RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 HSP90AA1P07900 732 aaKnown RBP16.53■□□□□ 0.24
EBF1-201ENST00000313708 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
EBF1-201ENST00000313708 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
EBF1-201ENST00000313708 HSP90AA2PQ14568 343 aaPredicted RBP16.47■□□□□ 0.23
EBF1-201ENST00000313708 TONSLQ96HA7 1378 aa16.47■□□□□ 0.23
EBF1-201ENST00000313708 BRPF3Q9ULD4 1205 aa16.46■□□□□ 0.23
EBF1-201ENST00000313708 USP35Q9P2H5 1018 aa16.45■□□□□ 0.22
EBF1-201ENST00000313708 SENP3-EIF4A1A0A087X0R7 540 aa16.45■□□□□ 0.22
EBF1-201ENST00000313708 GSE1Q14687 1217 aa16.44■□□□□ 0.22
EBF1-201ENST00000313708 A0A0U1RQG5 324 aaPredicted RBP16.42■□□□□ 0.22
EBF1-201ENST00000313708 TNIKQ9UKE5 1360 aa16.39■□□□□ 0.22
EBF1-201ENST00000313708 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.21
EBF1-201ENST00000313708 TRIM44Q96DX7 344 aaPredicted RBP16.38■□□□□ 0.21
EBF1-201ENST00000313708 ANP32BQ92688 251 aaKnown RBP16.37■□□□□ 0.21
EBF1-201ENST00000313708 SIN3AQ96ST3 1273 aa16.37■□□□□ 0.21
EBF1-201ENST00000313708 CLIP1P30622 1438 aa16.36■□□□□ 0.21
EBF1-201ENST00000313708 SLC24A1O60721 1099 aa16.32■□□□□ 0.2
EBF1-201ENST00000313708 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
EBF1-201ENST00000313708 L1TD1Q5T7N2 865 aaKnown RBP16.31■□□□□ 0.2
EBF1-201ENST00000313708 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.2
EBF1-201ENST00000313708 ZNF326Q5BKZ1 582 aaKnown RBP16.27■□□□□ 0.2
EBF1-201ENST00000313708 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.2
EBF1-201ENST00000313708 TNNT2P45379 298 aaPredicted RBP16.27■□□□□ 0.19
EBF1-201ENST00000313708 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
EBF1-201ENST00000313708 TMC1Q8TDI8 760 aa16.25■□□□□ 0.19
EBF1-201ENST00000313708 UPF2Q9HAU5 1272 aaKnown RBP16.24■□□□□ 0.19
EBF1-201ENST00000313708 NACADO15069 1562 aa16.24■□□□□ 0.19
EBF1-201ENST00000313708 ZMYND15Q9H091 742 aa16.24■□□□□ 0.19
EBF1-201ENST00000313708 BECN1Q14457 450 aa16.24■□□□□ 0.19
EBF1-201ENST00000313708 FRAT1Q92837 279 aaPredicted RBP16.24■□□□□ 0.19
EBF1-201ENST00000313708 TCERG1O14776 1098 aaKnown RBP16.23■□□□□ 0.19
EBF1-201ENST00000313708 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
EBF1-201ENST00000313708 ARID3AQ99856 593 aa16.22■□□□□ 0.19
EBF1-201ENST00000313708 EEA1Q15075 1411 aa16.21■□□□□ 0.19
EBF1-201ENST00000313708 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
EBF1-201ENST00000313708 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
EBF1-201ENST00000313708 FAM43AQ8N2R8 423 aa16.19■□□□□ 0.18
EBF1-201ENST00000313708 RB1CC1Q8TDY2 1594 aa16.19■□□□□ 0.18
EBF1-201ENST00000313708 PDE4AP27815 886 aa16.18■□□□□ 0.18
EBF1-201ENST00000313708 CANXP27824 592 aaKnown RBP16.18■□□□□ 0.18
EBF1-201ENST00000313708 EIF4G2P78344 907 aaKnown RBP eCLIP16.18■□□□□ 0.18
EBF1-201ENST00000313708 PLEKHG5O94827 1062 aa16.17■□□□□ 0.18
EBF1-201ENST00000313708 NFKBIBQ15653 356 aa16.17■□□□□ 0.18
EBF1-201ENST00000313708 GZF1Q9H116 711 aaPredicted RBP16.14■□□□□ 0.17
EBF1-201ENST00000313708 RGS3P49796 1198 aa16.14■□□□□ 0.17
EBF1-201ENST00000313708 ABCC9O60706 1549 aa16.13■□□□□ 0.17
EBF1-201ENST00000313708 CDK11BP21127 795 aaKnown RBP16.11■□□□□ 0.17
EBF1-201ENST00000313708 GOLGA6L3A6NEY3 463 aa16.1■□□□□ 0.17
EBF1-201ENST00000313708 SOGA1O94964 1423 aa16.1■□□□□ 0.17
EBF1-201ENST00000313708 SLKQ9H2G2 1235 aaPredicted RBP16.09■□□□□ 0.17
EBF1-201ENST00000313708 NCLP19338 710 aaKnown RBP16.08■□□□□ 0.16
EBF1-201ENST00000313708 NUDCQ9Y266 331 aa16.07■□□□□ 0.16
EBF1-201ENST00000313708 PPP1R15AO75807 674 aaPredicted RBP16.07■□□□□ 0.16
EBF1-201ENST00000313708 SCRIBQ14160 1630 aa16.06■□□□□ 0.16
EBF1-201ENST00000313708 VPS8Q8N3P4 1428 aa16.05■□□□□ 0.16
EBF1-201ENST00000313708 RRP9O43818 475 aaKnown RBP16.05■□□□□ 0.16
EBF1-201ENST00000313708 CCNB3Q8WWL7 1395 aa16.05■□□□□ 0.16
EBF1-201ENST00000313708 SPRYD3Q8NCJ5 442 aa16.04■□□□□ 0.16
EBF1-201ENST00000313708 MSNP26038 577 aaKnown RBP16.03■□□□□ 0.16
EBF1-201ENST00000313708 RAB3GAP2Q9H2M9 1393 aa16.03■□□□□ 0.16
EBF1-201ENST00000313708 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.03■□□□□ 0.16
EBF1-201ENST00000313708 ZBED9Q6R2W3 1325 aa16.01■□□□□ 0.15
EBF1-201ENST00000313708 P3H3Q8IVL6 736 aa16.01■□□□□ 0.15
EBF1-201ENST00000313708 DNTTIP2Q5QJE6 756 aaKnown RBP16■□□□□ 0.15
EBF1-201ENST00000313708 KANK4Q5T7N3 995 aaPredicted RBP16■□□□□ 0.15
EBF1-201ENST00000313708 HSPA5P11021 654 aaKnown RBP15.99■□□□□ 0.15
EBF1-201ENST00000313708 CEP164Q9UPV0 1460 aa15.99■□□□□ 0.15
EBF1-201ENST00000313708 FRAT2O75474 233 aaPredicted RBP15.98■□□□□ 0.15
EBF1-201ENST00000313708 EXOC6Q8TAG9 804 aa15.97■□□□□ 0.15
EBF1-201ENST00000313708 MYH16Q9H6N6 1097 aa15.97■□□□□ 0.15
EBF1-201ENST00000313708 C11orf95C9JLR9 678 aaPredicted RBP15.96■□□□□ 0.15
EBF1-201ENST00000313708 RCAN3Q9UKA8 241 aa15.96■□□□□ 0.14
EBF1-201ENST00000313708 CCDC88BA6NC98 1476 aa15.95■□□□□ 0.14
EBF1-201ENST00000313708 SETD5Q9C0A6 1442 aa15.95■□□□□ 0.14
EBF1-201ENST00000313708 MS4A1P11836 297 aa15.94■□□□□ 0.14
EBF1-201ENST00000313708 FAM13BQ9NYF5 915 aa15.93■□□□□ 0.14
EBF1-201ENST00000313708 WASHC2AQ641Q2 1341 aa15.93■□□□□ 0.14
EBF1-201ENST00000313708 PTMAP06454 111 aaKnown RBP15.91■□□□□ 0.14
EBF1-201ENST00000313708 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
EBF1-201ENST00000313708 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
EBF1-201ENST00000313708 GOLGA6L22H0YM25 854 aa15.9■□□□□ 0.14
EBF1-201ENST00000313708 PDE4CQ08493 712 aa15.9■□□□□ 0.14
EBF1-201ENST00000313708 CHIC2Q9UKJ5 165 aa15.88■□□□□ 0.13
EBF1-201ENST00000313708 BACH2Q9BYV9 841 aa15.86■□□□□ 0.13
EBF1-201ENST00000313708 RRP1P56182 461 aaKnown RBP15.86■□□□□ 0.13
EBF1-201ENST00000313708 AKNAQ7Z591 1439 aa15.86■□□□□ 0.13
EBF1-201ENST00000313708 PRKRIP1Q9H875 184 aaPredicted RBP15.86■□□□□ 0.13
EBF1-201ENST00000313708 WASHC2CQ9Y4E1 1318 aa15.86■□□□□ 0.13
EBF1-201ENST00000313708 RBM10P98175 930 aaKnown RBP15.85■□□□□ 0.13
EBF1-201ENST00000313708 FAM161AQ3B820 660 aa15.85■□□□□ 0.13
EBF1-201ENST00000313708 TPM2P07951 284 aa15.84■□□□□ 0.13
EBF1-201ENST00000313708 PLIN1O60240 522 aa15.81■□□□□ 0.12
EBF1-201ENST00000313708 WDR43Q15061 677 aaKnown RBP eCLIP15.8■□□□□ 0.12
EBF1-201ENST00000313708 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
EBF1-201ENST00000313708 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
EBF1-201ENST00000313708 POGKQ9P215 609 aa15.78■□□□□ 0.12
EBF1-201ENST00000313708 HSCBQ8IWL3 235 aa15.78■□□□□ 0.12
EBF1-201ENST00000313708 HSP90AB1P08238 724 aaKnown RBP15.76■□□□□ 0.11
EBF1-201ENST00000313708 CCDC184Q52MB2 194 aa15.76■□□□□ 0.11
EBF1-201ENST00000313708 CRBNQ96SW2 442 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms