RNA–Protein interactions for RNA: ENST00000301904.3

SCARA3-201, Transcript of scavenger receptor class A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARA3, Length 3,510 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-201ENST00000301904 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.09
SCARA3-201ENST00000301904 CNGB1Q14028 1251 aaPredicted RBP14.5□□□□□ -0.09
SCARA3-201ENST00000301904 PODXL2Q9NZ53 605 aa14.5□□□□□ -0.09
SCARA3-201ENST00000301904 IL27Q8NEV9 243 aa14.49□□□□□ -0.09
SCARA3-201ENST00000301904 UBE2Q2Q8WVN8 375 aa14.49□□□□□ -0.09
SCARA3-201ENST00000301904 RAB3GAP2Q9H2M9 1393 aa14.48□□□□□ -0.09
SCARA3-201ENST00000301904 FAM50AQ14320 339 aaKnown RBP14.48□□□□□ -0.09
SCARA3-201ENST00000301904 KIF21BO75037 1637 aa14.47□□□□□ -0.09
SCARA3-201ENST00000301904 BAZ1BQ9UIG0 1483 aaKnown RBP14.47□□□□□ -0.09
SCARA3-201ENST00000301904 NACADO15069 1562 aa14.46□□□□□ -0.09
SCARA3-201ENST00000301904 WDR97A6NE52 1622 aa14.46□□□□□ -0.09
SCARA3-201ENST00000301904 NOP58Q9Y2X3 529 aaKnown RBP14.45□□□□□ -0.1
SCARA3-201ENST00000301904 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
SCARA3-201ENST00000301904 ATP1B4Q9UN42 357 aaPredicted RBP14.45□□□□□ -0.1
SCARA3-201ENST00000301904 CCER2I3L3R5 266 aa14.43□□□□□ -0.1
SCARA3-201ENST00000301904 CCNB3Q8WWL7 1395 aa14.42□□□□□ -0.1
SCARA3-201ENST00000301904 MYT1LQ9UL68 1186 aa14.41□□□□□ -0.1
SCARA3-201ENST00000301904 FAM9BQ8IZU0 186 aa14.41□□□□□ -0.1
SCARA3-201ENST00000301904 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
SCARA3-201ENST00000301904 CCDC184Q52MB2 194 aa14.4□□□□□ -0.1
SCARA3-201ENST00000301904 PPP4R2Q9NY27 417 aa14.39□□□□□ -0.11
SCARA3-201ENST00000301904 TIMELESSQ9UNS1 1208 aa14.38□□□□□ -0.11
SCARA3-201ENST00000301904 NPM2Q86SE8 214 aaKnown RBP14.37□□□□□ -0.11
SCARA3-201ENST00000301904 MAPKBP1O60336 1514 aa14.36□□□□□ -0.11
SCARA3-201ENST00000301904 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
SCARA3-201ENST00000301904 A0A0U1RQG5 324 aaPredicted RBP14.32□□□□□ -0.12
SCARA3-201ENST00000301904 GLIPR1L2Q4G1C9 344 aa14.32□□□□□ -0.12
SCARA3-201ENST00000301904 LAS1LQ9Y4W2 734 aaKnown RBP14.32□□□□□ -0.12
SCARA3-201ENST00000301904 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
SCARA3-201ENST00000301904 P3H3Q8IVL6 736 aa14.31□□□□□ -0.12
SCARA3-201ENST00000301904 RRBP1Q9P2E9 1410 aaKnown RBP14.31□□□□□ -0.12
SCARA3-201ENST00000301904 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
SCARA3-201ENST00000301904 VSIG10Q8N0Z9 540 aa14.29□□□□□ -0.12
SCARA3-201ENST00000301904 SETD5Q9C0A6 1442 aa14.28□□□□□ -0.12
SCARA3-201ENST00000301904 ERICH6BQ5W0A0 696 aa14.28□□□□□ -0.12
SCARA3-201ENST00000301904 ANP32AP39687 249 aaKnown RBP14.27□□□□□ -0.12
SCARA3-201ENST00000301904 TONSLQ96HA7 1378 aa14.25□□□□□ -0.13
SCARA3-201ENST00000301904 MRS2Q9HD23 443 aa14.24□□□□□ -0.13
SCARA3-201ENST00000301904 IPO9Q96P70 1041 aaKnown RBP14.23□□□□□ -0.13
SCARA3-201ENST00000301904 SMARCA4P51532 1647 aa14.23□□□□□ -0.13
SCARA3-201ENST00000301904 NEFMP07197 916 aa14.2□□□□□ -0.14
SCARA3-201ENST00000301904 POLR3GLQ9BT43 218 aa14.2□□□□□ -0.14
SCARA3-201ENST00000301904 CUX2O14529 1486 aa14.19□□□□□ -0.14
SCARA3-201ENST00000301904 HSPA5P11021 654 aaKnown RBP14.18□□□□□ -0.14
SCARA3-201ENST00000301904 PHLDB1Q86UU1 1377 aa14.18□□□□□ -0.14
SCARA3-201ENST00000301904 BRPF3Q9ULD4 1205 aa14.18□□□□□ -0.14
SCARA3-201ENST00000301904 WASHC2AQ641Q2 1341 aa14.17□□□□□ -0.14
SCARA3-201ENST00000301904 AKNAQ7Z591 1439 aa14.15□□□□□ -0.14
SCARA3-201ENST00000301904 DAXXQ9UER7 740 aaPredicted RBP14.13□□□□□ -0.15
SCARA3-201ENST00000301904 C11orf95C9JLR9 678 aaPredicted RBP14.12□□□□□ -0.15
SCARA3-201ENST00000301904 SKAP1Q86WV1 359 aa14.11□□□□□ -0.15
SCARA3-201ENST00000301904 ARHGAP35Q9NRY4 1499 aa14.1□□□□□ -0.15
SCARA3-201ENST00000301904 SLC4A3P48751 1232 aa14.08□□□□□ -0.16
SCARA3-201ENST00000301904 PRKRIP1Q9H875 184 aaPredicted RBP14.08□□□□□ -0.16
SCARA3-201ENST00000301904 FOXD1Q16676 465 aa14.07□□□□□ -0.16
SCARA3-201ENST00000301904 CHIC2Q9UKJ5 165 aa14.06□□□□□ -0.16
SCARA3-201ENST00000301904 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
SCARA3-201ENST00000301904 ZBED9Q6R2W3 1325 aa14.05□□□□□ -0.16
SCARA3-201ENST00000301904 ZMYND15Q9H091 742 aa14.04□□□□□ -0.16
SCARA3-201ENST00000301904 EIF4G2P78344 907 aaKnown RBP eCLIP14.04□□□□□ -0.16
SCARA3-201ENST00000301904 RRP7BPQ9NSQ0 103 aa14.03□□□□□ -0.16
SCARA3-201ENST00000301904 ARID4BQ4LE39 1312 aaPredicted RBP14.02□□□□□ -0.17
SCARA3-201ENST00000301904 EXOC6Q8TAG9 804 aa13.99□□□□□ -0.17
SCARA3-201ENST00000301904 PDE4AP27815 886 aa13.98□□□□□ -0.17
SCARA3-201ENST00000301904 LRRC9Q6ZRR7 1453 aa13.98□□□□□ -0.17
SCARA3-201ENST00000301904 ARXQ96QS3 562 aa13.98□□□□□ -0.17
SCARA3-201ENST00000301904 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
SCARA3-201ENST00000301904 ZNF326Q5BKZ1 582 aaKnown RBP13.96□□□□□ -0.17
SCARA3-201ENST00000301904 FRAT1Q92837 279 aaPredicted RBP13.95□□□□□ -0.18
SCARA3-201ENST00000301904 AQRO60306 1485 aaKnown RBP eCLIP13.95□□□□□ -0.18
SCARA3-201ENST00000301904 L3MBTL2Q969R5 705 aa13.95□□□□□ -0.18
SCARA3-201ENST00000301904 CNTLNQ9NXG0 1405 aa13.94□□□□□ -0.18
SCARA3-201ENST00000301904 KIF27Q86VH2 1401 aa13.94□□□□□ -0.18
SCARA3-201ENST00000301904 TIAM1Q13009 1591 aa13.94□□□□□ -0.18
SCARA3-201ENST00000301904 ERICH3Q5RHP9 1530 aa13.93□□□□□ -0.18
SCARA3-201ENST00000301904 GSE1Q14687 1217 aa13.93□□□□□ -0.18
SCARA3-201ENST00000301904 CCDC18Q5T9S5 1454 aa13.93□□□□□ -0.18
SCARA3-201ENST00000301904 NAP1L5Q96NT1 182 aaPredicted RBP13.92□□□□□ -0.18
SCARA3-201ENST00000301904 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
SCARA3-201ENST00000301904 CCDC7Q96M83 1385 aa13.91□□□□□ -0.18
SCARA3-201ENST00000301904 PLIN1O60240 522 aa13.91□□□□□ -0.18
SCARA3-201ENST00000301904 NFKBIBQ15653 356 aa13.9□□□□□ -0.18
SCARA3-201ENST00000301904 PTPRKQ15262 1439 aa13.9□□□□□ -0.18
SCARA3-201ENST00000301904 TOP2BQ02880 1626 aa13.89□□□□□ -0.19
SCARA3-201ENST00000301904 WASHC2CQ9Y4E1 1318 aa13.89□□□□□ -0.19
SCARA3-201ENST00000301904 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
SCARA3-201ENST00000301904 NBPF8Q3BBV2 869 aa13.89□□□□□ -0.19
SCARA3-201ENST00000301904 KIF7Q2M1P5 1343 aa13.89□□□□□ -0.19
SCARA3-201ENST00000301904 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
SCARA3-201ENST00000301904 PDE4CQ08493 712 aa13.89□□□□□ -0.19
SCARA3-201ENST00000301904 BACH2Q9BYV9 841 aa13.88□□□□□ -0.19
SCARA3-201ENST00000301904 FHOD3Q2V2M9 1422 aa13.87□□□□□ -0.19
SCARA3-201ENST00000301904 TMC1Q8TDI8 760 aa13.87□□□□□ -0.19
SCARA3-201ENST00000301904 SMG6Q86US8 1419 aaKnown RBP13.87□□□□□ -0.19
SCARA3-201ENST00000301904 USP35Q9P2H5 1018 aa13.86□□□□□ -0.19
SCARA3-201ENST00000301904 TCERG1O14776 1098 aaKnown RBP13.85□□□□□ -0.19
SCARA3-201ENST00000301904 HSP90AA2PQ14568 343 aaPredicted RBP13.84□□□□□ -0.19
SCARA3-201ENST00000301904 RSPH6AQ9H0K4 717 aa13.84□□□□□ -0.19
SCARA3-201ENST00000301904 UACAQ9BZF9 1416 aa13.84□□□□□ -0.19
SCARA3-201ENST00000301904 FRAT2O75474 233 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms