RNA–Protein interactions for RNA: ENST00000303077.6

SIX2-201, Transcript of SIX homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX2, Length 2,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2-201ENST00000303077 TIAM1Q13009 1591 aa36.07■■■■□ 3.37
SIX2-201ENST00000303077 FHOD3Q2V2M9 1422 aa36.06■■■■□ 3.36
SIX2-201ENST00000303077 EFCAB5A4FU69 1503 aa36.05■■■■□ 3.36
SIX2-201ENST00000303077 FHAD1B1AJZ9 1412 aa36.05■■■■□ 3.36
SIX2-201ENST00000303077 MAP3K1Q13233 1512 aa36.04■■■■□ 3.36
SIX2-201ENST00000303077 PCF11O94913 1555 aaKnown RBP36.03■■■■□ 3.36
SIX2-201ENST00000303077 RRBP1Q9P2E9 1410 aaKnown RBP36.01■■■■□ 3.36
SIX2-201ENST00000303077 PBRM1Q86U86 1689 aa35.98■■■■□ 3.35
SIX2-201ENST00000303077 AQRO60306 1485 aaKnown RBP eCLIP35.96■■■■□ 3.35
SIX2-201ENST00000303077 WDR62O43379 1518 aa35.92■■■■□ 3.34
SIX2-201ENST00000303077 LRRC9Q6ZRR7 1453 aa35.91■■■■□ 3.34
SIX2-201ENST00000303077 CFAP43Q8NDM7 1665 aa35.9■■■■□ 3.34
SIX2-201ENST00000303077 CCNB3Q8WWL7 1395 aa35.86■■■■□ 3.33
SIX2-201ENST00000303077 FYCO1Q9BQS8 1478 aa35.86■■■■□ 3.33
SIX2-201ENST00000303077 SAMD9Q5K651 1589 aa35.85■■■■□ 3.33
SIX2-201ENST00000303077 CASKIN1Q8WXD9 1431 aa35.84■■■■□ 3.33
SIX2-201ENST00000303077 ATP1B4Q9UN42 357 aaPredicted RBP35.83■■■■□ 3.33
SIX2-201ENST00000303077 IFT140Q96RY7 1462 aa35.82■■■■□ 3.32
SIX2-201ENST00000303077 ADAMTS12P58397 1594 aa35.81■■■■□ 3.32
SIX2-201ENST00000303077 ZNF608Q9ULD9 1512 aaPredicted RBP35.81■■■■□ 3.32
SIX2-201ENST00000303077 GRIN2BQ13224 1484 aa35.78■■■■□ 3.32
SIX2-201ENST00000303077 FMN1Q68DA7 1419 aa35.78■■■■□ 3.32
SIX2-201ENST00000303077 ERCC6Q03468 1493 aa35.75■■■■□ 3.31
SIX2-201ENST00000303077 SNAPC4Q5SXM2 1469 aa35.75■■■■□ 3.31
SIX2-201ENST00000303077 PHLDB1Q86UU1 1377 aa35.73■■■■□ 3.31
SIX2-201ENST00000303077 THOC2Q8NI27 1593 aaKnown RBP35.66■■■■□ 3.3
SIX2-201ENST00000303077 ITGAEP38570 1179 aa35.63■■■■□ 3.29
SIX2-201ENST00000303077 IQGAP2Q13576 1575 aa35.62■■■■□ 3.29
SIX2-201ENST00000303077 LRRIQ1Q96JM4 1722 aa35.6■■■■□ 3.29
SIX2-201ENST00000303077 EIF4G3O43432 1585 aaKnown RBP35.6■■■■□ 3.29
SIX2-201ENST00000303077 DHX57Q6P158 1386 aaKnown RBP35.59■■■■□ 3.29
SIX2-201ENST00000303077 FAM50AQ14320 339 aaKnown RBP35.47■■■■□ 3.27
SIX2-201ENST00000303077 CLSPNQ9HAW4 1339 aa35.44■■■■□ 3.26
SIX2-201ENST00000303077 MTUS2Q5JR59 1369 aa35.44■■■■□ 3.26
SIX2-201ENST00000303077 UGGT2Q9NYU1 1516 aa35.41■■■■□ 3.26
SIX2-201ENST00000303077 GRIN2AQ12879 1464 aa35.41■■■■□ 3.26
SIX2-201ENST00000303077 RAB3GAP2Q9H2M9 1393 aa35.38■■■■□ 3.25
SIX2-201ENST00000303077 KIAA0586Q9BVV6 1533 aa35.37■■■■□ 3.25
SIX2-201ENST00000303077 MAGI1Q96QZ7 1491 aaPredicted RBP35.33■■■■□ 3.25
SIX2-201ENST00000303077 FGD6Q6ZV73 1430 aa35.33■■■■□ 3.25
SIX2-201ENST00000303077 HECW1Q76N89 1606 aa35.32■■■■□ 3.24
SIX2-201ENST00000303077 SETD5Q9C0A6 1442 aa35.31■■■■□ 3.24
SIX2-201ENST00000303077 ZNF316A6NFI3 1004 aaPredicted RBP35.31■■■■□ 3.24
SIX2-201ENST00000303077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.31■■■■□ 3.24
SIX2-201ENST00000303077 MAGI3Q5TCQ9 1506 aa35.3■■■■□ 3.24
SIX2-201ENST00000303077 EHBP1L1Q8N3D4 1523 aa35.3■■■■□ 3.24
SIX2-201ENST00000303077 NCOA2Q15596 1464 aa35.3■■■■□ 3.24
SIX2-201ENST00000303077 CCDC18Q5T9S5 1454 aa35.3■■■■□ 3.24
SIX2-201ENST00000303077 DIEXFQ68CQ4 756 aaKnown RBP35.29■■■■□ 3.24
SIX2-201ENST00000303077 DISP1Q96F81 1524 aa35.28■■■■□ 3.24
SIX2-201ENST00000303077 SUPT6HQ7KZ85 1726 aaKnown RBP35.27■■■■□ 3.24
SIX2-201ENST00000303077 KIAA0556O60303 1618 aa35.26■■■■□ 3.23
SIX2-201ENST00000303077 SYNJ2O15056 1496 aa35.24■■■■□ 3.23
SIX2-201ENST00000303077 EPRSP07814 1512 aaKnown RBP35.23■■■■□ 3.23
SIX2-201ENST00000303077 CHMP7Q8WUX9 453 aaPredicted RBP35.21■■■■□ 3.23
SIX2-201ENST00000303077 CEP170Q5SW79 1584 aa35.21■■■■□ 3.23
SIX2-201ENST00000303077 MYOM3Q5VTT5 1437 aa35.2■■■■□ 3.23
SIX2-201ENST00000303077 CDK13Q14004 1512 aaKnown RBP35.19■■■■□ 3.22
SIX2-201ENST00000303077 ARHGEF11O15085 1522 aa35.18■■■■□ 3.22
SIX2-201ENST00000303077 MAPKBP1O60336 1514 aa35.15■■■■□ 3.22
SIX2-201ENST00000303077 FBLN2P98095 1184 aa35.14■■■■□ 3.22
SIX2-201ENST00000303077 ARID3CA6NKF2 412 aa35.12■■■■□ 3.21
SIX2-201ENST00000303077 PTPRKQ15262 1439 aa35.09■■■■□ 3.21
SIX2-201ENST00000303077 PTPN23Q9H3S7 1636 aa35.06■■■■□ 3.2
SIX2-201ENST00000303077 NUP160Q12769 1436 aa35.06■■■■□ 3.2
SIX2-201ENST00000303077 RAPGEF6Q8TEU7 1601 aa35.02■■■■□ 3.2
SIX2-201ENST00000303077 NUP153P49790 1475 aaKnown RBP35.02■■■■□ 3.2
SIX2-201ENST00000303077 TCOF1Q13428 1488 aaKnown RBP34.94■■■■□ 3.18
SIX2-201ENST00000303077 HFM1A2PYH4 1435 aa34.94■■■■□ 3.18
SIX2-201ENST00000303077 JPH4Q96JJ6 628 aa34.93■■■■□ 3.18
SIX2-201ENST00000303077 PLB1Q6P1J6 1458 aa34.88■■■■□ 3.17
SIX2-201ENST00000303077 NAIPQ13075 1403 aa34.86■■■■□ 3.17
SIX2-201ENST00000303077 CARMIL2Q6F5E8 1435 aa34.86■■■■□ 3.17
SIX2-201ENST00000303077 MIA2Q96PC5 1412 aa34.85■■■■□ 3.17
SIX2-201ENST00000303077 SIN3AQ96ST3 1273 aa34.83■■■■□ 3.17
SIX2-201ENST00000303077 NEUROD1Q13562 356 aa34.75■■■■□ 3.15
SIX2-201ENST00000303077 CDK11AQ9UQ88 783 aaPredicted RBP34.75■■■■□ 3.15
SIX2-201ENST00000303077 CHIC2Q9UKJ5 165 aa34.74■■■■□ 3.15
SIX2-201ENST00000303077 UACAQ9BZF9 1416 aa34.74■■■■□ 3.15
SIX2-201ENST00000303077 PRG4Q92954 1404 aaPredicted RBP34.74■■■■□ 3.15
SIX2-201ENST00000303077 RRP7BPQ9NSQ0 103 aa34.71■■■■□ 3.15
SIX2-201ENST00000303077 TROQ12816 1431 aaPredicted RBP34.71■■■■□ 3.15
SIX2-201ENST00000303077 GCC2Q8IWJ2 1684 aa34.69■■■■□ 3.14
SIX2-201ENST00000303077 CHD1O14646 1710 aa34.68■■■■□ 3.14
SIX2-201ENST00000303077 ABCA8O94911 1581 aa34.67■■■■□ 3.14
SIX2-201ENST00000303077 MIER1Q8N108 512 aa34.65■■■■□ 3.14
SIX2-201ENST00000303077 AKNAQ7Z591 1439 aa34.64■■■■□ 3.14
SIX2-201ENST00000303077 ZNF644Q9H582 1327 aaPredicted RBP34.62■■■■□ 3.13
SIX2-201ENST00000303077 KIF14Q15058 1648 aa34.61■■■■□ 3.13
SIX2-201ENST00000303077 KDM6BO15054 1643 aa34.61■■■■□ 3.13
SIX2-201ENST00000303077 ADCY10Q96PN6 1610 aa34.59■■■■□ 3.13
SIX2-201ENST00000303077 DAPK1P53355 1430 aa34.59■■■■□ 3.13
SIX2-201ENST00000303077 DNMT1P26358 1616 aaKnown RBP34.58■■■■□ 3.13
SIX2-201ENST00000303077 TIMELESSQ9UNS1 1208 aa34.57■■■■□ 3.12
SIX2-201ENST00000303077 ABCC5O15440 1437 aa34.55■■■■□ 3.12
SIX2-201ENST00000303077 ATP10BO94823 1461 aa34.54■■■■□ 3.12
SIX2-201ENST00000303077 PELP1Q8IZL8 1130 aaKnown RBP34.53■■■■□ 3.12
SIX2-201ENST00000303077 ITSN2Q9NZM3 1697 aa34.52■■■■□ 3.12
SIX2-201ENST00000303077 GPATCH8Q9UKJ3 1502 aaKnown RBP34.52■■■■□ 3.12
SIX2-201ENST00000303077 PTPRGP23470 1445 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms