RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 FGD1P98174 961 aa10.64□□□□□ -0.71
PCNX1-201ENST00000304743 TPRNQ4KMQ1 711 aa10.64□□□□□ -0.71
PCNX1-201ENST00000304743 GTF3C3Q9Y5Q9 886 aa10.63□□□□□ -0.71
PCNX1-201ENST00000304743 A0A0U1RQG5 324 aaPredicted RBP10.62□□□□□ -0.71
PCNX1-201ENST00000304743 EIF4G2P78344 907 aaKnown RBP eCLIP10.62□□□□□ -0.71
PCNX1-201ENST00000304743 CASC1Q6TDU7 716 aa10.61□□□□□ -0.71
PCNX1-201ENST00000304743 ZNF777Q9ULD5 760 aaPredicted RBP10.61□□□□□ -0.71
PCNX1-201ENST00000304743 PLCB2Q00722 1185 aa10.61□□□□□ -0.71
PCNX1-201ENST00000304743 NAP1L2Q9ULW6 460 aaPredicted RBP10.6□□□□□ -0.71
PCNX1-201ENST00000304743 LMOD2Q6P5Q4 547 aa10.58□□□□□ -0.72
PCNX1-201ENST00000304743 CEP89Q96ST8 783 aa10.58□□□□□ -0.72
PCNX1-201ENST00000304743 PDE4CQ08493 712 aa10.57□□□□□ -0.72
PCNX1-201ENST00000304743 WDR43Q15061 677 aaKnown RBP eCLIP10.57□□□□□ -0.72
PCNX1-201ENST00000304743 SENP3Q9H4L4 574 aaPredicted RBP10.56□□□□□ -0.72
PCNX1-201ENST00000304743 SALL2Q9Y467 1007 aaPredicted RBP10.56□□□□□ -0.72
PCNX1-201ENST00000304743 NISCHQ9Y2I1 1504 aa10.55□□□□□ -0.72
PCNX1-201ENST00000304743 PPP1R15AO75807 674 aaPredicted RBP10.55□□□□□ -0.72
PCNX1-201ENST00000304743 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
PCNX1-201ENST00000304743 G3V3G9 751 aa10.54□□□□□ -0.72
PCNX1-201ENST00000304743 DCAF8Q5TAQ9 597 aa10.54□□□□□ -0.72
PCNX1-201ENST00000304743 CALRP27797 417 aaKnown RBP10.53□□□□□ -0.72
PCNX1-201ENST00000304743 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
PCNX1-201ENST00000304743 BECN1Q14457 450 aa10.52□□□□□ -0.72
PCNX1-201ENST00000304743 ARID4BQ4LE39 1312 aaPredicted RBP10.52□□□□□ -0.72
PCNX1-201ENST00000304743 KCNJ4P48050 445 aa10.52□□□□□ -0.73
PCNX1-201ENST00000304743 OS9Q13438 667 aaPredicted RBP10.5□□□□□ -0.73
PCNX1-201ENST00000304743 GOLGA6L4A6NEF3 574 aa10.49□□□□□ -0.73
PCNX1-201ENST00000304743 WWC1Q8IX03 1113 aa10.49□□□□□ -0.73
PCNX1-201ENST00000304743 GNL2Q13823 731 aaKnown RBP10.49□□□□□ -0.73
PCNX1-201ENST00000304743 ARID3CA6NKF2 412 aa10.48□□□□□ -0.73
PCNX1-201ENST00000304743 NBR1Q14596 966 aa10.47□□□□□ -0.73
PCNX1-201ENST00000304743 TMC1Q8TDI8 760 aa10.45□□□□□ -0.74
PCNX1-201ENST00000304743 CCDC136Q96JN2 1154 aa10.44□□□□□ -0.74
PCNX1-201ENST00000304743 PPP4R2Q9NY27 417 aa10.44□□□□□ -0.74
PCNX1-201ENST00000304743 USP35Q9P2H5 1018 aa10.44□□□□□ -0.74
PCNX1-201ENST00000304743 ANO8Q9HCE9 1232 aaPredicted RBP10.44□□□□□ -0.74
PCNX1-201ENST00000304743 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.44□□□□□ -0.74
PCNX1-201ENST00000304743 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
PCNX1-201ENST00000304743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.42□□□□□ -0.742e-6■□□□□ 9.8
PCNX1-201ENST00000304743 PPM1GO15355 546 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-201ENST00000304743 TNNT3P45378 269 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-201ENST00000304743 ERICH6BQ5W0A0 696 aa10.42□□□□□ -0.74
PCNX1-201ENST00000304743 CWC22Q9HCG8 908 aaKnown RBP10.41□□□□□ -0.74
PCNX1-201ENST00000304743 DRC7Q8IY82 874 aa10.41□□□□□ -0.74
PCNX1-201ENST00000304743 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
PCNX1-201ENST00000304743 GOLGA6L1Q8N7Z2 621 aa10.41□□□□□ -0.74
PCNX1-201ENST00000304743 VPS53Q5VIR6 699 aa10.4□□□□□ -0.74
PCNX1-201ENST00000304743 CCDC34Q96HJ3 373 aa10.39□□□□□ -0.75
PCNX1-201ENST00000304743 ACIN1Q9UKV3 1341 aaKnown RBP10.39□□□□□ -0.75
PCNX1-201ENST00000304743 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
PCNX1-201ENST00000304743 PAF1Q8N7H5 531 aa10.38□□□□□ -0.75
PCNX1-201ENST00000304743 RRP12Q5JTH9 1297 aaKnown RBP10.38□□□□□ -0.75
PCNX1-201ENST00000304743 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
PCNX1-201ENST00000304743 FAM9BQ8IZU0 186 aa10.37□□□□□ -0.75
PCNX1-201ENST00000304743 TCEAL9Q9UHQ7 104 aa10.37□□□□□ -0.75
PCNX1-201ENST00000304743 MARCH6O60337 910 aa10.35□□□□□ -0.75
PCNX1-201ENST00000304743 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.35□□□□□ -0.757e-8■■■■■ 186.3
PCNX1-201ENST00000304743 RASSF8Q8NHQ8 419 aa10.35□□□□□ -0.75
PCNX1-201ENST00000304743 DDRGK1Q96HY6 314 aa10.35□□□□□ -0.75
PCNX1-201ENST00000304743 FTSJ3Q8IY81 847 aaKnown RBP10.35□□□□□ -0.75
PCNX1-201ENST00000304743 NAP1L5Q96NT1 182 aaPredicted RBP10.35□□□□□ -0.75
PCNX1-201ENST00000304743 TPM4P67936 248 aa10.34□□□□□ -0.75
PCNX1-201ENST00000304743 CTDP1Q9Y5B0 961 aaPredicted RBP10.34□□□□□ -0.75
PCNX1-201ENST00000304743 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
PCNX1-201ENST00000304743 PHF23Q9BUL5 403 aaPredicted RBP10.33□□□□□ -0.76
PCNX1-201ENST00000304743 CFAP53Q96M91 514 aa10.32□□□□□ -0.76
PCNX1-201ENST00000304743 HNRNPUQ00839 825 aaKnown RBP eCLIP10.32□□□□□ -0.76
PCNX1-201ENST00000304743 LAS1LQ9Y4W2 734 aaKnown RBP10.32□□□□□ -0.76
PCNX1-201ENST00000304743 SETQ01105 290 aaPredicted RBP10.32□□□□□ -0.76
PCNX1-201ENST00000304743 CHMP4BQ9H444 224 aaKnown RBP10.31□□□□□ -0.76
PCNX1-201ENST00000304743 CREBRFQ8IUR6 639 aa10.31□□□□□ -0.76
PCNX1-201ENST00000304743 PATL2C9JE40 543 aaKnown RBP10.3□□□□□ -0.76
PCNX1-201ENST00000304743 AK7Q96M32 723 aa10.3□□□□□ -0.76
PCNX1-201ENST00000304743 ZNF330Q9Y3S2 320 aaPredicted RBP10.3□□□□□ -0.76
PCNX1-201ENST00000304743 AEBP2Q6ZN18 517 aaPredicted RBP10.3□□□□□ -0.76
PCNX1-201ENST00000304743 FRAT2O75474 233 aaPredicted RBP10.29□□□□□ -0.76
PCNX1-201ENST00000304743 MCCP23508 829 aa10.29□□□□□ -0.76
PCNX1-201ENST00000304743 MSNP26038 577 aaKnown RBP10.29□□□□□ -0.76
PCNX1-201ENST00000304743 NEUROD2Q15784 382 aa10.28□□□□□ -0.76
PCNX1-201ENST00000304743 R3HCC1Q9Y3T6 440 aaKnown RBP10.28□□□□□ -0.76
PCNX1-201ENST00000304743 PPM1FP49593 454 aaPredicted RBP10.27□□□□□ -0.77
PCNX1-201ENST00000304743 P3H3Q8IVL6 736 aa10.27□□□□□ -0.77
PCNX1-201ENST00000304743 MAPK8IP3Q9UPT6 1336 aa10.27□□□□□ -0.77
PCNX1-201ENST00000304743 HSP90AB1P08238 724 aaKnown RBP10.27□□□□□ -0.77
PCNX1-201ENST00000304743 TSPY4P0CV99 314 aa10.26□□□□□ -0.77
PCNX1-201ENST00000304743 TSPY10P0CW01 314 aa10.26□□□□□ -0.77
PCNX1-201ENST00000304743 TPM3P06753 285 aa10.26□□□□□ -0.77
PCNX1-201ENST00000304743 GTF2E1P29083 439 aaPredicted RBP10.26□□□□□ -0.77
PCNX1-201ENST00000304743 KDM2AQ9Y2K7 1162 aa10.25□□□□□ -0.77
PCNX1-201ENST00000304743 HTATSF1O43719 755 aaKnown RBP10.25□□□□□ -0.77
PCNX1-201ENST00000304743 CCDC97Q96F63 343 aaPredicted RBP10.25□□□□□ -0.77
PCNX1-201ENST00000304743 TAF7LQ5H9L4 462 aa10.24□□□□□ -0.77
PCNX1-201ENST00000304743 TRIM34Q9BYJ4 488 aa10.24□□□□□ -0.77
PCNX1-201ENST00000304743 NUDCQ9Y266 331 aa10.24□□□□□ -0.77
PCNX1-201ENST00000304743 WWC2Q6AWC2 1192 aa10.24□□□□□ -0.77
PCNX1-201ENST00000304743 GORABQ5T7V8 394 aa10.23□□□□□ -0.77
PCNX1-201ENST00000304743 KLHL34Q8N239 644 aa10.23□□□□□ -0.77
PCNX1-201ENST00000304743 MSH5O43196 834 aa10.23□□□□□ -0.77
PCNX1-201ENST00000304743 KIAA1211Q6ZU35 1233 aa10.23□□□□□ -0.77
PCNX1-201ENST00000304743 ODF2Q5BJF6 829 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms