RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 WRNQ14191 1432 aaPredicted RBP eCLIP9.51□□□□□ -0.897e-6■■■■■ 39.7
GAPVD1-203ENST00000312123 GOLGA3Q08378 1498 aa9.51□□□□□ -0.89
GAPVD1-203ENST00000312123 TNIKQ9UKE5 1360 aa9.5□□□□□ -0.89
GAPVD1-203ENST00000312123 STAG3Q9UJ98 1225 aa9.49□□□□□ -0.89
GAPVD1-203ENST00000312123 CECR2Q9BXF3 1484 aa9.49□□□□□ -0.89
GAPVD1-203ENST00000312123 HSP90AA1P07900 732 aaKnown RBP9.49□□□□□ -0.89
GAPVD1-203ENST00000312123 CHMP7Q8WUX9 453 aaPredicted RBP9.48□□□□□ -0.89
GAPVD1-203ENST00000312123 WDR43Q15061 677 aaKnown RBP eCLIP9.48□□□□□ -0.89
GAPVD1-203ENST00000312123 KCNH8Q96L42 1107 aa9.47□□□□□ -0.89
GAPVD1-203ENST00000312123 SOGA1O94964 1423 aa9.47□□□□□ -0.89
GAPVD1-203ENST00000312123 EEA1Q15075 1411 aa9.47□□□□□ -0.89
GAPVD1-203ENST00000312123 UPF2Q9HAU5 1272 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-203ENST00000312123 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.44□□□□□ -0.9
GAPVD1-203ENST00000312123 ESF1Q9H501 851 aaKnown RBP9.44□□□□□ -0.9
GAPVD1-203ENST00000312123 NPM1P06748 294 aaKnown RBP eCLIP9.42□□□□□ -0.9
GAPVD1-203ENST00000312123 NACADO15069 1562 aa9.42□□□□□ -0.9
GAPVD1-203ENST00000312123 KANK4Q5T7N3 995 aaPredicted RBP9.41□□□□□ -0.9
GAPVD1-203ENST00000312123 CFDP1Q9UEE9 299 aaPredicted RBP9.41□□□□□ -0.9
GAPVD1-203ENST00000312123 CEP164Q9UPV0 1460 aa9.41□□□□□ -0.9
GAPVD1-203ENST00000312123 PLEKHD1A6NEE1 506 aa9.4□□□□□ -0.9
GAPVD1-203ENST00000312123 B4GALNT3Q6L9W6 998 aa9.4□□□□□ -0.9
GAPVD1-203ENST00000312123 KIF27Q86VH2 1401 aa9.4□□□□□ -0.9
GAPVD1-203ENST00000312123 CARD11Q9BXL7 1154 aa9.4□□□□□ -0.91
GAPVD1-203ENST00000312123 PLEKHG5O94827 1062 aa9.39□□□□□ -0.91
GAPVD1-203ENST00000312123 NEUROD2Q15784 382 aa9.38□□□□□ -0.91
GAPVD1-203ENST00000312123 CCNB3Q8WWL7 1395 aa9.38□□□□□ -0.91
GAPVD1-203ENST00000312123 ANP32EQ9BTT0 268 aa9.37□□□□□ -0.91
GAPVD1-203ENST00000312123 BAZ1BQ9UIG0 1483 aaKnown RBP9.37□□□□□ -0.91
GAPVD1-203ENST00000312123 RB1CC1Q8TDY2 1594 aa9.36□□□□□ -0.91
GAPVD1-203ENST00000312123 FOXD1Q16676 465 aa9.35□□□□□ -0.91
GAPVD1-203ENST00000312123 ANP32BQ92688 251 aaKnown RBP9.35□□□□□ -0.91
GAPVD1-203ENST00000312123 TNNT2P45379 298 aaPredicted RBP9.33□□□□□ -0.92
GAPVD1-203ENST00000312123 RGS3P49796 1198 aa9.33□□□□□ -0.92
GAPVD1-203ENST00000312123 LAS1LQ9Y4W2 734 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-203ENST00000312123 KNSTRNQ9Y448 316 aa9.33□□□□□ -0.92
GAPVD1-203ENST00000312123 CCDC88BA6NC98 1476 aa9.33□□□□□ -0.92
GAPVD1-203ENST00000312123 CC2D1BQ5T0F9 858 aaKnown RBP9.33□□□□□ -0.92
GAPVD1-203ENST00000312123 PPP4R2Q9NY27 417 aa9.33□□□□□ -0.92
GAPVD1-203ENST00000312123 PPM1GO15355 546 aaPredicted RBP9.32□□□□□ -0.92
GAPVD1-203ENST00000312123 ABCC8Q09428 1581 aa9.32□□□□□ -0.92
GAPVD1-203ENST00000312123 CARMIL1Q5VZK9 1371 aa9.31□□□□□ -0.92
GAPVD1-203ENST00000312123 DCAF11Q8TEB1 546 aa9.3□□□□□ -0.92
GAPVD1-203ENST00000312123 MROH2BQ7Z745 1585 aa9.3□□□□□ -0.92
GAPVD1-203ENST00000312123 HSPA5P11021 654 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-203ENST00000312123 RTN4Q9NQC3 1192 aaKnown RBP9.29□□□□□ -0.92
GAPVD1-203ENST00000312123 VPS8Q8N3P4 1428 aa9.29□□□□□ -0.92
GAPVD1-203ENST00000312123 FRAT1Q92837 279 aaPredicted RBP9.29□□□□□ -0.92
GAPVD1-203ENST00000312123 BAZ1AQ9NRL2 1556 aaPredicted RBP9.28□□□□□ -0.92
GAPVD1-203ENST00000312123 RBM19Q9Y4C8 960 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-203ENST00000312123 CUX2O14529 1486 aa9.28□□□□□ -0.92
GAPVD1-203ENST00000312123 ZBTB7CA1YPR0 619 aa9.27□□□□□ -0.92
GAPVD1-203ENST00000312123 PPP1R15AO75807 674 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-203ENST00000312123 C14orf37Q86TY3 774 aa9.26□□□□□ -0.93
GAPVD1-203ENST00000312123 RAB3GAP2Q9H2M9 1393 aa9.26□□□□□ -0.93
GAPVD1-203ENST00000312123 MYH16Q9H6N6 1097 aa9.25□□□□□ -0.93
GAPVD1-203ENST00000312123 SETD5Q9C0A6 1442 aa9.25□□□□□ -0.93
GAPVD1-203ENST00000312123 NOP58Q9Y2X3 529 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-203ENST00000312123 BECN1Q14457 450 aa9.24□□□□□ -0.93
GAPVD1-203ENST00000312123 DDRGK1Q96HY6 314 aa9.24□□□□□ -0.93
GAPVD1-203ENST00000312123 CFAP53Q96M91 514 aa9.24□□□□□ -0.93
GAPVD1-203ENST00000312123 CCER2I3L3R5 266 aa9.24□□□□□ -0.93
GAPVD1-203ENST00000312123 PKD2Q13563 968 aa9.24□□□□□ -0.93
GAPVD1-203ENST00000312123 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
GAPVD1-203ENST00000312123 CDCA8Q53HL2 280 aa9.23□□□□□ -0.93
GAPVD1-203ENST00000312123 FTSJ3Q8IY81 847 aaKnown RBP9.23□□□□□ -0.93
GAPVD1-203ENST00000312123 FHAD1B1AJZ9 1412 aa9.23□□□□□ -0.93
GAPVD1-203ENST00000312123 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
GAPVD1-203ENST00000312123 U2SURPO15042 1029 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-203ENST00000312123 A0A0G2JS52 829 aa9.22□□□□□ -0.93
GAPVD1-203ENST00000312123 SAFB2Q14151 953 aaKnown RBP eCLIP9.22□□□□□ -0.93
GAPVD1-203ENST00000312123 TSHZ2Q9NRE2 1034 aa9.22□□□□□ -0.93
GAPVD1-203ENST00000312123 NCLP19338 710 aaKnown RBP9.21□□□□□ -0.94
GAPVD1-203ENST00000312123 TDRD9Q8NDG6 1382 aaKnown RBP9.21□□□□□ -0.94
GAPVD1-203ENST00000312123 MPHOSPH9Q99550 1183 aa9.2□□□□□ -0.94
GAPVD1-203ENST00000312123 L3MBTL2Q969R5 705 aa9.2□□□□□ -0.94
GAPVD1-203ENST00000312123 RUSC2Q8N2Y8 1516 aa9.19□□□□□ -0.94
GAPVD1-203ENST00000312123 TMF1P82094 1093 aa9.19□□□□□ -0.94
GAPVD1-203ENST00000312123 POGKQ9P215 609 aa9.19□□□□□ -0.94
GAPVD1-203ENST00000312123 MAPK8IP3Q9UPT6 1336 aa9.18□□□□□ -0.94
GAPVD1-203ENST00000312123 EIF4G1Q04637 1599 aaKnown RBP9.18□□□□□ -0.94
GAPVD1-203ENST00000312123 SOX12O15370 315 aa9.17□□□□□ -0.94
GAPVD1-203ENST00000312123 TRIM44Q96DX7 344 aaPredicted RBP9.17□□□□□ -0.94
GAPVD1-203ENST00000312123 SPRYD3Q8NCJ5 442 aa9.16□□□□□ -0.94
GAPVD1-203ENST00000312123 NUDCQ9Y266 331 aa9.16□□□□□ -0.94
GAPVD1-203ENST00000312123 ARID4BQ4LE39 1312 aaPredicted RBP9.16□□□□□ -0.94
GAPVD1-203ENST00000312123 DEKP35659 375 aaKnown RBP9.16□□□□□ -0.94
GAPVD1-203ENST00000312123 ARHGAP35Q9NRY4 1499 aa9.15□□□□□ -0.94
GAPVD1-203ENST00000312123 RAPGEF2Q9Y4G8 1499 aa9.15□□□□□ -0.94
GAPVD1-203ENST00000312123 GOLGA6L22H0YM25 854 aa9.14□□□□□ -0.95
GAPVD1-203ENST00000312123 GGT6Q6P531 493 aa9.14□□□□□ -0.95
GAPVD1-203ENST00000312123 LMOD2Q6P5Q4 547 aa9.14□□□□□ -0.95
GAPVD1-203ENST00000312123 RCAN3Q9UKA8 241 aa9.14□□□□□ -0.95
GAPVD1-203ENST00000312123 NUP155O75694 1391 aa9.13□□□□□ -0.95
GAPVD1-203ENST00000312123 STK26Q9P289 416 aa9.13□□□□□ -0.95
GAPVD1-203ENST00000312123 DHX57Q6P158 1386 aaKnown RBP9.13□□□□□ -0.95
GAPVD1-203ENST00000312123 MLECQ14165 292 aa9.13□□□□□ -0.95
GAPVD1-203ENST00000312123 GLIPR1L2Q4G1C9 344 aa9.13□□□□□ -0.95
GAPVD1-203ENST00000312123 WIZO95785 1651 aa9.13□□□□□ -0.95
GAPVD1-203ENST00000312123 MORC1Q86VD1 984 aa9.13□□□□□ -0.95
GAPVD1-203ENST00000312123 SRPK2P78362 688 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms