RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 IQSEC2Q5JU85 1478 aa5.03□□□□□ -1.6
RAPGEF6-202ENST00000308008 PABPN1Q86U42 306 aaKnown RBP eCLIP5.03□□□□□ -1.6
RAPGEF6-202ENST00000308008 EIF5BO60841 1220 aaKnown RBP5.01□□□□□ -1.61
RAPGEF6-202ENST00000308008 CLASP1Q7Z460 1538 aa5.01□□□□□ -1.61
RAPGEF6-202ENST00000308008 KIF21AQ7Z4S6 1674 aa5□□□□□ -1.61
RAPGEF6-202ENST00000308008 SPRYD3Q8NCJ5 442 aa5□□□□□ -1.61
RAPGEF6-202ENST00000308008 ANP32EQ9BTT0 268 aa5□□□□□ -1.61
RAPGEF6-202ENST00000308008 NESP48681 1621 aa5□□□□□ -1.61
RAPGEF6-202ENST00000308008 ARHGEF11O15085 1522 aa4.98□□□□□ -1.61
RAPGEF6-202ENST00000308008 ANO8Q9HCE9 1232 aaPredicted RBP4.98□□□□□ -1.61
RAPGEF6-202ENST00000308008 FBXO3Q9UK99 471 aa4.98□□□□□ -1.61
RAPGEF6-202ENST00000308008 MRC2Q9UBG0 1479 aa4.98□□□□□ -1.61
RAPGEF6-202ENST00000308008 ECM2O94769 699 aaPredicted RBP4.96□□□□□ -1.62
RAPGEF6-202ENST00000308008 CENPBP07199 599 aaPredicted RBP4.95□□□□□ -1.62
RAPGEF6-202ENST00000308008 BBXQ8WY36 941 aaPredicted RBP4.95□□□□□ -1.62
RAPGEF6-202ENST00000308008 KIF13AQ9H1H9 1805 aa4.95□□□□□ -1.62
RAPGEF6-202ENST00000308008 VASPP50552 380 aaPredicted RBP4.95□□□□□ -1.62
RAPGEF6-202ENST00000308008 NPM1P06748 294 aaKnown RBP eCLIP4.94□□□□□ -1.62
RAPGEF6-202ENST00000308008 CHGAP10645 457 aaKnown RBP4.94□□□□□ -1.62
RAPGEF6-202ENST00000308008 TRIM41Q8WV44 630 aa4.94□□□□□ -1.62
RAPGEF6-202ENST00000308008 PKD2Q13563 968 aa4.94□□□□□ -1.62
RAPGEF6-202ENST00000308008 ERCC6Q03468 1493 aa4.93□□□□□ -1.62
RAPGEF6-202ENST00000308008 IFNLR1Q8IU57 520 aaPredicted RBP4.91□□□□□ -1.62
RAPGEF6-202ENST00000308008 SHROOM2Q13796 1616 aa4.91□□□□□ -1.62
RAPGEF6-202ENST00000308008 NEUROD2Q15784 382 aa4.9□□□□□ -1.62
RAPGEF6-202ENST00000308008 MAPKBP1O60336 1514 aa4.89□□□□□ -1.63
RAPGEF6-202ENST00000308008 LOC105371045A0A1W2PR82 267 aa4.89□□□□□ -1.63
RAPGEF6-202ENST00000308008 ZEB1P37275 1124 aaPredicted RBP4.89□□□□□ -1.63
RAPGEF6-202ENST00000308008 GLI2P10070 1586 aa4.89□□□□□ -1.63
RAPGEF6-202ENST00000308008 TOP2BQ02880 1626 aa4.89□□□□□ -1.63
RAPGEF6-202ENST00000308008 MSH5O43196 834 aa4.88□□□□□ -1.63
RAPGEF6-202ENST00000308008 MYCNP04198 464 aaPredicted RBP4.88□□□□□ -1.63
RAPGEF6-202ENST00000308008 PDS5BQ9NTI5 1447 aa4.88□□□□□ -1.63
RAPGEF6-202ENST00000308008 MAPK8IP2Q13387 824 aaPredicted RBP4.88□□□□□ -1.63
RAPGEF6-202ENST00000308008 ZCCHC6Q5VYS8 1495 aaKnown RBP4.88□□□□□ -1.63
RAPGEF6-202ENST00000308008 ZBTB7CA1YPR0 619 aa4.87□□□□□ -1.63
RAPGEF6-202ENST00000308008 CCDC9Q9Y3X0 531 aaKnown RBP4.87□□□□□ -1.63
RAPGEF6-202ENST00000308008 PLEKHG5O94827 1062 aa4.87□□□□□ -1.63
RAPGEF6-202ENST00000308008 SALL2Q9Y467 1007 aaPredicted RBP4.87□□□□□ -1.63
RAPGEF6-202ENST00000308008 ARAP1Q96P48 1450 aa4.87□□□□□ -1.63
RAPGEF6-202ENST00000308008 UBE2Q2Q8WVN8 375 aa4.86□□□□□ -1.63
RAPGEF6-202ENST00000308008 SOCS7O14512 581 aa4.86□□□□□ -1.63
RAPGEF6-202ENST00000308008 SLC4A2P04920 1241 aa4.86□□□□□ -1.63
RAPGEF6-202ENST00000308008 SPDYE4A6NLX3 237 aa4.84□□□□□ -1.63
RAPGEF6-202ENST00000308008 RGL2O15211 777 aa4.84□□□□□ -1.63
RAPGEF6-202ENST00000308008 ATXN8OSP0DMR3 200 aa4.84□□□□□ -1.63
RAPGEF6-202ENST00000308008 FBXO41Q8TF61 875 aa4.84□□□□□ -1.63
RAPGEF6-202ENST00000308008 ABCC8Q09428 1581 aa4.84□□□□□ -1.63
RAPGEF6-202ENST00000308008 ARID3CA6NKF2 412 aa4.84□□□□□ -1.64
RAPGEF6-202ENST00000308008 ILDR1Q86SU0 546 aaPredicted RBP4.84□□□□□ -1.64
RAPGEF6-202ENST00000308008 CDK11BP21127 795 aaKnown RBP4.83□□□□□ -1.64
RAPGEF6-202ENST00000308008 CDK11AQ9UQ88 783 aaPredicted RBP4.83□□□□□ -1.64
RAPGEF6-202ENST00000308008 SUPT16HQ9Y5B9 1047 aaKnown RBP4.83□□□□□ -1.64
RAPGEF6-202ENST00000308008 TRHP20396 242 aaPredicted RBP4.83□□□□□ -1.64
RAPGEF6-202ENST00000308008 POLR3GLQ9BT43 218 aa4.83□□□□□ -1.64
RAPGEF6-202ENST00000308008 MYT1LQ9UL68 1186 aa4.83□□□□□ -1.64
RAPGEF6-202ENST00000308008 CIZ1Q9ULV3 898 aaPredicted RBP4.83□□□□□ -1.64
RAPGEF6-202ENST00000308008 PDIA4P13667 645 aaKnown RBP4.82□□□□□ -1.64
RAPGEF6-202ENST00000308008 DIEXFQ68CQ4 756 aaKnown RBP4.82□□□□□ -1.64
RAPGEF6-202ENST00000308008 CHD1O14646 1710 aa4.82□□□□□ -1.64
RAPGEF6-202ENST00000308008 IFT140Q96RY7 1462 aa4.81□□□□□ -1.64
RAPGEF6-202ENST00000308008 SMARCA4P51532 1647 aa4.8□□□□□ -1.64
RAPGEF6-202ENST00000308008 CCDC136Q96JN2 1154 aa4.8□□□□□ -1.64
RAPGEF6-202ENST00000308008 ATF5Q9Y2D1 282 aaPredicted RBP4.8□□□□□ -1.64
RAPGEF6-202ENST00000308008 KIAA0586Q9BVV6 1533 aa4.8□□□□□ -1.64
RAPGEF6-202ENST00000308008 ATAD2BQ9ULI0 1458 aa4.8□□□□□ -1.64
RAPGEF6-202ENST00000308008 LMTK3Q96Q04 1460 aa4.8□□□□□ -1.64
RAPGEF6-202ENST00000308008 BRPF1P55201 1214 aaPredicted RBP4.8□□□□□ -1.64
RAPGEF6-202ENST00000308008 OSCARQ8IYS5 282 aa4.79□□□□□ -1.64
RAPGEF6-202ENST00000308008 SPATA31D1Q6ZQQ2 1576 aa4.79□□□□□ -1.64
RAPGEF6-202ENST00000308008 AEBP1Q8IUX7 1158 aa4.78□□□□□ -1.64
RAPGEF6-202ENST00000308008 HECW2Q9P2P5 1572 aa4.78□□□□□ -1.64
RAPGEF6-202ENST00000308008 APBB1O00213 710 aa4.78□□□□□ -1.64
RAPGEF6-202ENST00000308008 SYNJ1O43426 1573 aa4.77□□□□□ -1.65
RAPGEF6-202ENST00000308008 MIER1Q8N108 512 aa4.77□□□□□ -1.65
RAPGEF6-202ENST00000308008 LMOD2Q6P5Q4 547 aa4.77□□□□□ -1.65
RAPGEF6-202ENST00000308008 RSPH6AQ9H0K4 717 aa4.77□□□□□ -1.65
RAPGEF6-202ENST00000308008 RAD21O60216 631 aa4.77□□□□□ -1.65
RAPGEF6-202ENST00000308008 TARBP1Q13395 1621 aaKnown RBP4.76□□□□□ -1.65
RAPGEF6-202ENST00000308008 PLCD3Q8N3E9 789 aa4.76□□□□□ -1.65
RAPGEF6-202ENST00000308008 RBM25P49756 843 aaKnown RBP4.75□□□□□ -1.65
RAPGEF6-202ENST00000308008 KCTD17Q8N5Z5 321 aa4.75□□□□□ -1.65
RAPGEF6-202ENST00000308008 SPOCK2Q92563 424 aa4.75□□□□□ -1.65
RAPGEF6-202ENST00000308008 PPRC1Q5VV67 1664 aaKnown RBP4.74□□□□□ -1.65
RAPGEF6-202ENST00000308008 DCAF8L1A6NGE4 600 aa4.74□□□□□ -1.65
RAPGEF6-202ENST00000308008 DIP2BQ9P265 1576 aa4.73□□□□□ -1.65
RAPGEF6-202ENST00000308008 ZMYND15Q9H091 742 aa4.73□□□□□ -1.65
RAPGEF6-202ENST00000308008 RNF216Q9NWF9 866 aaPredicted RBP4.73□□□□□ -1.65
RAPGEF6-202ENST00000308008 USP35Q9P2H5 1018 aa4.73□□□□□ -1.65
RAPGEF6-202ENST00000308008 RBM19Q9Y4C8 960 aaKnown RBP4.73□□□□□ -1.65
RAPGEF6-202ENST00000308008 EIF4G3O43432 1585 aaKnown RBP4.73□□□□□ -1.65
RAPGEF6-202ENST00000308008 IGSF3O75054 1194 aa4.72□□□□□ -1.65
RAPGEF6-202ENST00000308008 IL27Q8NEV9 243 aa4.72□□□□□ -1.65
RAPGEF6-202ENST00000308008 SLC24A3Q9HC58 644 aa4.72□□□□□ -1.65
RAPGEF6-202ENST00000308008 ADAMTSL3P82987 1691 aa4.72□□□□□ -1.65
RAPGEF6-202ENST00000308008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.72□□□□□ -1.65
RAPGEF6-202ENST00000308008 YTHDC1Q96MU7 727 aaKnown RBP4.72□□□□□ -1.65
RAPGEF6-202ENST00000308008 WDR70Q9NW82 654 aa4.72□□□□□ -1.65
RAPGEF6-202ENST00000308008 SCRIBQ14160 1630 aa4.71□□□□□ -1.66
RAPGEF6-202ENST00000308008 ZNF428Q96B54 188 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms