RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 RUSC2Q8N2Y8 1516 aa18.68■□□□□ 0.58
RFC4-201ENST00000296273 KIF13AQ9H1H9 1805 aa18.68■□□□□ 0.58
RFC4-201ENST00000296273 NPM1P06748 294 aaKnown RBP eCLIP18.66■□□□□ 0.58
RFC4-201ENST00000296273 ABCC10Q5T3U5 1492 aa18.63■□□□□ 0.57
RFC4-201ENST00000296273 MAPKBP1O60336 1514 aa18.62■□□□□ 0.57
RFC4-201ENST00000296273 FAM69CQ0P6D2 419 aa18.6■□□□□ 0.57
RFC4-201ENST00000296273 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
RFC4-201ENST00000296273 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
RFC4-201ENST00000296273 CUL7Q14999 1698 aa18.56■□□□□ 0.56
RFC4-201ENST00000296273 IGF1RP08069 1367 aa18.56■□□□□ 0.56
RFC4-201ENST00000296273 ADCY10Q96PN6 1610 aa18.55■□□□□ 0.56
RFC4-201ENST00000296273 DIP2BQ9P265 1576 aa18.55■□□□□ 0.56
RFC4-201ENST00000296273 KDM6BO15054 1643 aa18.46■□□□□ 0.55
RFC4-201ENST00000296273 PTPRGP23470 1445 aa18.45■□□□□ 0.54
RFC4-201ENST00000296273 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
RFC4-201ENST00000296273 CARMIL2Q6F5E8 1435 aa18.44■□□□□ 0.54
RFC4-201ENST00000296273 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
RFC4-201ENST00000296273 ABCC2Q92887 1545 aa18.39■□□□□ 0.53
RFC4-201ENST00000296273 IQGAP2Q13576 1575 aa18.38■□□□□ 0.53
RFC4-201ENST00000296273 TSPOAP1O95153 1857 aa18.37■□□□□ 0.53
RFC4-201ENST00000296273 PLB1Q6P1J6 1458 aa18.36■□□□□ 0.53
RFC4-201ENST00000296273 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
RFC4-201ENST00000296273 TTBK1Q5TCY1 1321 aaPredicted RBP18.34■□□□□ 0.53
RFC4-201ENST00000296273 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.53
RFC4-201ENST00000296273 GLI2P10070 1586 aa18.33■□□□□ 0.53
RFC4-201ENST00000296273 ASXL2Q76L83 1435 aa18.33■□□□□ 0.52
RFC4-201ENST00000296273 UACAQ9BZF9 1416 aa18.31■□□□□ 0.52
RFC4-201ENST00000296273 DISP1Q96F81 1524 aa18.28■□□□□ 0.52
RFC4-201ENST00000296273 RAPGEF2Q9Y4G8 1499 aa18.26■□□□□ 0.51
RFC4-201ENST00000296273 UGGT2Q9NYU1 1516 aa18.26■□□□□ 0.51
RFC4-201ENST00000296273 KDM5BQ9UGL1 1544 aa18.26■□□□□ 0.51
RFC4-201ENST00000296273 PPRC1Q5VV67 1664 aaKnown RBP18.25■□□□□ 0.51
RFC4-201ENST00000296273 EPRSP07814 1512 aaKnown RBP18.23■□□□□ 0.51
RFC4-201ENST00000296273 TEX14Q8IWB6 1497 aa18.21■□□□□ 0.51
RFC4-201ENST00000296273 KIAA0556O60303 1618 aa18.2■□□□□ 0.5
RFC4-201ENST00000296273 MAP3K4Q9Y6R4 1608 aa18.2■□□□□ 0.5
RFC4-201ENST00000296273 ZCCHC11Q5TAX3 1644 aaKnown RBP18.18■□□□□ 0.5
RFC4-201ENST00000296273 ADGRL1O94910 1474 aa18.15■□□□□ 0.5
RFC4-201ENST00000296273 COL17A1Q9UMD9 1497 aaPredicted RBP18.15■□□□□ 0.5
RFC4-201ENST00000296273 WDR7Q9Y4E6 1490 aa18.14■□□□□ 0.49
RFC4-201ENST00000296273 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
RFC4-201ENST00000296273 CTTNBP2Q8WZ74 1663 aa18.1■□□□□ 0.49
RFC4-201ENST00000296273 MAGI3Q5TCQ9 1506 aa18.06■□□□□ 0.48
RFC4-201ENST00000296273 CFAP43Q8NDM7 1665 aa18.05■□□□□ 0.48
RFC4-201ENST00000296273 ABCA8O94911 1581 aa18.05■□□□□ 0.48
RFC4-201ENST00000296273 CD109Q6YHK3 1445 aa18.05■□□□□ 0.48
RFC4-201ENST00000296273 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.47
RFC4-201ENST00000296273 PRXQ9BXM0 1461 aa18.01■□□□□ 0.47
RFC4-201ENST00000296273 KCNH8Q96L42 1107 aa18■□□□□ 0.47
RFC4-201ENST00000296273 ILDR1Q86SU0 546 aaPredicted RBP17.99■□□□□ 0.47
RFC4-201ENST00000296273 HECW2Q9P2P5 1572 aa17.96■□□□□ 0.47
RFC4-201ENST00000296273 ARAP3Q8WWN8 1544 aa17.92■□□□□ 0.46
RFC4-201ENST00000296273 PHLDB1Q86UU1 1377 aa17.91■□□□□ 0.46
RFC4-201ENST00000296273 ATP10BO94823 1461 aa17.9■□□□□ 0.46
RFC4-201ENST00000296273 KIF21BO75037 1637 aa17.86■□□□□ 0.45
RFC4-201ENST00000296273 ABCA9Q8IUA7 1624 aa17.86■□□□□ 0.45
RFC4-201ENST00000296273 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
RFC4-201ENST00000296273 SAMD9Q5K651 1589 aa17.84■□□□□ 0.45
RFC4-201ENST00000296273 ARID3CA6NKF2 412 aa17.83■□□□□ 0.45
RFC4-201ENST00000296273 NEO1Q92859 1461 aa17.83■□□□□ 0.44
RFC4-201ENST00000296273 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
RFC4-201ENST00000296273 RAPGEF6Q8TEU7 1601 aa17.81■□□□□ 0.44
RFC4-201ENST00000296273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.79■□□□□ 0.44
RFC4-201ENST00000296273 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
RFC4-201ENST00000296273 RAPGEF3O95398 923 aa17.76■□□□□ 0.43
RFC4-201ENST00000296273 EEA1Q15075 1411 aa17.75■□□□□ 0.43
RFC4-201ENST00000296273 PTPRMP28827 1452 aa17.75■□□□□ 0.43
RFC4-201ENST00000296273 ADAMTSL3P82987 1691 aa17.75■□□□□ 0.43
RFC4-201ENST00000296273 NUP153P49790 1475 aaKnown RBP17.74■□□□□ 0.43
RFC4-201ENST00000296273 FRMPD1Q5SYB0 1578 aa17.71■□□□□ 0.43
RFC4-201ENST00000296273 PLEKHD1A6NEE1 506 aa17.7■□□□□ 0.42
RFC4-201ENST00000296273 BCORL1Q5H9F3 1711 aa17.7■□□□□ 0.42
RFC4-201ENST00000296273 ARID4BQ4LE39 1312 aaPredicted RBP17.69■□□□□ 0.42
RFC4-201ENST00000296273 FHOD3Q2V2M9 1422 aa17.68■□□□□ 0.42
RFC4-201ENST00000296273 DENND4BO75064 1496 aaPredicted RBP17.67■□□□□ 0.42
RFC4-201ENST00000296273 CFAP74Q9C0B2 1584 aa17.67■□□□□ 0.42
RFC4-201ENST00000296273 FBXO41Q8TF61 875 aa17.66■□□□□ 0.42
RFC4-201ENST00000296273 ARHGEF40Q8TER5 1519 aa17.66■□□□□ 0.42
RFC4-201ENST00000296273 AKNAQ7Z591 1439 aa17.66■□□□□ 0.42
RFC4-201ENST00000296273 EFCAB5A4FU69 1503 aa17.65■□□□□ 0.42
RFC4-201ENST00000296273 MADDQ8WXG6 1647 aa17.65■□□□□ 0.42
RFC4-201ENST00000296273 FANCAO15360 1455 aa17.65■□□□□ 0.42
RFC4-201ENST00000296273 RANGAP1P46060 587 aaPredicted RBP17.64■□□□□ 0.41
RFC4-201ENST00000296273 PCF11O94913 1555 aaKnown RBP17.63■□□□□ 0.41
RFC4-201ENST00000296273 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.63■□□□□ 0.41
RFC4-201ENST00000296273 RICTORQ6R327 1708 aa17.63■□□□□ 0.41
RFC4-201ENST00000296273 POGZQ7Z3K3 1410 aa17.61■□□□□ 0.41
RFC4-201ENST00000296273 LMTK3Q96Q04 1460 aa17.6■□□□□ 0.41
RFC4-201ENST00000296273 ZMYM4Q5VZL5 1548 aa17.6■□□□□ 0.41
RFC4-201ENST00000296273 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
RFC4-201ENST00000296273 RIMS1Q86UR5 1692 aaKnown RBP17.58■□□□□ 0.4
RFC4-201ENST00000296273 TTC37Q6PGP7 1564 aa17.57■□□□□ 0.4
RFC4-201ENST00000296273 ZFYVE16Q7Z3T8 1539 aa17.56■□□□□ 0.4
RFC4-201ENST00000296273 PLCH2O75038 1416 aa17.54■□□□□ 0.4
RFC4-201ENST00000296273 YEATS2Q9ULM3 1422 aa17.53■□□□□ 0.4
RFC4-201ENST00000296273 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
RFC4-201ENST00000296273 CDK13Q14004 1512 aaKnown RBP17.52■□□□□ 0.4
RFC4-201ENST00000296273 SCAPERQ9BY12 1400 aa17.51■□□□□ 0.39
RFC4-201ENST00000296273 HECW1Q76N89 1606 aa17.51■□□□□ 0.39
RFC4-201ENST00000296273 FMN1Q68DA7 1419 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms