RNA–Protein interactions for RNA: ENST00000296292.7

RFT1-201, Transcript of RFT1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFT1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1-201ENST00000296292 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
RFT1-201ENST00000296292 SOGA1O94964 1423 aa12.26□□□□□ -0.45
RFT1-201ENST00000296292 CUX2O14529 1486 aa12.26□□□□□ -0.45
RFT1-201ENST00000296292 CARMIL1Q5VZK9 1371 aa12.26□□□□□ -0.45
RFT1-201ENST00000296292 TNIKQ9UKE5 1360 aa12.26□□□□□ -0.45
RFT1-201ENST00000296292 HNRNPUQ00839 825 aaKnown RBP eCLIP12.26□□□□□ -0.45
RFT1-201ENST00000296292 CEP164Q9UPV0 1460 aa12.24□□□□□ -0.45
RFT1-201ENST00000296292 PPP1R15AO75807 674 aaPredicted RBP12.24□□□□□ -0.45
RFT1-201ENST00000296292 TDRD9Q8NDG6 1382 aaKnown RBP12.23□□□□□ -0.45
RFT1-201ENST00000296292 TMC1Q8TDI8 760 aa12.23□□□□□ -0.45
RFT1-201ENST00000296292 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
RFT1-201ENST00000296292 CCDC88BA6NC98 1476 aa12.22□□□□□ -0.45
RFT1-201ENST00000296292 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
RFT1-201ENST00000296292 EIF4G2P78344 907 aaKnown RBP eCLIP12.19□□□□□ -0.46
RFT1-201ENST00000296292 MRS2Q9HD23 443 aa12.18□□□□□ -0.46
RFT1-201ENST00000296292 C14orf37Q86TY3 774 aa12.17□□□□□ -0.46
RFT1-201ENST00000296292 ACIN1Q9UKV3 1341 aaKnown RBP12.17□□□□□ -0.46
RFT1-201ENST00000296292 EIF4G1Q04637 1599 aaKnown RBP12.17□□□□□ -0.46
RFT1-201ENST00000296292 RTL5Q5HYW3 569 aaPredicted RBP12.16□□□□□ -0.46
RFT1-201ENST00000296292 SIN3AQ96ST3 1273 aa12.16□□□□□ -0.46
RFT1-201ENST00000296292 PDS5BQ9NTI5 1447 aa12.16□□□□□ -0.46
RFT1-201ENST00000296292 ABCC8Q09428 1581 aa12.15□□□□□ -0.47
RFT1-201ENST00000296292 ZBTB7CA1YPR0 619 aa12.15□□□□□ -0.47
RFT1-201ENST00000296292 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
RFT1-201ENST00000296292 MLECQ14165 292 aa12.14□□□□□ -0.47
RFT1-201ENST00000296292 FKBP8Q14318 412 aa12.14□□□□□ -0.47
RFT1-201ENST00000296292 WDR43Q15061 677 aaKnown RBP eCLIP12.13□□□□□ -0.47
RFT1-201ENST00000296292 MIER1Q8N108 512 aa12.13□□□□□ -0.47
RFT1-201ENST00000296292 A0A0G2JS52 829 aa12.12□□□□□ -0.47
RFT1-201ENST00000296292 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
RFT1-201ENST00000296292 SMARCA2P51531 1590 aa12.11□□□□□ -0.47
RFT1-201ENST00000296292 MYT1Q01538 1121 aa12.11□□□□□ -0.47
RFT1-201ENST00000296292 CADPSQ9ULU8 1353 aa12.1□□□□□ -0.47
RFT1-201ENST00000296292 KANK4Q5T7N3 995 aaPredicted RBP12.09□□□□□ -0.47
RFT1-201ENST00000296292 CARD11Q9BXL7 1154 aa12.09□□□□□ -0.47
RFT1-201ENST00000296292 FHAD1B1AJZ9 1412 aa12.08□□□□□ -0.48
RFT1-201ENST00000296292 GGT6Q6P531 493 aa12.07□□□□□ -0.48
RFT1-201ENST00000296292 NPM2Q86SE8 214 aaKnown RBP12.07□□□□□ -0.48
RFT1-201ENST00000296292 PPM1GO15355 546 aaPredicted RBP12.06□□□□□ -0.48
RFT1-201ENST00000296292 WIZO95785 1651 aa12.06□□□□□ -0.48
RFT1-201ENST00000296292 CC2D2AQ9P2K1 1620 aa12.05□□□□□ -0.48
RFT1-201ENST00000296292 ATAD2BQ9ULI0 1458 aa12.04□□□□□ -0.48
RFT1-201ENST00000296292 LMOD2Q6P5Q4 547 aa12.03□□□□□ -0.48
RFT1-201ENST00000296292 POGKQ9P215 609 aa12.03□□□□□ -0.48
RFT1-201ENST00000296292 IRX6P78412 446 aaPredicted RBP12.03□□□□□ -0.48
RFT1-201ENST00000296292 DCAF11Q8TEB1 546 aa12.02□□□□□ -0.48
RFT1-201ENST00000296292 FOXD1Q16676 465 aa12.01□□□□□ -0.49
RFT1-201ENST00000296292 CARMIL2Q6F5E8 1435 aa12.01□□□□□ -0.49
RFT1-201ENST00000296292 HAP1P54257 671 aaPredicted RBP12.01□□□□□ -0.49
RFT1-201ENST00000296292 KNSTRNQ9Y448 316 aa12.01□□□□□ -0.49
RFT1-201ENST00000296292 JPH4Q96JJ6 628 aa12□□□□□ -0.49
RFT1-201ENST00000296292 TNNT2P45379 298 aaPredicted RBP11.99□□□□□ -0.49
RFT1-201ENST00000296292 CCDC136Q96JN2 1154 aa11.99□□□□□ -0.49
RFT1-201ENST00000296292 SAFB2Q14151 953 aaKnown RBP eCLIP11.98□□□□□ -0.49
RFT1-201ENST00000296292 CDCA8Q53HL2 280 aa11.98□□□□□ -0.49
RFT1-201ENST00000296292 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
RFT1-201ENST00000296292 VPS8Q8N3P4 1428 aa11.97□□□□□ -0.49
RFT1-201ENST00000296292 EFCAB2Q5VUJ9 269 aa11.97□□□□□ -0.49
RFT1-201ENST00000296292 TOP2AP11388 1531 aaKnown RBP11.97□□□□□ -0.49
RFT1-201ENST00000296292 PKD2Q13563 968 aa11.97□□□□□ -0.49
RFT1-201ENST00000296292 ANP32AP39687 249 aaKnown RBP11.96□□□□□ -0.5
RFT1-201ENST00000296292 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.96□□□□□ -0.5
RFT1-201ENST00000296292 HNRNPMP52272 730 aaKnown RBP eCLIP11.94□□□□□ -0.5
RFT1-201ENST00000296292 CFAP53Q96M91 514 aa11.93□□□□□ -0.5
RFT1-201ENST00000296292 FHOD3Q2V2M9 1422 aa11.93□□□□□ -0.5
RFT1-201ENST00000296292 KANK1Q14678 1352 aa11.92□□□□□ -0.5
RFT1-201ENST00000296292 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
RFT1-201ENST00000296292 SOX12O15370 315 aa11.92□□□□□ -0.5
RFT1-201ENST00000296292 CC2D1BQ5T0F9 858 aaKnown RBP11.92□□□□□ -0.5
RFT1-201ENST00000296292 STK26Q9P289 416 aa11.92□□□□□ -0.5
RFT1-201ENST00000296292 KIF3BO15066 747 aa11.91□□□□□ -0.5
RFT1-201ENST00000296292 HSP90AA1P07900 732 aaKnown RBP11.91□□□□□ -0.5
RFT1-201ENST00000296292 FMN1Q68DA7 1419 aa11.91□□□□□ -0.5
RFT1-201ENST00000296292 ARXQ96QS3 562 aa11.9□□□□□ -0.5
RFT1-201ENST00000296292 FANCD2Q9BXW9 1451 aa11.9□□□□□ -0.5
RFT1-201ENST00000296292 ARHGAP35Q9NRY4 1499 aa11.9□□□□□ -0.5
RFT1-201ENST00000296292 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
RFT1-201ENST00000296292 RUSC2Q8N2Y8 1516 aa11.89□□□□□ -0.51
RFT1-201ENST00000296292 BICRAQ9NZM4 1560 aa11.89□□□□□ -0.51
RFT1-201ENST00000296292 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
RFT1-201ENST00000296292 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
RFT1-201ENST00000296292 SRPK2P78362 688 aaKnown RBP11.89□□□□□ -0.51
RFT1-201ENST00000296292 NUP155O75694 1391 aa11.89□□□□□ -0.51
RFT1-201ENST00000296292 UPF2Q9HAU5 1272 aaKnown RBP11.88□□□□□ -0.51
RFT1-201ENST00000296292 SETD5Q9C0A6 1442 aa11.88□□□□□ -0.51
RFT1-201ENST00000296292 LAS1LQ9Y4W2 734 aaKnown RBP11.88□□□□□ -0.51
RFT1-201ENST00000296292 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
RFT1-201ENST00000296292 MPHOSPH9Q99550 1183 aa11.87□□□□□ -0.51
RFT1-201ENST00000296292 U2SURPO15042 1029 aaKnown RBP11.87□□□□□ -0.51
RFT1-201ENST00000296292 TMF1P82094 1093 aa11.86□□□□□ -0.51
RFT1-201ENST00000296292 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
RFT1-201ENST00000296292 NUDCQ9Y266 331 aa11.84□□□□□ -0.51
RFT1-201ENST00000296292 NUTM2DQ5VT03 806 aaPredicted RBP11.84□□□□□ -0.51
RFT1-201ENST00000296292 SPAG9O60271 1321 aaKnown RBP11.84□□□□□ -0.51
RFT1-201ENST00000296292 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
RFT1-201ENST00000296292 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
RFT1-201ENST00000296292 MYH16Q9H6N6 1097 aa11.83□□□□□ -0.52
RFT1-201ENST00000296292 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
RFT1-201ENST00000296292 ANKRD30AQ9BXX3 1397 aa11.82□□□□□ -0.52
RFT1-201ENST00000296292 SUPT16HQ9Y5B9 1047 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms