RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
CLPX-201ENST00000300107 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
CLPX-201ENST00000300107 EEA1Q15075 1411 aa17.01■□□□□ 0.31
CLPX-201ENST00000300107 MTUS2Q5JR59 1369 aa17.01■□□□□ 0.31
CLPX-201ENST00000300107 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
CLPX-201ENST00000300107 PPP4R2Q9NY27 417 aa16.98■□□□□ 0.31
CLPX-201ENST00000300107 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
CLPX-201ENST00000300107 BECN1Q14457 450 aa16.97■□□□□ 0.31
CLPX-201ENST00000300107 GOLGA3Q08378 1498 aa16.96■□□□□ 0.31
CLPX-201ENST00000300107 TSPY4P0CV99 314 aa16.94■□□□□ 0.3
CLPX-201ENST00000300107 TSPY10P0CW01 314 aa16.94■□□□□ 0.3
CLPX-201ENST00000300107 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
CLPX-201ENST00000300107 RRP7BPQ9NSQ0 103 aa16.91■□□□□ 0.3
CLPX-201ENST00000300107 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
CLPX-201ENST00000300107 NOP58Q9Y2X3 529 aaKnown RBP16.91■□□□□ 0.3
CLPX-201ENST00000300107 TRIM44Q96DX7 344 aaPredicted RBP16.9■□□□□ 0.3
CLPX-201ENST00000300107 ERICH6BQ5W0A0 696 aa16.9■□□□□ 0.3
CLPX-201ENST00000300107 KCNH8Q96L42 1107 aa16.89■□□□□ 0.29
CLPX-201ENST00000300107 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
CLPX-201ENST00000300107 RBM19Q9Y4C8 960 aaKnown RBP16.85■□□□□ 0.29
CLPX-201ENST00000300107 SENP3-EIF4A1A0A087X0R7 540 aa16.84■□□□□ 0.29
CLPX-201ENST00000300107 LAS1LQ9Y4W2 734 aaKnown RBP16.84■□□□□ 0.29
CLPX-201ENST00000300107 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
CLPX-201ENST00000300107 B4GALNT3Q6L9W6 998 aa16.82■□□□□ 0.28
CLPX-201ENST00000300107 RTN4Q9NQC3 1192 aaKnown RBP16.82■□□□□ 0.28
CLPX-201ENST00000300107 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
CLPX-201ENST00000300107 GOLGA6L22H0YM25 854 aa16.81■□□□□ 0.28
CLPX-201ENST00000300107 MYH16Q9H6N6 1097 aa16.81■□□□□ 0.28
CLPX-201ENST00000300107 CCER2I3L3R5 266 aa16.78■□□□□ 0.28
CLPX-201ENST00000300107 DEKP35659 375 aaKnown RBP16.77■□□□□ 0.28
CLPX-201ENST00000300107 CEP164Q9UPV0 1460 aa16.76■□□□□ 0.27
CLPX-201ENST00000300107 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.278e-8■■■■■ 37.6
CLPX-201ENST00000300107 PLEKHD1A6NEE1 506 aa16.75■□□□□ 0.27
CLPX-201ENST00000300107 TIMELESSQ9UNS1 1208 aa16.75■□□□□ 0.27
CLPX-201ENST00000300107 NCLP19338 710 aaKnown RBP16.72■□□□□ 0.27
CLPX-201ENST00000300107 RGS3P49796 1198 aa16.72■□□□□ 0.27
CLPX-201ENST00000300107 CARD11Q9BXL7 1154 aa16.72■□□□□ 0.27
CLPX-201ENST00000300107 RGL3Q3MIN7 710 aa16.71■□□□□ 0.27
CLPX-201ENST00000300107 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
CLPX-201ENST00000300107 PLEKHG5O94827 1062 aa16.7■□□□□ 0.26
CLPX-201ENST00000300107 TSHZ2Q9NRE2 1034 aa16.7■□□□□ 0.26
CLPX-201ENST00000300107 NAP1L5Q96NT1 182 aaPredicted RBP16.7■□□□□ 0.26
CLPX-201ENST00000300107 KNSTRNQ9Y448 316 aa16.7■□□□□ 0.26
CLPX-201ENST00000300107 CCNB3Q8WWL7 1395 aa16.69■□□□□ 0.26
CLPX-201ENST00000300107 CDCA8Q53HL2 280 aa16.68■□□□□ 0.26
CLPX-201ENST00000300107 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
CLPX-201ENST00000300107 PTMAP06454 111 aaKnown RBP16.66■□□□□ 0.26
CLPX-201ENST00000300107 CFDP1Q9UEE9 299 aaPredicted RBP16.65■□□□□ 0.26
CLPX-201ENST00000300107 CFAP53Q96M91 514 aa16.64■□□□□ 0.26
CLPX-201ENST00000300107 FTSJ3Q8IY81 847 aaKnown RBP16.63■□□□□ 0.25
CLPX-201ENST00000300107 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
CLPX-201ENST00000300107 CECR2Q9BXF3 1484 aa16.62■□□□□ 0.25
CLPX-201ENST00000300107 NACADO15069 1562 aa16.61■□□□□ 0.25
CLPX-201ENST00000300107 DNTTIP2Q5QJE6 756 aaKnown RBP16.61■□□□□ 0.25
CLPX-201ENST00000300107 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
CLPX-201ENST00000300107 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
CLPX-201ENST00000300107 FRAT1Q92837 279 aaPredicted RBP16.58■□□□□ 0.24
CLPX-201ENST00000300107 ARID4BQ4LE39 1312 aaPredicted RBP16.56■□□□□ 0.24
CLPX-201ENST00000300107 L1TD1Q5T7N2 865 aaKnown RBP16.55■□□□□ 0.24
CLPX-201ENST00000300107 A0A0G2JS52 829 aa16.55■□□□□ 0.24
CLPX-201ENST00000300107 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
CLPX-201ENST00000300107 CASC1Q6TDU7 716 aa16.55■□□□□ 0.24
CLPX-201ENST00000300107 C14orf37Q86TY3 774 aa16.55■□□□□ 0.24
CLPX-201ENST00000300107 HSPA5P11021 654 aaKnown RBP16.53■□□□□ 0.24
CLPX-201ENST00000300107 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
CLPX-201ENST00000300107 CC2D1BQ5T0F9 858 aaKnown RBP16.53■□□□□ 0.24
CLPX-201ENST00000300107 SOGA1O94964 1423 aa16.53■□□□□ 0.24
CLPX-201ENST00000300107 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
CLPX-201ENST00000300107 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
CLPX-201ENST00000300107 HSP90AB1P08238 724 aaKnown RBP16.51■□□□□ 0.23
CLPX-201ENST00000300107 MS4A1P11836 297 aa16.51■□□□□ 0.23
CLPX-201ENST00000300107 TCERG1O14776 1098 aaKnown RBP16.5■□□□□ 0.23
CLPX-201ENST00000300107 FHAD1B1AJZ9 1412 aa16.49■□□□□ 0.23
CLPX-201ENST00000300107 NUDCQ9Y266 331 aa16.49■□□□□ 0.23
CLPX-201ENST00000300107 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
CLPX-201ENST00000300107 CHMP4BQ9H444 224 aaKnown RBP16.48■□□□□ 0.23
CLPX-201ENST00000300107 HSCBQ8IWL3 235 aa16.47■□□□□ 0.23
CLPX-201ENST00000300107 ZRSR1Q15695 479 aaKnown RBP16.46■□□□□ 0.23
CLPX-201ENST00000300107 IPO9Q96P70 1041 aaKnown RBP16.46■□□□□ 0.23
CLPX-201ENST00000300107 KANK4Q5T7N3 995 aaPredicted RBP16.45■□□□□ 0.22
CLPX-201ENST00000300107 BAZ1AQ9NRL2 1556 aaPredicted RBP16.45■□□□□ 0.22
CLPX-201ENST00000300107 PLCB2Q00722 1185 aa16.45■□□□□ 0.22
CLPX-201ENST00000300107 RCAN3Q9UKA8 241 aa16.45■□□□□ 0.22
CLPX-201ENST00000300107 TMF1P82094 1093 aa16.44■□□□□ 0.22
CLPX-201ENST00000300107 TPRNQ4KMQ1 711 aa16.44■□□□□ 0.22
CLPX-201ENST00000300107 DCAF11Q8TEB1 546 aa16.43■□□□□ 0.22
CLPX-201ENST00000300107 CARMIL1Q5VZK9 1371 aa16.43■□□□□ 0.22
CLPX-201ENST00000300107 RAB3GAP2Q9H2M9 1393 aa16.42■□□□□ 0.22
CLPX-201ENST00000300107 CUX2O14529 1486 aa16.41■□□□□ 0.22
CLPX-201ENST00000300107 MSNP26038 577 aaKnown RBP16.41■□□□□ 0.22
CLPX-201ENST00000300107 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.21
CLPX-201ENST00000300107 SPRYD3Q8NCJ5 442 aa16.38■□□□□ 0.21
CLPX-201ENST00000300107 U2SURPO15042 1029 aaKnown RBP16.36■□□□□ 0.21
CLPX-201ENST00000300107 MLECQ14165 292 aa16.36■□□□□ 0.21
CLPX-201ENST00000300107 CDK11BP21127 795 aaKnown RBP16.36■□□□□ 0.21
CLPX-201ENST00000300107 SLKQ9H2G2 1235 aaPredicted RBP16.36■□□□□ 0.21
CLPX-201ENST00000300107 KTN1Q86UP2 1357 aaKnown RBP16.35■□□□□ 0.21
CLPX-201ENST00000300107 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.35■□□□□ 0.21
CLPX-201ENST00000300107 RALBP1Q15311 655 aa16.34■□□□□ 0.21
CLPX-201ENST00000300107 LMOD2Q6P5Q4 547 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms