RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
PGAP3-201ENST00000300658 FHOD3Q2V2M9 1422 aa24.86■■□□□ 1.57
PGAP3-201ENST00000300658 RRBP1Q9P2E9 1410 aaKnown RBP24.83■■□□□ 1.56
PGAP3-201ENST00000300658 TIAM1Q13009 1591 aa24.81■■□□□ 1.56
PGAP3-201ENST00000300658 MRC2Q9UBG0 1479 aa24.8■■□□□ 1.56
PGAP3-201ENST00000300658 CTTNBP2Q8WZ74 1663 aa24.79■■□□□ 1.56
PGAP3-201ENST00000300658 AQRO60306 1485 aaKnown RBP eCLIP24.78■■□□□ 1.56
PGAP3-201ENST00000300658 FHAD1B1AJZ9 1412 aa24.78■■□□□ 1.56
PGAP3-201ENST00000300658 ATP1B4Q9UN42 357 aaPredicted RBP24.77■■□□□ 1.56
PGAP3-201ENST00000300658 MAP3K1Q13233 1512 aa24.77■■□□□ 1.56
PGAP3-201ENST00000300658 PCF11O94913 1555 aaKnown RBP24.77■■□□□ 1.56
PGAP3-201ENST00000300658 LRRC9Q6ZRR7 1453 aa24.74■■□□□ 1.55
PGAP3-201ENST00000300658 CCNB3Q8WWL7 1395 aa24.74■■□□□ 1.55
PGAP3-201ENST00000300658 EFCAB5A4FU69 1503 aa24.73■■□□□ 1.55
PGAP3-201ENST00000300658 PHLDB1Q86UU1 1377 aa24.67■■□□□ 1.54
PGAP3-201ENST00000300658 ITGAEP38570 1179 aa24.67■■□□□ 1.54
PGAP3-201ENST00000300658 CASKIN1Q8WXD9 1431 aa24.67■■□□□ 1.54
PGAP3-201ENST00000300658 ZNF608Q9ULD9 1512 aaPredicted RBP24.66■■□□□ 1.54
PGAP3-201ENST00000300658 PBRM1Q86U86 1689 aa24.64■■□□□ 1.54
PGAP3-201ENST00000300658 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.53
PGAP3-201ENST00000300658 CFAP43Q8NDM7 1665 aa24.63■■□□□ 1.53
PGAP3-201ENST00000300658 WDR62O43379 1518 aa24.63■■□□□ 1.53
PGAP3-201ENST00000300658 SAMD9Q5K651 1589 aa24.62■■□□□ 1.53
PGAP3-201ENST00000300658 SNAPC4Q5SXM2 1469 aa24.6■■□□□ 1.53
PGAP3-201ENST00000300658 DHX57Q6P158 1386 aaKnown RBP24.6■■□□□ 1.53
PGAP3-201ENST00000300658 FMN1Q68DA7 1419 aa24.6■■□□□ 1.53
PGAP3-201ENST00000300658 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
PGAP3-201ENST00000300658 IFT140Q96RY7 1462 aa24.58■■□□□ 1.53
PGAP3-201ENST00000300658 ADAMTS12P58397 1594 aa24.56■■□□□ 1.52
PGAP3-201ENST00000300658 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
PGAP3-201ENST00000300658 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
PGAP3-201ENST00000300658 LRRIQ1Q96JM4 1722 aa24.48■■□□□ 1.51
PGAP3-201ENST00000300658 ACIN1Q9UKV3 1341 aaKnown RBP24.45■■□□□ 1.5
PGAP3-201ENST00000300658 DIEXFQ68CQ4 756 aaKnown RBP24.45■■□□□ 1.5
PGAP3-201ENST00000300658 IQGAP2Q13576 1575 aa24.45■■□□□ 1.5
PGAP3-201ENST00000300658 ZNF316A6NFI3 1004 aaPredicted RBP24.44■■□□□ 1.5
PGAP3-201ENST00000300658 NEUROD1Q13562 356 aa24.44■■□□□ 1.5
PGAP3-201ENST00000300658 RAB3GAP2Q9H2M9 1393 aa24.44■■□□□ 1.5
PGAP3-201ENST00000300658 THOC2Q8NI27 1593 aaKnown RBP24.44■■□□□ 1.5
PGAP3-201ENST00000300658 CLSPNQ9HAW4 1339 aa24.43■■□□□ 1.5
PGAP3-201ENST00000300658 MTUS2Q5JR59 1369 aa24.42■■□□□ 1.5
PGAP3-201ENST00000300658 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
PGAP3-201ENST00000300658 GTF3C3Q9Y5Q9 886 aa24.36■■□□□ 1.49
PGAP3-201ENST00000300658 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
PGAP3-201ENST00000300658 FGD6Q6ZV73 1430 aa24.34■■□□□ 1.49
PGAP3-201ENST00000300658 MAGI3Q5TCQ9 1506 aa24.34■■□□□ 1.49
PGAP3-201ENST00000300658 GRIN2AQ12879 1464 aa24.33■■□□□ 1.49
PGAP3-201ENST00000300658 UGGT2Q9NYU1 1516 aa24.33■■□□□ 1.49
PGAP3-201ENST00000300658 KIAA0586Q9BVV6 1533 aa24.32■■□□□ 1.48
PGAP3-201ENST00000300658 NCOA2Q15596 1464 aa24.31■■□□□ 1.48
PGAP3-201ENST00000300658 ARID3CA6NKF2 412 aa24.31■■□□□ 1.48
PGAP3-201ENST00000300658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.3■■□□□ 1.48
PGAP3-201ENST00000300658 DISP1Q96F81 1524 aa24.28■■□□□ 1.48
PGAP3-201ENST00000300658 CHMP7Q8WUX9 453 aaPredicted RBP24.26■■□□□ 1.47
PGAP3-201ENST00000300658 PTPRKQ15262 1439 aa24.26■■□□□ 1.47
PGAP3-201ENST00000300658 MAPKBP1O60336 1514 aa24.26■■□□□ 1.47
PGAP3-201ENST00000300658 FBLN2P98095 1184 aa24.25■■□□□ 1.47
PGAP3-201ENST00000300658 EPRSP07814 1512 aaKnown RBP24.25■■□□□ 1.47
PGAP3-201ENST00000300658 CDK13Q14004 1512 aaKnown RBP24.24■■□□□ 1.47
PGAP3-201ENST00000300658 MAGI1Q96QZ7 1491 aaPredicted RBP24.24■■□□□ 1.47
PGAP3-201ENST00000300658 MYOM3Q5VTT5 1437 aa24.24■■□□□ 1.47
PGAP3-201ENST00000300658 EHBP1L1Q8N3D4 1523 aa24.23■■□□□ 1.47
PGAP3-201ENST00000300658 CCDC18Q5T9S5 1454 aa24.23■■□□□ 1.47
PGAP3-201ENST00000300658 HECW1Q76N89 1606 aa24.22■■□□□ 1.47
PGAP3-201ENST00000300658 SUPT6HQ7KZ85 1726 aaKnown RBP24.21■■□□□ 1.47
PGAP3-201ENST00000300658 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
PGAP3-201ENST00000300658 SYNJ2O15056 1496 aa24.21■■□□□ 1.47
PGAP3-201ENST00000300658 KIAA0556O60303 1618 aa24.2■■□□□ 1.47
PGAP3-201ENST00000300658 CEP170Q5SW79 1584 aa24.2■■□□□ 1.46
PGAP3-201ENST00000300658 SIN3AQ96ST3 1273 aa24.14■■□□□ 1.46
PGAP3-201ENST00000300658 NUP153P49790 1475 aaKnown RBP24.11■■□□□ 1.45
PGAP3-201ENST00000300658 PTPN23Q9H3S7 1636 aa24.11■■□□□ 1.45
PGAP3-201ENST00000300658 JPH4Q96JJ6 628 aa24.1■■□□□ 1.45
PGAP3-201ENST00000300658 NUP160Q12769 1436 aa24.1■■□□□ 1.45
PGAP3-201ENST00000300658 HFM1A2PYH4 1435 aa24.07■■□□□ 1.44
PGAP3-201ENST00000300658 PRKCSHP14314 528 aaPredicted RBP24.07■■□□□ 1.44
PGAP3-201ENST00000300658 NAIPQ13075 1403 aa24.06■■□□□ 1.44
PGAP3-201ENST00000300658 MIER1Q8N108 512 aa24.05■■□□□ 1.44
PGAP3-201ENST00000300658 CHIC2Q9UKJ5 165 aa24.04■■□□□ 1.44
PGAP3-201ENST00000300658 RAPGEF6Q8TEU7 1601 aa24.04■■□□□ 1.44
PGAP3-201ENST00000300658 TCOF1Q13428 1488 aaKnown RBP24.04■■□□□ 1.44
PGAP3-201ENST00000300658 PLB1Q6P1J6 1458 aa24.04■■□□□ 1.44
PGAP3-201ENST00000300658 RRP7BPQ9NSQ0 103 aa24.01■■□□□ 1.43
PGAP3-201ENST00000300658 MIA2Q96PC5 1412 aa23.97■■□□□ 1.43
PGAP3-201ENST00000300658 CENPBP07199 599 aaPredicted RBP23.97■■□□□ 1.43
PGAP3-201ENST00000300658 PRG4Q92954 1404 aaPredicted RBP23.96■■□□□ 1.43
PGAP3-201ENST00000300658 ZNF644Q9H582 1327 aaPredicted RBP23.96■■□□□ 1.43
PGAP3-201ENST00000300658 CARMIL2Q6F5E8 1435 aa23.95■■□□□ 1.42
PGAP3-201ENST00000300658 UACAQ9BZF9 1416 aa23.94■■□□□ 1.42
PGAP3-201ENST00000300658 CDK11AQ9UQ88 783 aaPredicted RBP23.91■■□□□ 1.42
PGAP3-201ENST00000300658 TROQ12816 1431 aaPredicted RBP23.88■■□□□ 1.41
PGAP3-201ENST00000300658 KDM6BO15054 1643 aa23.87■■□□□ 1.41
PGAP3-201ENST00000300658 PPP1R15AO75807 674 aaPredicted RBP23.84■■□□□ 1.41
PGAP3-201ENST00000300658 TIMELESSQ9UNS1 1208 aa23.83■■□□□ 1.41
PGAP3-201ENST00000300658 ABCC5O15440 1437 aa23.83■■□□□ 1.41
PGAP3-201ENST00000300658 DAPK1P53355 1430 aa23.82■■□□□ 1.4
PGAP3-201ENST00000300658 BCL11AQ9H165 835 aa23.82■■□□□ 1.4
PGAP3-201ENST00000300658 DENND4BO75064 1496 aaPredicted RBP23.81■■□□□ 1.4
PGAP3-201ENST00000300658 ABCA8O94911 1581 aa23.81■■□□□ 1.4
PGAP3-201ENST00000300658 KIF14Q15058 1648 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms