RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CTTNBP2Q8WZ74 1663 aa33.18■■■□□ 2.9
SOX17-201ENST00000297316 EIF4G3O43432 1585 aaKnown RBP33.17■■■□□ 2.9
SOX17-201ENST00000297316 ADAMTS12P58397 1594 aa33.13■■■□□ 2.89
SOX17-201ENST00000297316 FHAD1B1AJZ9 1412 aa33.1■■■□□ 2.89
SOX17-201ENST00000297316 P3H3Q8IVL6 736 aa33.05■■■□□ 2.88
SOX17-201ENST00000297316 SNAPC4Q5SXM2 1469 aa33.03■■■□□ 2.88
SOX17-201ENST00000297316 APLP2Q06481 763 aa32.98■■■□□ 2.87
SOX17-201ENST00000297316 FHOD3Q2V2M9 1422 aa32.93■■■□□ 2.86
SOX17-201ENST00000297316 EFCAB5A4FU69 1503 aa32.89■■■□□ 2.86
SOX17-201ENST00000297316 MAGI1Q96QZ7 1491 aaPredicted RBP32.84■■■□□ 2.85
SOX17-201ENST00000297316 KANK4Q5T7N3 995 aaPredicted RBP32.83■■■□□ 2.85
SOX17-201ENST00000297316 GRIN2AQ12879 1464 aa32.82■■■□□ 2.84
SOX17-201ENST00000297316 SAMD9Q5K651 1589 aa32.82■■■□□ 2.84
SOX17-201ENST00000297316 IQGAP2Q13576 1575 aa32.8■■■□□ 2.84
SOX17-201ENST00000297316 PCF11O94913 1555 aaKnown RBP32.78■■■□□ 2.84
SOX17-201ENST00000297316 FBLN2P98095 1184 aa32.77■■■□□ 2.84
SOX17-201ENST00000297316 SYNJ2O15056 1496 aa32.76■■■□□ 2.83
SOX17-201ENST00000297316 CHMP7Q8WUX9 453 aaPredicted RBP32.76■■■□□ 2.83
SOX17-201ENST00000297316 ATP1B4Q9UN42 357 aaPredicted RBP32.7■■■□□ 2.83
SOX17-201ENST00000297316 CEP170Q5SW79 1584 aa32.66■■■□□ 2.82
SOX17-201ENST00000297316 TIAM1Q13009 1591 aa32.66■■■□□ 2.82
SOX17-201ENST00000297316 KIAA0586Q9BVV6 1533 aa32.66■■■□□ 2.82
SOX17-201ENST00000297316 FMN1Q68DA7 1419 aa32.62■■■□□ 2.81
SOX17-201ENST00000297316 CASKIN1Q8WXD9 1431 aa32.61■■■□□ 2.81
SOX17-201ENST00000297316 FYCO1Q9BQS8 1478 aa32.6■■■□□ 2.81
SOX17-201ENST00000297316 UGGT2Q9NYU1 1516 aa32.59■■■□□ 2.81
SOX17-201ENST00000297316 MAP3K1Q13233 1512 aa32.56■■■□□ 2.8
SOX17-201ENST00000297316 CFAP43Q8NDM7 1665 aa32.56■■■□□ 2.8
SOX17-201ENST00000297316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.53■■■□□ 2.8
SOX17-201ENST00000297316 NUP160Q12769 1436 aa32.53■■■□□ 2.8
SOX17-201ENST00000297316 LRRIQ1Q96JM4 1722 aa32.52■■■□□ 2.8
SOX17-201ENST00000297316 ZEB1P37275 1124 aaPredicted RBP32.51■■■□□ 2.79
SOX17-201ENST00000297316 DISP1Q96F81 1524 aa32.51■■■□□ 2.79
SOX17-201ENST00000297316 LRRC9Q6ZRR7 1453 aa32.5■■■□□ 2.79
SOX17-201ENST00000297316 KIAA0556O60303 1618 aa32.48■■■□□ 2.79
SOX17-201ENST00000297316 CHD1O14646 1710 aa32.47■■■□□ 2.79
SOX17-201ENST00000297316 HNRNPUL2Q1KMD3 747 aaKnown RBP32.43■■■□□ 2.78
SOX17-201ENST00000297316 JPH4Q96JJ6 628 aa32.38■■■□□ 2.77
SOX17-201ENST00000297316 CCER1Q8TC90 406 aaPredicted RBP32.35■■■□□ 2.77
SOX17-201ENST00000297316 RRBP1Q9P2E9 1410 aaKnown RBP32.32■■■□□ 2.77
SOX17-201ENST00000297316 PHLDB1Q86UU1 1377 aa32.31■■■□□ 2.76
SOX17-201ENST00000297316 ARID3CA6NKF2 412 aa32.29■■■□□ 2.76
SOX17-201ENST00000297316 HECW1Q76N89 1606 aa32.29■■■□□ 2.76
SOX17-201ENST00000297316 CCNB3Q8WWL7 1395 aa32.24■■■□□ 2.75
SOX17-201ENST00000297316 MTUS2Q5JR59 1369 aa32.24■■■□□ 2.75
SOX17-201ENST00000297316 CDK13Q14004 1512 aaKnown RBP32.24■■■□□ 2.75
SOX17-201ENST00000297316 EPRSP07814 1512 aaKnown RBP32.23■■■□□ 2.75
SOX17-201ENST00000297316 CARMIL2Q6F5E8 1435 aa32.22■■■□□ 2.75
SOX17-201ENST00000297316 MAGI3Q5TCQ9 1506 aa32.21■■■□□ 2.75
SOX17-201ENST00000297316 CCDC18Q5T9S5 1454 aa32.2■■■□□ 2.74
SOX17-201ENST00000297316 RAPGEF6Q8TEU7 1601 aa32.18■■■□□ 2.74
SOX17-201ENST00000297316 PLB1Q6P1J6 1458 aa32.15■■■□□ 2.74
SOX17-201ENST00000297316 NUP153P49790 1475 aaKnown RBP32.15■■■□□ 2.74
SOX17-201ENST00000297316 PRG4Q92954 1404 aaPredicted RBP32.15■■■□□ 2.74
SOX17-201ENST00000297316 ITGAEP38570 1179 aa32.12■■■□□ 2.73
SOX17-201ENST00000297316 EHBP1L1Q8N3D4 1523 aa32.11■■■□□ 2.73
SOX17-201ENST00000297316 NCOA2Q15596 1464 aa32.08■■■□□ 2.73
SOX17-201ENST00000297316 SUPT6HQ7KZ85 1726 aaKnown RBP32.08■■■□□ 2.73
SOX17-201ENST00000297316 FAM50AQ14320 339 aaKnown RBP32.06■■■□□ 2.72
SOX17-201ENST00000297316 SHROOM2Q13796 1616 aa32.06■■■□□ 2.72
SOX17-201ENST00000297316 ERCC6L2Q5T890 1561 aa32.02■■■□□ 2.72
SOX17-201ENST00000297316 CLASP1Q7Z460 1538 aa31.98■■■□□ 2.71
SOX17-201ENST00000297316 FGD6Q6ZV73 1430 aa31.98■■■□□ 2.71
SOX17-201ENST00000297316 ABCA8O94911 1581 aa31.97■■■□□ 2.71
SOX17-201ENST00000297316 ARHGEF11O15085 1522 aa31.97■■■□□ 2.71
SOX17-201ENST00000297316 PTPRGP23470 1445 aa31.94■■■□□ 2.7
SOX17-201ENST00000297316 MYOM3Q5VTT5 1437 aa31.94■■■□□ 2.7
SOX17-201ENST00000297316 CDK11AQ9UQ88 783 aaPredicted RBP31.83■■■□□ 2.69
SOX17-201ENST00000297316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.82■■■□□ 2.68
SOX17-201ENST00000297316 ATP10BO94823 1461 aa31.82■■■□□ 2.68
SOX17-201ENST00000297316 PTPN23Q9H3S7 1636 aa31.81■■■□□ 2.68
SOX17-201ENST00000297316 TROQ12816 1431 aaPredicted RBP31.79■■■□□ 2.68
SOX17-201ENST00000297316 KIF14Q15058 1648 aa31.76■■■□□ 2.67
SOX17-201ENST00000297316 UACAQ9BZF9 1416 aa31.75■■■□□ 2.67
SOX17-201ENST00000297316 PTPRKQ15262 1439 aa31.74■■■□□ 2.67
SOX17-201ENST00000297316 DHX57Q6P158 1386 aaKnown RBP31.73■■■□□ 2.67
SOX17-201ENST00000297316 RAB3GAP2Q9H2M9 1393 aa31.72■■■□□ 2.67
SOX17-201ENST00000297316 TCOF1Q13428 1488 aaKnown RBP31.68■■■□□ 2.66
SOX17-201ENST00000297316 SETD5Q9C0A6 1442 aa31.68■■■□□ 2.66
SOX17-201ENST00000297316 ADCY10Q96PN6 1610 aa31.68■■■□□ 2.66
SOX17-201ENST00000297316 PLEKHD1A6NEE1 506 aa31.67■■■□□ 2.66
SOX17-201ENST00000297316 MIA2Q96PC5 1412 aa31.66■■■□□ 2.66
SOX17-201ENST00000297316 ABCC2Q92887 1545 aa31.63■■■□□ 2.65
SOX17-201ENST00000297316 ZNF644Q9H582 1327 aaPredicted RBP31.61■■■□□ 2.65
SOX17-201ENST00000297316 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
SOX17-201ENST00000297316 GPATCH8Q9UKJ3 1502 aaKnown RBP31.58■■■□□ 2.65
SOX17-201ENST00000297316 CHIC2Q9UKJ5 165 aa31.55■■■□□ 2.64
SOX17-201ENST00000297316 ITSN2Q9NZM3 1697 aa31.54■■■□□ 2.64
SOX17-201ENST00000297316 ABCC10Q5T3U5 1492 aa31.53■■■□□ 2.64
SOX17-201ENST00000297316 CDC42BPAQ5VT25 1732 aa31.53■■■□□ 2.64
SOX17-201ENST00000297316 CFDP1Q9UEE9 299 aaPredicted RBP31.52■■■□□ 2.64
SOX17-201ENST00000297316 CLSPNQ9HAW4 1339 aa31.5■■■□□ 2.63
SOX17-201ENST00000297316 HFM1A2PYH4 1435 aa31.49■■■□□ 2.63
SOX17-201ENST00000297316 ZNF777Q9ULD5 760 aaPredicted RBP31.48■■■□□ 2.63
SOX17-201ENST00000297316 ZCCHC11Q5TAX3 1644 aaKnown RBP31.48■■■□□ 2.63
SOX17-201ENST00000297316 RRP7BPQ9NSQ0 103 aa31.47■■■□□ 2.63
SOX17-201ENST00000297316 NAIPQ13075 1403 aa31.47■■■□□ 2.63
SOX17-201ENST00000297316 UHRF1BP1LA0JNW5 1464 aa31.46■■■□□ 2.63
SOX17-201ENST00000297316 CAMSAP2Q08AD1 1489 aa31.46■■■□□ 2.63
SOX17-201ENST00000297316 DAPK1P53355 1430 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms