ENST00000316448 MAGI3Q5TCQ9 1506 aa24■■□□□ 1.43
CALR-201ENST00000316448 RAPGEF6Q8TEU7 1601 aa24■■□□□ 1.43
CALR-201ENST00000316448 CCDC18Q5T9S5 1454 aa23.98■■□□□ 1.43
CALR-201ENST00000316448 RRBP1Q9P2E9 1410 aaKnown RBP23.98■■□□□ 1.43
CALR-201ENST00000316448 MTUS2Q5JR59 1369 aa23.96■■□□□ 1.43
CALR-201ENST00000316448 HNRNPUL2Q1KMD3 747 aaKnown RBP23.95■■□□□ 1.42
CALR-201ENST00000316448 PTPRGP23470 1445 aa23.94■■□□□ 1.42
CALR-201ENST00000316448 ABCA8O94911 1581 aa23.93■■□□□ 1.42
CALR-201ENST00000316448 CCNB3Q8WWL7 1395 aa23.9■■□□□ 1.42
CALR-201ENST00000316448 EHBP1L1Q8N3D4 1523 aa23.88■■□□□ 1.41
CALR-201ENST00000316448 NCOA2Q15596 1464 aa23.87■■□□□ 1.41
CALR-201ENST00000316448 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
CALR-201ENST00000316448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.84■■□□□ 1.41
CALR-201ENST00000316448 ARHGEF11O15085 1522 aa23.83■■□□□ 1.41
CALR-201ENST00000316448 ATP10BO94823 1461 aa23.82■■□□□ 1.4
CALR-201ENST00000316448 ZEB1P37275 1124 aaPredicted RBP23.82■■□□□ 1.4
CALR-201ENST00000316448 SUPT6HQ7KZ85 1726 aaKnown RBP23.81■■□□□ 1.4
CALR-201ENST00000316448 UACAQ9BZF9 1416 aa23.79■■□□□ 1.4
CALR-201ENST00000316448 FAM50AQ14320 339 aaKnown RBP23.76■■□□□ 1.39
CALR-201ENST00000316448 FGD6Q6ZV73 1430 aa23.76■■□□□ 1.39
CALR-201ENST00000316448 ITGAEP38570 1179 aa23.76■■□□□ 1.39
CALR-201ENST00000316448 CDK11AQ9UQ88 783 aaPredicted RBP23.75■■□□□ 1.39
CALR-201ENST00000316448 MYOM3Q5VTT5 1437 aa23.75■■□□□ 1.39
CALR-201ENST00000316448 TROQ12816 1431 aaPredicted RBP23.73■■□□□ 1.39
CALR-201ENST00000316448 ABCC2Q92887 1545 aa23.69■■□□□ 1.38
CALR-201ENST00000316448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.68■■□□□ 1.382e-38■□□□□ 8.4
CALR-201ENST00000316448 PLEKHD1A6NEE1 506 aa23.68■■□□□ 1.38
CALR-201ENST00000316448 KIF14Q15058 1648 aa23.66■■□□□ 1.38
CALR-201ENST00000316448 UHRF1BP1LA0JNW5 1464 aa23.63■■□□□ 1.37
CALR-201ENST00000316448 PTPN23Q9H3S7 1636 aa23.62■■□□□ 1.37
CALR-201ENST00000316448 CCER1Q8TC90 406 aaPredicted RBP23.62■■□□□ 1.37
CALR-201ENST00000316448 ADCY10Q96PN6 1610 aa23.61■■□□□ 1.37
CALR-201ENST00000316448 PTPRKQ15262 1439 aa23.6■■□□□ 1.37
CALR-201ENST00000316448 TCOF1Q13428 1488 aaKnown RBP23.6■■□□□ 1.37
CALR-201ENST00000316448 MIA2Q96PC5 1412 aa23.59■■□□□ 1.37
CALR-201ENST00000316448 ABCC10Q5T3U5 1492 aa23.57■■□□□ 1.36
CALR-201ENST00000316448 ZNF644Q9H582 1327 aaPredicted RBP23.57■■□□□ 1.36
CALR-201ENST00000316448 GPATCH8Q9UKJ3 1502 aaKnown RBP23.57■■□□□ 1.36
CALR-201ENST00000316448 KDM5BQ9UGL1 1544 aa23.56■■□□□ 1.36
CALR-201ENST00000316448 ZCCHC11Q5TAX3 1644 aaKnown RBP23.54■■□□□ 1.36
CALR-201ENST00000316448 CFDP1Q9UEE9 299 aaPredicted RBP23.49■■□□□ 1.35
CALR-201ENST00000316448 RAB3GAP2Q9H2M9 1393 aa23.49■■□□□ 1.35
CALR-201ENST00000316448 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
CALR-201ENST00000316448 KCNH8Q96L42 1107 aa23.46■■□□□ 1.35
CALR-201ENST00000316448 CDC42BPAQ5VT25 1732 aa23.45■■□□□ 1.35
CALR-201ENST00000316448 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
CALR-201ENST00000316448 ITSN2Q9NZM3 1697 aa23.43■■□□□ 1.34
CALR-201ENST00000316448 CHIC2Q9UKJ5 165 aa23.43■■□□□ 1.34
CALR-201ENST00000316448 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
CALR-201ENST00000316448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.42■■□□□ 1.346e-38■■□□□ 12
CALR-201ENST00000316448 CAMSAP2Q08AD1 1489 aa23.42■■□□□ 1.34
CALR-201ENST00000316448 ABCC5O15440 1437 aa23.41■■□□□ 1.34
CALR-201ENST00000316448 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms