RNA–Protein interactions for RNA: ENST00000300181.6

TSC22D4-201, Transcript of TSC22 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D4, Length 2,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-201ENST00000300181 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
TSC22D4-201ENST00000300181 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
TSC22D4-201ENST00000300181 KANK4Q5T7N3 995 aaPredicted RBP25.33■■□□□ 1.65
TSC22D4-201ENST00000300181 GRIN2BQ13224 1484 aa25.3■■□□□ 1.64
TSC22D4-201ENST00000300181 FHOD3Q2V2M9 1422 aa25.3■■□□□ 1.64
TSC22D4-201ENST00000300181 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
TSC22D4-201ENST00000300181 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
TSC22D4-201ENST00000300181 FHAD1B1AJZ9 1412 aa25.27■■□□□ 1.64
TSC22D4-201ENST00000300181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.24■■□□□ 1.63
TSC22D4-201ENST00000300181 EFCAB5A4FU69 1503 aa25.23■■□□□ 1.63
TSC22D4-201ENST00000300181 PCF11O94913 1555 aaKnown RBP25.21■■□□□ 1.63
TSC22D4-201ENST00000300181 ATP1B4Q9UN42 357 aaPredicted RBP25.21■■□□□ 1.63
TSC22D4-201ENST00000300181 ZEB1P37275 1124 aaPredicted RBP25.2■■□□□ 1.63
TSC22D4-201ENST00000300181 SNAPC4Q5SXM2 1469 aa25.19■■□□□ 1.62
TSC22D4-201ENST00000300181 HNRNPUL2Q1KMD3 747 aaKnown RBP25.18■■□□□ 1.62
TSC22D4-201ENST00000300181 TIAM1Q13009 1591 aa25.15■■□□□ 1.62
TSC22D4-201ENST00000300181 SAMD9Q5K651 1589 aa25.15■■□□□ 1.62
TSC22D4-201ENST00000300181 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
TSC22D4-201ENST00000300181 IQGAP2Q13576 1575 aa25.1■■□□□ 1.61
TSC22D4-201ENST00000300181 CFAP43Q8NDM7 1665 aa25.06■■□□□ 1.6
TSC22D4-201ENST00000300181 FYCO1Q9BQS8 1478 aa25.06■■□□□ 1.6
TSC22D4-201ENST00000300181 MAP3K1Q13233 1512 aa25.05■■□□□ 1.6
TSC22D4-201ENST00000300181 FMN1Q68DA7 1419 aa25.05■■□□□ 1.6
TSC22D4-201ENST00000300181 CASKIN1Q8WXD9 1431 aa25.04■■□□□ 1.6
TSC22D4-201ENST00000300181 GRIN2AQ12879 1464 aa25.04■■□□□ 1.6
TSC22D4-201ENST00000300181 LRRC9Q6ZRR7 1453 aa25.03■■□□□ 1.6
TSC22D4-201ENST00000300181 FBLN2P98095 1184 aa25.03■■□□□ 1.6
TSC22D4-201ENST00000300181 MAGI1Q96QZ7 1491 aaPredicted RBP25.01■■□□□ 1.59
TSC22D4-201ENST00000300181 CHMP7Q8WUX9 453 aaPredicted RBP25■■□□□ 1.59
TSC22D4-201ENST00000300181 LRRIQ1Q96JM4 1722 aa24.99■■□□□ 1.59
TSC22D4-201ENST00000300181 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
TSC22D4-201ENST00000300181 RRBP1Q9P2E9 1410 aaKnown RBP24.95■■□□□ 1.59
TSC22D4-201ENST00000300181 KIAA0586Q9BVV6 1533 aa24.93■■□□□ 1.58
TSC22D4-201ENST00000300181 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
TSC22D4-201ENST00000300181 CCNB3Q8WWL7 1395 aa24.91■■□□□ 1.58
TSC22D4-201ENST00000300181 UGGT2Q9NYU1 1516 aa24.91■■□□□ 1.58
TSC22D4-201ENST00000300181 PHLDB1Q86UU1 1377 aa24.9■■□□□ 1.58
TSC22D4-201ENST00000300181 ITGAEP38570 1179 aa24.88■■□□□ 1.57
TSC22D4-201ENST00000300181 KIAA0556O60303 1618 aa24.84■■□□□ 1.57
TSC22D4-201ENST00000300181 DISP1Q96F81 1524 aa24.84■■□□□ 1.57
TSC22D4-201ENST00000300181 ARID3CA6NKF2 412 aa24.82■■□□□ 1.56
TSC22D4-201ENST00000300181 MTUS2Q5JR59 1369 aa24.82■■□□□ 1.56
TSC22D4-201ENST00000300181 HECW1Q76N89 1606 aa24.78■■□□□ 1.56
TSC22D4-201ENST00000300181 NUP160Q12769 1436 aa24.77■■□□□ 1.56
TSC22D4-201ENST00000300181 FAM50AQ14320 339 aaKnown RBP24.77■■□□□ 1.56
TSC22D4-201ENST00000300181 CDK13Q14004 1512 aaKnown RBP24.74■■□□□ 1.55
TSC22D4-201ENST00000300181 MAGI3Q5TCQ9 1506 aa24.73■■□□□ 1.55
TSC22D4-201ENST00000300181 CHD1O14646 1710 aa24.72■■□□□ 1.55
TSC22D4-201ENST00000300181 EPRSP07814 1512 aaKnown RBP24.72■■□□□ 1.55
TSC22D4-201ENST00000300181 JPH4Q96JJ6 628 aa24.72■■□□□ 1.55
TSC22D4-201ENST00000300181 CCDC18Q5T9S5 1454 aa24.71■■□□□ 1.55
TSC22D4-201ENST00000300181 SUPT6HQ7KZ85 1726 aaKnown RBP24.69■■□□□ 1.54
TSC22D4-201ENST00000300181 EHBP1L1Q8N3D4 1523 aa24.68■■□□□ 1.54
TSC22D4-201ENST00000300181 NCOA2Q15596 1464 aa24.67■■□□□ 1.54
TSC22D4-201ENST00000300181 RAPGEF6Q8TEU7 1601 aa24.65■■□□□ 1.54
TSC22D4-201ENST00000300181 FGD6Q6ZV73 1430 aa24.63■■□□□ 1.53
TSC22D4-201ENST00000300181 CARMIL2Q6F5E8 1435 aa24.62■■□□□ 1.53
TSC22D4-201ENST00000300181 NUP153P49790 1475 aaKnown RBP24.61■■□□□ 1.53
TSC22D4-201ENST00000300181 PLB1Q6P1J6 1458 aa24.6■■□□□ 1.53
TSC22D4-201ENST00000300181 MYOM3Q5VTT5 1437 aa24.57■■□□□ 1.52
TSC22D4-201ENST00000300181 DHX57Q6P158 1386 aaKnown RBP24.57■■□□□ 1.52
TSC22D4-201ENST00000300181 RAB3GAP2Q9H2M9 1393 aa24.55■■□□□ 1.52
TSC22D4-201ENST00000300181 ARHGEF11O15085 1522 aa24.54■■□□□ 1.52
TSC22D4-201ENST00000300181 PRG4Q92954 1404 aaPredicted RBP24.52■■□□□ 1.52
TSC22D4-201ENST00000300181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.5■■□□□ 1.511e-6■■■□□ 16.2
TSC22D4-201ENST00000300181 PTPN23Q9H3S7 1636 aa24.5■■□□□ 1.51
TSC22D4-201ENST00000300181 SETD5Q9C0A6 1442 aa24.49■■□□□ 1.51
TSC22D4-201ENST00000300181 PTPRKQ15262 1439 aa24.44■■□□□ 1.5
TSC22D4-201ENST00000300181 CDK11AQ9UQ88 783 aaPredicted RBP24.42■■□□□ 1.5
TSC22D4-201ENST00000300181 ABCA8O94911 1581 aa24.42■■□□□ 1.5
TSC22D4-201ENST00000300181 SHROOM2Q13796 1616 aa24.39■■□□□ 1.5
TSC22D4-201ENST00000300181 ERCC6L2Q5T890 1561 aa24.39■■□□□ 1.49
TSC22D4-201ENST00000300181 PTPRGP23470 1445 aa24.39■■□□□ 1.49
TSC22D4-201ENST00000300181 TROQ12816 1431 aaPredicted RBP24.36■■□□□ 1.49
TSC22D4-201ENST00000300181 CLSPNQ9HAW4 1339 aa24.36■■□□□ 1.49
TSC22D4-201ENST00000300181 KIF14Q15058 1648 aa24.35■■□□□ 1.49
TSC22D4-201ENST00000300181 TCOF1Q13428 1488 aaKnown RBP24.35■■□□□ 1.49
TSC22D4-201ENST00000300181 CHIC2Q9UKJ5 165 aa24.34■■□□□ 1.49
TSC22D4-201ENST00000300181 ATP10BO94823 1461 aa24.33■■□□□ 1.49
TSC22D4-201ENST00000300181 MIA2Q96PC5 1412 aa24.32■■□□□ 1.48
TSC22D4-201ENST00000300181 MAPKBP1O60336 1514 aa24.3■■□□□ 1.48
TSC22D4-201ENST00000300181 ZNF644Q9H582 1327 aaPredicted RBP24.29■■□□□ 1.48
TSC22D4-201ENST00000300181 CLASP1Q7Z460 1538 aa24.29■■□□□ 1.48
TSC22D4-201ENST00000300181 HFM1A2PYH4 1435 aa24.28■■□□□ 1.48
TSC22D4-201ENST00000300181 RRP7BPQ9NSQ0 103 aa24.28■■□□□ 1.48
TSC22D4-201ENST00000300181 PLEKHD1A6NEE1 506 aa24.27■■□□□ 1.48
TSC22D4-201ENST00000300181 ADCY10Q96PN6 1610 aa24.27■■□□□ 1.48
TSC22D4-201ENST00000300181 NAIPQ13075 1403 aa24.26■■□□□ 1.47
TSC22D4-201ENST00000300181 DIEXFQ68CQ4 756 aaKnown RBP24.25■■□□□ 1.47
TSC22D4-201ENST00000300181 SCAF1Q9H7N4 1312 aaKnown RBP24.24■■□□□ 1.47
TSC22D4-201ENST00000300181 ITSN2Q9NZM3 1697 aa24.22■■□□□ 1.47
TSC22D4-201ENST00000300181 UACAQ9BZF9 1416 aa24.22■■□□□ 1.47
TSC22D4-201ENST00000300181 CFDP1Q9UEE9 299 aaPredicted RBP24.21■■□□□ 1.47
TSC22D4-201ENST00000300181 ZNF777Q9ULD5 760 aaPredicted RBP24.21■■□□□ 1.47
TSC22D4-201ENST00000300181 GPATCH8Q9UKJ3 1502 aaKnown RBP24.21■■□□□ 1.47
TSC22D4-201ENST00000300181 CDC42BPAQ5VT25 1732 aa24.18■■□□□ 1.46
TSC22D4-201ENST00000300181 DAPK1P53355 1430 aa24.18■■□□□ 1.46
TSC22D4-201ENST00000300181 GCC2Q8IWJ2 1684 aa24.17■■□□□ 1.46
TSC22D4-201ENST00000300181 DNMT1P26358 1616 aaKnown RBP24.17■■□□□ 1.46
TSC22D4-201ENST00000300181 CAMSAP2Q08AD1 1489 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms