RNA–Protein interactions for RNA: ENST00000312295.4

RTP1-201, Transcript of receptor transporter protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1-201ENST00000312295 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
RTP1-201ENST00000312295 CTTNBP2Q8WZ74 1663 aa23.68■■□□□ 1.38
RTP1-201ENST00000312295 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.37
RTP1-201ENST00000312295 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
RTP1-201ENST00000312295 P3H3Q8IVL6 736 aa23.61■■□□□ 1.37
RTP1-201ENST00000312295 FHOD3Q2V2M9 1422 aa23.53■■□□□ 1.36
RTP1-201ENST00000312295 APLP2Q06481 763 aa23.49■■□□□ 1.35
RTP1-201ENST00000312295 FBLN2P98095 1184 aa23.47■■□□□ 1.35
RTP1-201ENST00000312295 EFCAB5A4FU69 1503 aa23.45■■□□□ 1.34
RTP1-201ENST00000312295 GRIN2AQ12879 1464 aa23.45■■□□□ 1.34
RTP1-201ENST00000312295 MAGI1Q96QZ7 1491 aaPredicted RBP23.45■■□□□ 1.34
RTP1-201ENST00000312295 IQGAP2Q13576 1575 aa23.43■■□□□ 1.34
RTP1-201ENST00000312295 PCF11O94913 1555 aaKnown RBP23.42■■□□□ 1.34
RTP1-201ENST00000312295 SAMD9Q5K651 1589 aa23.4■■□□□ 1.34
RTP1-201ENST00000312295 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
RTP1-201ENST00000312295 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
RTP1-201ENST00000312295 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
RTP1-201ENST00000312295 KANK4Q5T7N3 995 aaPredicted RBP23.37■■□□□ 1.33
RTP1-201ENST00000312295 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
RTP1-201ENST00000312295 KIAA0586Q9BVV6 1533 aa23.28■■□□□ 1.32
RTP1-201ENST00000312295 TIAM1Q13009 1591 aa23.28■■□□□ 1.32
RTP1-201ENST00000312295 FMN1Q68DA7 1419 aa23.26■■□□□ 1.31
RTP1-201ENST00000312295 FYCO1Q9BQS8 1478 aa23.25■■□□□ 1.31
RTP1-201ENST00000312295 UGGT2Q9NYU1 1516 aa23.24■■□□□ 1.31
RTP1-201ENST00000312295 CHD1O14646 1710 aa23.23■■□□□ 1.31
RTP1-201ENST00000312295 CASKIN1Q8WXD9 1431 aa23.23■■□□□ 1.31
RTP1-201ENST00000312295 CFAP43Q8NDM7 1665 aa23.22■■□□□ 1.31
RTP1-201ENST00000312295 NUP160Q12769 1436 aa23.21■■□□□ 1.31
RTP1-201ENST00000312295 KIAA0556O60303 1618 aa23.2■■□□□ 1.3
RTP1-201ENST00000312295 DISP1Q96F81 1524 aa23.2■■□□□ 1.3
RTP1-201ENST00000312295 LRRIQ1Q96JM4 1722 aa23.18■■□□□ 1.3
RTP1-201ENST00000312295 HRCP23327 699 aa23.16■■□□□ 1.3
RTP1-201ENST00000312295 LRRC9Q6ZRR7 1453 aa23.16■■□□□ 1.3
RTP1-201ENST00000312295 ARID3CA6NKF2 412 aa23.14■■□□□ 1.29
RTP1-201ENST00000312295 MAP3K1Q13233 1512 aa23.14■■□□□ 1.29
RTP1-201ENST00000312295 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
RTP1-201ENST00000312295 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
RTP1-201ENST00000312295 JPH4Q96JJ6 628 aa23.08■■□□□ 1.29
RTP1-201ENST00000312295 HECW1Q76N89 1606 aa23.06■■□□□ 1.28
RTP1-201ENST00000312295 CDK13Q14004 1512 aaKnown RBP23.04■■□□□ 1.28
RTP1-201ENST00000312295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
RTP1-201ENST00000312295 PHLDB1Q86UU1 1377 aa23.02■■□□□ 1.28
RTP1-201ENST00000312295 MTUS2Q5JR59 1369 aa23.01■■□□□ 1.27
RTP1-201ENST00000312295 CARMIL2Q6F5E8 1435 aa23■■□□□ 1.27
RTP1-201ENST00000312295 EPRSP07814 1512 aaKnown RBP22.99■■□□□ 1.27
RTP1-201ENST00000312295 MAGI3Q5TCQ9 1506 aa22.99■■□□□ 1.27
RTP1-201ENST00000312295 RRBP1Q9P2E9 1410 aaKnown RBP22.99■■□□□ 1.27
RTP1-201ENST00000312295 PLB1Q6P1J6 1458 aa22.98■■□□□ 1.27
RTP1-201ENST00000312295 RAPGEF6Q8TEU7 1601 aa22.98■■□□□ 1.27
RTP1-201ENST00000312295 PRG4Q92954 1404 aaPredicted RBP22.97■■□□□ 1.27
RTP1-201ENST00000312295 CCDC18Q5T9S5 1454 aa22.96■■□□□ 1.27
RTP1-201ENST00000312295 CCNB3Q8WWL7 1395 aa22.96■■□□□ 1.27
RTP1-201ENST00000312295 ITGAEP38570 1179 aa22.94■■□□□ 1.26
RTP1-201ENST00000312295 NUP153P49790 1475 aaKnown RBP22.94■■□□□ 1.26
RTP1-201ENST00000312295 EHBP1L1Q8N3D4 1523 aa22.92■■□□□ 1.26
RTP1-201ENST00000312295 ERCC6L2Q5T890 1561 aa22.91■■□□□ 1.26
RTP1-201ENST00000312295 CCER1Q8TC90 406 aaPredicted RBP22.88■■□□□ 1.25
RTP1-201ENST00000312295 SHROOM2Q13796 1616 aa22.88■■□□□ 1.25
RTP1-201ENST00000312295 NCOA2Q15596 1464 aa22.88■■□□□ 1.25
RTP1-201ENST00000312295 SUPT6HQ7KZ85 1726 aaKnown RBP22.87■■□□□ 1.25
RTP1-201ENST00000312295 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
RTP1-201ENST00000312295 CLASP1Q7Z460 1538 aa22.86■■□□□ 1.25
RTP1-201ENST00000312295 ABCA8O94911 1581 aa22.81■■□□□ 1.24
RTP1-201ENST00000312295 PTPRGP23470 1445 aa22.81■■□□□ 1.24
RTP1-201ENST00000312295 FGD6Q6ZV73 1430 aa22.8■■□□□ 1.24
RTP1-201ENST00000312295 MYOM3Q5VTT5 1437 aa22.76■■□□□ 1.23
RTP1-201ENST00000312295 ARHGEF11O15085 1522 aa22.76■■□□□ 1.23
RTP1-201ENST00000312295 KIF14Q15058 1648 aa22.7■■□□□ 1.22
RTP1-201ENST00000312295 ATP10BO94823 1461 aa22.69■■□□□ 1.22
RTP1-201ENST00000312295 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
RTP1-201ENST00000312295 CDK11AQ9UQ88 783 aaPredicted RBP22.67■■□□□ 1.22
RTP1-201ENST00000312295 ZEB1P37275 1124 aaPredicted RBP22.67■■□□□ 1.22
RTP1-201ENST00000312295 TROQ12816 1431 aaPredicted RBP22.67■■□□□ 1.22
RTP1-201ENST00000312295 UACAQ9BZF9 1416 aa22.66■■□□□ 1.22
RTP1-201ENST00000312295 PTPRKQ15262 1439 aa22.6■■□□□ 1.21
RTP1-201ENST00000312295 ABCC2Q92887 1545 aa22.6■■□□□ 1.21
RTP1-201ENST00000312295 RAB3GAP2Q9H2M9 1393 aa22.59■■□□□ 1.21
RTP1-201ENST00000312295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.59■■□□□ 1.21
RTP1-201ENST00000312295 ADCY10Q96PN6 1610 aa22.58■■□□□ 1.21
RTP1-201ENST00000312295 OSCARQ8IYS5 282 aa22.58■■□□□ 1.21
RTP1-201ENST00000312295 PLEKHD1A6NEE1 506 aa22.58■■□□□ 1.2
RTP1-201ENST00000312295 ZNF644Q9H582 1327 aaPredicted RBP22.55■■□□□ 1.2
RTP1-201ENST00000312295 TCOF1Q13428 1488 aaKnown RBP22.55■■□□□ 1.2
RTP1-201ENST00000312295 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
RTP1-201ENST00000312295 MIA2Q96PC5 1412 aa22.53■■□□□ 1.2
RTP1-201ENST00000312295 SETD5Q9C0A6 1442 aa22.53■■□□□ 1.2
RTP1-201ENST00000312295 CHIC2Q9UKJ5 165 aa22.51■■□□□ 1.19
RTP1-201ENST00000312295 ITSN2Q9NZM3 1697 aa22.51■■□□□ 1.19
RTP1-201ENST00000312295 ZCCHC11Q5TAX3 1644 aaKnown RBP22.5■■□□□ 1.19
RTP1-201ENST00000312295 GPATCH8Q9UKJ3 1502 aaKnown RBP22.5■■□□□ 1.19
RTP1-201ENST00000312295 ZNF777Q9ULD5 760 aaPredicted RBP22.5■■□□□ 1.19
RTP1-201ENST00000312295 CDC42BPAQ5VT25 1732 aa22.48■■□□□ 1.19
RTP1-201ENST00000312295 CFDP1Q9UEE9 299 aaPredicted RBP22.47■■□□□ 1.19
RTP1-201ENST00000312295 ABCC10Q5T3U5 1492 aa22.47■■□□□ 1.19
RTP1-201ENST00000312295 CAMSAP2Q08AD1 1489 aa22.46■■□□□ 1.19
RTP1-201ENST00000312295 RRP7BPQ9NSQ0 103 aa22.44■■□□□ 1.18
RTP1-201ENST00000312295 UHRF1BP1LA0JNW5 1464 aa22.43■■□□□ 1.18
RTP1-201ENST00000312295 TTC37Q6PGP7 1564 aa22.43■■□□□ 1.18
RTP1-201ENST00000312295 KCNH8Q96L42 1107 aa22.42■■□□□ 1.18
RTP1-201ENST00000312295 HFM1A2PYH4 1435 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms