RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 ZNF608Q9ULD9 1512 aaPredicted RBP36.63■■■■□ 3.45
SNCB-201ENST00000310112 APLP2Q06481 763 aa36.6■■■■□ 3.45
SNCB-201ENST00000310112 EIF4G3O43432 1585 aaKnown RBP36.59■■■■□ 3.45
SNCB-201ENST00000310112 PPARGC1BQ86YN6 1023 aaKnown RBP36.49■■■■□ 3.43
SNCB-201ENST00000310112 MAGI1Q96QZ7 1491 aaPredicted RBP36.49■■■■□ 3.43
SNCB-201ENST00000310112 SNAPC4Q5SXM2 1469 aa36.43■■■■□ 3.42
SNCB-201ENST00000310112 MAP3K1Q13233 1512 aa36.39■■■■□ 3.42
SNCB-201ENST00000310112 SAMD9Q5K651 1589 aa36.38■■■■□ 3.42
SNCB-201ENST00000310112 IQGAP2Q13576 1575 aa36.32■■■■□ 3.41
SNCB-201ENST00000310112 SYNJ2O15056 1496 aa36.31■■■■□ 3.4
SNCB-201ENST00000310112 GRIN2AQ12879 1464 aa36.31■■■■□ 3.4
SNCB-201ENST00000310112 FMN1Q68DA7 1419 aa36.3■■■■□ 3.4
SNCB-201ENST00000310112 KIAA0586Q9BVV6 1533 aa36.25■■■■□ 3.39
SNCB-201ENST00000310112 FHOD3Q2V2M9 1422 aa36.25■■■■□ 3.39
SNCB-201ENST00000310112 FYCO1Q9BQS8 1478 aa36.23■■■■□ 3.39
SNCB-201ENST00000310112 CASKIN1Q8WXD9 1431 aa36.21■■■■□ 3.39
SNCB-201ENST00000310112 UGGT2Q9NYU1 1516 aa36.2■■■■□ 3.39
SNCB-201ENST00000310112 HRCP23327 699 aa36.2■■■■□ 3.39
SNCB-201ENST00000310112 PCF11O94913 1555 aaKnown RBP36.17■■■■□ 3.38
SNCB-201ENST00000310112 TIAM1Q13009 1591 aa36.17■■■■□ 3.38
SNCB-201ENST00000310112 P3H3Q8IVL6 736 aa36.15■■■■□ 3.38
SNCB-201ENST00000310112 TTBK1Q5TCY1 1321 aaPredicted RBP36.14■■■■□ 3.38
SNCB-201ENST00000310112 CHMP7Q8WUX9 453 aaPredicted RBP36.14■■■■□ 3.38
SNCB-201ENST00000310112 CFAP43Q8NDM7 1665 aa36.11■■■■□ 3.37
SNCB-201ENST00000310112 NUP160Q12769 1436 aa36.07■■■■□ 3.36
SNCB-201ENST00000310112 KANK4Q5T7N3 995 aaPredicted RBP36.04■■■■□ 3.36
SNCB-201ENST00000310112 CEP170Q5SW79 1584 aa36.01■■■■□ 3.35
SNCB-201ENST00000310112 LRRC9Q6ZRR7 1453 aa36■■■■□ 3.35
SNCB-201ENST00000310112 KIAA0556O60303 1618 aa35.93■■■■□ 3.34
SNCB-201ENST00000310112 DISP1Q96F81 1524 aa35.9■■■■□ 3.34
SNCB-201ENST00000310112 RRBP1Q9P2E9 1410 aaKnown RBP35.9■■■■□ 3.34
SNCB-201ENST00000310112 FBLN2P98095 1184 aa35.89■■■■□ 3.34
SNCB-201ENST00000310112 ZEB1P37275 1124 aaPredicted RBP35.88■■■■□ 3.33
SNCB-201ENST00000310112 HECW1Q76N89 1606 aa35.86■■■■□ 3.33
SNCB-201ENST00000310112 CCDC18Q5T9S5 1454 aa35.86■■■■□ 3.33
SNCB-201ENST00000310112 ATP1B4Q9UN42 357 aaPredicted RBP35.83■■■■□ 3.33
SNCB-201ENST00000310112 CARMIL2Q6F5E8 1435 aa35.82■■■■□ 3.32
SNCB-201ENST00000310112 JPH4Q96JJ6 628 aa35.75■■■■□ 3.31
SNCB-201ENST00000310112 CHD1O14646 1710 aa35.74■■■■□ 3.31
SNCB-201ENST00000310112 CCNB3Q8WWL7 1395 aa35.73■■■■□ 3.31
SNCB-201ENST00000310112 LRRIQ1Q96JM4 1722 aa35.72■■■■□ 3.31
SNCB-201ENST00000310112 EHBP1L1Q8N3D4 1523 aa35.69■■■■□ 3.3
SNCB-201ENST00000310112 MTUS2Q5JR59 1369 aa35.67■■■■□ 3.3
SNCB-201ENST00000310112 EPRSP07814 1512 aaKnown RBP35.65■■■■□ 3.3
SNCB-201ENST00000310112 RAPGEF6Q8TEU7 1601 aa35.64■■■■□ 3.3
SNCB-201ENST00000310112 PHLDB1Q86UU1 1377 aa35.61■■■■□ 3.29
SNCB-201ENST00000310112 HNRNPUL2Q1KMD3 747 aaKnown RBP35.59■■■■□ 3.29
SNCB-201ENST00000310112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.58■■■■□ 3.29
SNCB-201ENST00000310112 SUPT6HQ7KZ85 1726 aaKnown RBP35.58■■■■□ 3.29
SNCB-201ENST00000310112 SHROOM2Q13796 1616 aa35.54■■■■□ 3.28
SNCB-201ENST00000310112 CCER1Q8TC90 406 aaPredicted RBP35.51■■■■□ 3.27
SNCB-201ENST00000310112 NUP153P49790 1475 aaKnown RBP35.5■■■■□ 3.27
SNCB-201ENST00000310112 PRG4Q92954 1404 aaPredicted RBP35.48■■■■□ 3.27
SNCB-201ENST00000310112 NCOA2Q15596 1464 aa35.48■■■■□ 3.27
SNCB-201ENST00000310112 ARHGEF11O15085 1522 aa35.48■■■■□ 3.27
SNCB-201ENST00000310112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.46■■■■□ 3.27
SNCB-201ENST00000310112 CDK13Q14004 1512 aaKnown RBP35.44■■■■□ 3.26
SNCB-201ENST00000310112 CDK11AQ9UQ88 783 aaPredicted RBP35.44■■■■□ 3.26
SNCB-201ENST00000310112 MAGI3Q5TCQ9 1506 aa35.44■■■■□ 3.26
SNCB-201ENST00000310112 FGD6Q6ZV73 1430 aa35.42■■■■□ 3.26
SNCB-201ENST00000310112 ABCA8O94911 1581 aa35.42■■■■□ 3.26
SNCB-201ENST00000310112 MYOM3Q5VTT5 1437 aa35.41■■■■□ 3.26
SNCB-201ENST00000310112 CLASP1Q7Z460 1538 aa35.41■■■■□ 3.26
SNCB-201ENST00000310112 PLB1Q6P1J6 1458 aa35.37■■■■□ 3.25
SNCB-201ENST00000310112 PTPRGP23470 1445 aa35.34■■■■□ 3.25
SNCB-201ENST00000310112 FAM50AQ14320 339 aaKnown RBP35.28■■■■□ 3.24
SNCB-201ENST00000310112 MIA2Q96PC5 1412 aa35.28■■■■□ 3.24
SNCB-201ENST00000310112 TROQ12816 1431 aaPredicted RBP35.26■■■■□ 3.24
SNCB-201ENST00000310112 TCOF1Q13428 1488 aaKnown RBP35.23■■■■□ 3.23
SNCB-201ENST00000310112 ADCY10Q96PN6 1610 aa35.2■■■■□ 3.23
SNCB-201ENST00000310112 PTPN23Q9H3S7 1636 aa35.2■■■■□ 3.23
SNCB-201ENST00000310112 CLSPNQ9HAW4 1339 aa35.18■■■■□ 3.22
SNCB-201ENST00000310112 UACAQ9BZF9 1416 aa35.16■■■■□ 3.22
SNCB-201ENST00000310112 ATP10BO94823 1461 aa35.16■■■■□ 3.22
SNCB-201ENST00000310112 ITGAEP38570 1179 aa35.14■■■■□ 3.22
SNCB-201ENST00000310112 SETD5Q9C0A6 1442 aa35.14■■■■□ 3.22
SNCB-201ENST00000310112 ARID3CA6NKF2 412 aa35.13■■■■□ 3.21
SNCB-201ENST00000310112 PLEKHD1A6NEE1 506 aa35.08■■■■□ 3.21
SNCB-201ENST00000310112 ITSN2Q9NZM3 1697 aa35.06■■■■□ 3.2
SNCB-201ENST00000310112 ABCC2Q92887 1545 aa35.06■■■■□ 3.2
SNCB-201ENST00000310112 ERCC6L2Q5T890 1561 aa35.06■■■■□ 3.2
SNCB-201ENST00000310112 DHX57Q6P158 1386 aaKnown RBP35.03■■■■□ 3.2
SNCB-201ENST00000310112 RAB3GAP2Q9H2M9 1393 aa35.03■■■■□ 3.2
SNCB-201ENST00000310112 UHRF1BP1LA0JNW5 1464 aa35.03■■■■□ 3.2
SNCB-201ENST00000310112 KIF14Q15058 1648 aa35.02■■■■□ 3.2
SNCB-201ENST00000310112 HFM1A2PYH4 1435 aa34.95■■■■□ 3.19
SNCB-201ENST00000310112 AKNAQ7Z591 1439 aa34.94■■■■□ 3.18
SNCB-201ENST00000310112 OSCARQ8IYS5 282 aa34.92■■■■□ 3.18
SNCB-201ENST00000310112 GPATCH8Q9UKJ3 1502 aaKnown RBP34.92■■■■□ 3.18
SNCB-201ENST00000310112 PTPRKQ15262 1439 aa34.9■■■■□ 3.18
SNCB-201ENST00000310112 ABCC10Q5T3U5 1492 aa34.9■■■■□ 3.18
SNCB-201ENST00000310112 DNMT1P26358 1616 aaKnown RBP34.85■■■■□ 3.17
SNCB-201ENST00000310112 CFDP1Q9UEE9 299 aaPredicted RBP34.84■■■■□ 3.17
SNCB-201ENST00000310112 ACIN1Q9UKV3 1341 aaKnown RBP34.83■■■■□ 3.17
SNCB-201ENST00000310112 KDM5BQ9UGL1 1544 aa34.83■■■■□ 3.17
SNCB-201ENST00000310112 NAIPQ13075 1403 aa34.8■■■■□ 3.16
SNCB-201ENST00000310112 ROCK1Q13464 1354 aa34.8■■■■□ 3.16
SNCB-201ENST00000310112 CDC42BPAQ5VT25 1732 aa34.8■■■■□ 3.16
SNCB-201ENST00000310112 DAPK1P53355 1430 aa34.79■■■■□ 3.16
SNCB-201ENST00000310112 CAMSAP2Q08AD1 1489 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 321.8 ms