RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
RAB40A-201ENST00000304236 ADAMTS12P58397 1594 aa22.01■■□□□ 1.11
RAB40A-201ENST00000304236 FHAD1B1AJZ9 1412 aa22■■□□□ 1.11
RAB40A-201ENST00000304236 CEP162Q5TB80 1403 aa22■■□□□ 1.11
RAB40A-201ENST00000304236 ERICH3Q5RHP9 1530 aa21.98■■□□□ 1.11
RAB40A-201ENST00000304236 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
RAB40A-201ENST00000304236 RUSC2Q8N2Y8 1516 aa21.96■■□□□ 1.11
RAB40A-201ENST00000304236 NUP160Q12769 1436 aa21.96■■□□□ 1.11
RAB40A-201ENST00000304236 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
RAB40A-201ENST00000304236 KIF21BO75037 1637 aa21.89■■□□□ 1.09
RAB40A-201ENST00000304236 UBTFP17480 764 aaKnown RBP21.88■■□□□ 1.09
RAB40A-201ENST00000304236 ERCC6L2Q5T890 1561 aa21.84■■□□□ 1.09
RAB40A-201ENST00000304236 SHROOM2Q13796 1616 aa21.81■■□□□ 1.08
RAB40A-201ENST00000304236 JPH4Q96JJ6 628 aa21.78■■□□□ 1.08
RAB40A-201ENST00000304236 KIF27Q86VH2 1401 aa21.77■■□□□ 1.08
RAB40A-201ENST00000304236 PRG4Q92954 1404 aaPredicted RBP21.76■■□□□ 1.07
RAB40A-201ENST00000304236 IGF1RP08069 1367 aa21.74■■□□□ 1.07
RAB40A-201ENST00000304236 CUL7Q14999 1698 aa21.66■■□□□ 1.06
RAB40A-201ENST00000304236 CLIP1P30622 1438 aa21.65■■□□□ 1.06
RAB40A-201ENST00000304236 KIAA0586Q9BVV6 1533 aa21.64■■□□□ 1.06
RAB40A-201ENST00000304236 CCER1Q8TC90 406 aaPredicted RBP21.62■■□□□ 1.05
RAB40A-201ENST00000304236 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
RAB40A-201ENST00000304236 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
RAB40A-201ENST00000304236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.58■■□□□ 1.05
RAB40A-201ENST00000304236 VPS8Q8N3P4 1428 aa21.57■■□□□ 1.04
RAB40A-201ENST00000304236 NPM1P06748 294 aaKnown RBP eCLIP21.56■■□□□ 1.04
RAB40A-201ENST00000304236 PRXQ9BXM0 1461 aa21.52■■□□□ 1.04
RAB40A-201ENST00000304236 TTBK1Q5TCY1 1321 aaPredicted RBP21.51■■□□□ 1.03
RAB40A-201ENST00000304236 APLP2Q06481 763 aa21.46■■□□□ 1.03
RAB40A-201ENST00000304236 CARMIL2Q6F5E8 1435 aa21.45■■□□□ 1.02
RAB40A-201ENST00000304236 PTPRGP23470 1445 aa21.45■■□□□ 1.02
RAB40A-201ENST00000304236 ADCY10Q96PN6 1610 aa21.44■■□□□ 1.02
RAB40A-201ENST00000304236 FAM69CQ0P6D2 419 aa21.43■■□□□ 1.02
RAB40A-201ENST00000304236 MAPKBP1O60336 1514 aa21.43■■□□□ 1.02
RAB40A-201ENST00000304236 KIF13AQ9H1H9 1805 aa21.42■■□□□ 1.02
RAB40A-201ENST00000304236 ABCC10Q5T3U5 1492 aa21.42■■□□□ 1.02
RAB40A-201ENST00000304236 IQGAP2Q13576 1575 aa21.42■■□□□ 1.02
RAB40A-201ENST00000304236 AEBP2Q6ZN18 517 aaPredicted RBP21.34■■□□□ 1.01
RAB40A-201ENST00000304236 DIP2BQ9P265 1576 aa21.33■■□□□ 1
RAB40A-201ENST00000304236 DISP1Q96F81 1524 aa21.3■■□□□ 1
RAB40A-201ENST00000304236 ABCC2Q92887 1545 aa21.29■■□□□ 1
RAB40A-201ENST00000304236 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
RAB40A-201ENST00000304236 UACAQ9BZF9 1416 aa21.27■■□□□ 1
RAB40A-201ENST00000304236 UHRF1BP1LA0JNW5 1464 aa21.27■■□□□ 1
RAB40A-201ENST00000304236 RANGAP1P46060 587 aaPredicted RBP21.26■□□□□ 0.99
RAB40A-201ENST00000304236 PLB1Q6P1J6 1458 aa21.22■□□□□ 0.99
RAB40A-201ENST00000304236 ASXL2Q76L83 1435 aa21.22■□□□□ 0.99
RAB40A-201ENST00000304236 HNRNPUL2Q1KMD3 747 aaKnown RBP21.21■□□□□ 0.99
RAB40A-201ENST00000304236 KIAA0556O60303 1618 aa21.21■□□□□ 0.99
RAB40A-201ENST00000304236 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
RAB40A-201ENST00000304236 ARHGAP35Q9NRY4 1499 aa21.16■□□□□ 0.98
RAB40A-201ENST00000304236 CTTNBP2Q8WZ74 1663 aa21.16■□□□□ 0.98
RAB40A-201ENST00000304236 TSPOAP1O95153 1857 aa21.15■□□□□ 0.98
RAB40A-201ENST00000304236 KDM6BO15054 1643 aa21.14■□□□□ 0.97
RAB40A-201ENST00000304236 GLI2P10070 1586 aa21.13■□□□□ 0.97
RAB40A-201ENST00000304236 DIEXFQ68CQ4 756 aaKnown RBP21.12■□□□□ 0.97
RAB40A-201ENST00000304236 ZCCHC11Q5TAX3 1644 aaKnown RBP21.08■□□□□ 0.97
RAB40A-201ENST00000304236 EPRSP07814 1512 aaKnown RBP21.08■□□□□ 0.96
RAB40A-201ENST00000304236 ZNF316A6NFI3 1004 aaPredicted RBP21.07■□□□□ 0.96
RAB40A-201ENST00000304236 RRBP1Q9P2E9 1410 aaKnown RBP21.07■□□□□ 0.96
RAB40A-201ENST00000304236 KANK4Q5T7N3 995 aaPredicted RBP21.06■□□□□ 0.96
RAB40A-201ENST00000304236 MAP3K1Q13233 1512 aa21.06■□□□□ 0.96
RAB40A-201ENST00000304236 CLSPNQ9HAW4 1339 aa21.05■□□□□ 0.96
RAB40A-201ENST00000304236 WDR7Q9Y4E6 1490 aa21.02■□□□□ 0.96
RAB40A-201ENST00000304236 ABCA8O94911 1581 aa21.01■□□□□ 0.95
RAB40A-201ENST00000304236 PPRC1Q5VV67 1664 aaKnown RBP21.01■□□□□ 0.95
RAB40A-201ENST00000304236 TEX14Q8IWB6 1497 aa20.99■□□□□ 0.95
RAB40A-201ENST00000304236 MAP3K4Q9Y6R4 1608 aa20.99■□□□□ 0.95
RAB40A-201ENST00000304236 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
RAB40A-201ENST00000304236 KCNH8Q96L42 1107 aa20.96■□□□□ 0.95
RAB40A-201ENST00000304236 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
RAB40A-201ENST00000304236 TIAM1Q13009 1591 aa20.95■□□□□ 0.94
RAB40A-201ENST00000304236 KDM4FA0A1W2PPD8 638 aa20.92■□□□□ 0.94
RAB40A-201ENST00000304236 DHX57Q6P158 1386 aaKnown RBP20.91■□□□□ 0.94
RAB40A-201ENST00000304236 COL17A1Q9UMD9 1497 aaPredicted RBP20.91■□□□□ 0.94
RAB40A-201ENST00000304236 CD109Q6YHK3 1445 aa20.9■□□□□ 0.94
RAB40A-201ENST00000304236 ARID3CA6NKF2 412 aa20.88■□□□□ 0.93
RAB40A-201ENST00000304236 SAMD9Q5K651 1589 aa20.88■□□□□ 0.93
RAB40A-201ENST00000304236 EFCAB5A4FU69 1503 aa20.88■□□□□ 0.93
RAB40A-201ENST00000304236 ATP10BO94823 1461 aa20.87■□□□□ 0.93
RAB40A-201ENST00000304236 MAGI3Q5TCQ9 1506 aa20.87■□□□□ 0.93
RAB40A-201ENST00000304236 LRRC9Q6ZRR7 1453 aa20.86■□□□□ 0.93
RAB40A-201ENST00000304236 CFAP43Q8NDM7 1665 aa20.86■□□□□ 0.93
RAB40A-201ENST00000304236 CENPBP07199 599 aaPredicted RBP20.85■□□□□ 0.93
RAB40A-201ENST00000304236 ACIN1Q9UKV3 1341 aaKnown RBP20.85■□□□□ 0.93
RAB40A-201ENST00000304236 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
RAB40A-201ENST00000304236 RAPGEF6Q8TEU7 1601 aa20.8■□□□□ 0.92
RAB40A-201ENST00000304236 PCF11O94913 1555 aaKnown RBP20.79■□□□□ 0.92
RAB40A-201ENST00000304236 FYCO1Q9BQS8 1478 aa20.79■□□□□ 0.92
RAB40A-201ENST00000304236 FHOD3Q2V2M9 1422 aa20.78■□□□□ 0.92
RAB40A-201ENST00000304236 CASKIN1Q8WXD9 1431 aa20.77■□□□□ 0.91
RAB40A-201ENST00000304236 ADGRL1O94910 1474 aa20.76■□□□□ 0.91
RAB40A-201ENST00000304236 NUP153P49790 1475 aaKnown RBP20.74■□□□□ 0.91
RAB40A-201ENST00000304236 NEUROD1Q13562 356 aa20.72■□□□□ 0.91
RAB40A-201ENST00000304236 FMN1Q68DA7 1419 aa20.72■□□□□ 0.91
RAB40A-201ENST00000304236 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
RAB40A-201ENST00000304236 ABCA9Q8IUA7 1624 aa20.72■□□□□ 0.91
RAB40A-201ENST00000304236 ARAP3Q8WWN8 1544 aa20.7■□□□□ 0.9
RAB40A-201ENST00000304236 PLEKHD1A6NEE1 506 aa20.7■□□□□ 0.9
RAB40A-201ENST00000304236 SETD5Q9C0A6 1442 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms