RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 TRIM44Q96DX7 344 aaPredicted RBP5.9□□□□□ -1.46
NCOA1-201ENST00000288599 EIF4G2P78344 907 aaKnown RBP eCLIP5.9□□□□□ -1.471e-6■■■□□ 18
NCOA1-201ENST00000288599 CWC22Q9HCG8 908 aaKnown RBP5.9□□□□□ -1.47
NCOA1-201ENST00000288599 TRHP20396 242 aaPredicted RBP5.9□□□□□ -1.47
NCOA1-201ENST00000288599 GTF3C3Q9Y5Q9 886 aa5.89□□□□□ -1.47
NCOA1-201ENST00000288599 SMARCA2P51531 1590 aa5.89□□□□□ -1.47
NCOA1-201ENST00000288599 ACIN1Q9UKV3 1341 aaKnown RBP5.88□□□□□ -1.47
NCOA1-201ENST00000288599 HSP90AA1P07900 732 aaKnown RBP5.88□□□□□ -1.47
NCOA1-201ENST00000288599 NBR1Q14596 966 aa5.88□□□□□ -1.47
NCOA1-201ENST00000288599 SMARCA4P51532 1647 aa5.87□□□□□ -1.47
NCOA1-201ENST00000288599 G3V3G9 751 aa5.87□□□□□ -1.47
NCOA1-201ENST00000288599 CHGAP10645 457 aaKnown RBP5.87□□□□□ -1.47
NCOA1-201ENST00000288599 ARID4BQ4LE39 1312 aaPredicted RBP5.87□□□□□ -1.47
NCOA1-201ENST00000288599 TOP2AP11388 1531 aaKnown RBP5.86□□□□□ -1.47
NCOA1-201ENST00000288599 ZRSR1Q15695 479 aaKnown RBP5.85□□□□□ -1.47
NCOA1-201ENST00000288599 TRIM41Q8WV44 630 aa5.85□□□□□ -1.47
NCOA1-201ENST00000288599 ZNF710Q8N1W2 664 aa5.84□□□□□ -1.47
NCOA1-201ENST00000288599 WDR70Q9NW82 654 aa5.84□□□□□ -1.47
NCOA1-201ENST00000288599 CCDC88BA6NC98 1476 aa5.83□□□□□ -1.48
NCOA1-201ENST00000288599 WRNQ14191 1432 aaPredicted RBP eCLIP5.83□□□□□ -1.48
NCOA1-201ENST00000288599 TRIM52Q96A61 297 aa5.83□□□□□ -1.48
NCOA1-201ENST00000288599 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.83□□□□□ -1.48
NCOA1-201ENST00000288599 ANP32CO43423 234 aa5.83□□□□□ -1.48
NCOA1-201ENST00000288599 CCDC9Q9Y3X0 531 aaKnown RBP5.83□□□□□ -1.48
NCOA1-201ENST00000288599 RRP12Q5JTH9 1297 aaKnown RBP5.82□□□□□ -1.48
NCOA1-201ENST00000288599 CFAP44Q96MT7 982 aa5.82□□□□□ -1.48
NCOA1-201ENST00000288599 FBXO3Q9UK99 471 aa5.82□□□□□ -1.48
NCOA1-201ENST00000288599 DIEXFQ68CQ4 756 aaKnown RBP5.82□□□□□ -1.48
NCOA1-201ENST00000288599 KLHL34Q8N239 644 aa5.82□□□□□ -1.48
NCOA1-201ENST00000288599 ANP32AP39687 249 aaKnown RBP5.82□□□□□ -1.48
NCOA1-201ENST00000288599 NCLP19338 710 aaKnown RBP5.81□□□□□ -1.48
NCOA1-201ENST00000288599 VSIG10Q8N0Z9 540 aa5.81□□□□□ -1.48
NCOA1-201ENST00000288599 PPP1R15AO75807 674 aaPredicted RBP5.81□□□□□ -1.48
NCOA1-201ENST00000288599 LMOD2Q6P5Q4 547 aa5.81□□□□□ -1.48
NCOA1-201ENST00000288599 PPM1FP49593 454 aaPredicted RBP5.8□□□□□ -1.48
NCOA1-201ENST00000288599 ABCC8Q09428 1581 aa5.8□□□□□ -1.48
NCOA1-201ENST00000288599 RUSC2Q8N2Y8 1516 aa5.8□□□□□ -1.48
NCOA1-201ENST00000288599 TPRNQ4KMQ1 711 aa5.8□□□□□ -1.48
NCOA1-201ENST00000288599 ZNF326Q5BKZ1 582 aaKnown RBP5.8□□□□□ -1.48
NCOA1-201ENST00000288599 MEX3CQ5U5Q3 659 aaKnown RBP5.79□□□□□ -1.48
NCOA1-201ENST00000288599 RTN4Q9NQC3 1192 aaKnown RBP5.79□□□□□ -1.48
NCOA1-201ENST00000288599 L1TD1Q5T7N2 865 aaKnown RBP5.78□□□□□ -1.48
NCOA1-201ENST00000288599 NEUROD1Q13562 356 aa5.78□□□□□ -1.48
NCOA1-201ENST00000288599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.78□□□□□ -1.48
NCOA1-201ENST00000288599 CSRNP3Q8WYN3 585 aa5.77□□□□□ -1.49
NCOA1-201ENST00000288599 KIAA2012Q0VF49 1180 aa5.76□□□□□ -1.49
NCOA1-201ENST00000288599 CTDP1Q9Y5B0 961 aaPredicted RBP5.76□□□□□ -1.49
NCOA1-201ENST00000288599 SOGA1O94964 1423 aa5.76□□□□□ -1.49
NCOA1-201ENST00000288599 SF3B2Q13435 895 aaKnown RBP5.76□□□□□ -1.49
NCOA1-201ENST00000288599 MYH16Q9H6N6 1097 aa5.76□□□□□ -1.49
NCOA1-201ENST00000288599 SYNJ1O43426 1573 aa5.75□□□□□ -1.49
NCOA1-201ENST00000288599 MSH5O43196 834 aa5.75□□□□□ -1.49
NCOA1-201ENST00000288599 MIER1Q8N108 512 aa5.75□□□□□ -1.49
NCOA1-201ENST00000288599 AK7Q96M32 723 aa5.75□□□□□ -1.49
NCOA1-201ENST00000288599 CHAF1AQ13111 956 aaPredicted RBP5.75□□□□□ -1.49
NCOA1-201ENST00000288599 WDHD1O75717 1129 aaPredicted RBP5.74□□□□□ -1.49
NCOA1-201ENST00000288599 PAF1Q8N7H5 531 aa5.74□□□□□ -1.49
NCOA1-201ENST00000288599 UPF2Q9HAU5 1272 aaKnown RBP5.74□□□□□ -1.49
NCOA1-201ENST00000288599 PNNQ9H307 717 aaKnown RBP5.73□□□□□ -1.49
NCOA1-201ENST00000288599 NOC3LQ8WTT2 800 aaKnown RBP5.73□□□□□ -1.49
NCOA1-201ENST00000288599 CEP89Q96ST8 783 aa5.73□□□□□ -1.49
NCOA1-201ENST00000288599 TAOK2Q9UL54 1235 aa5.72□□□□□ -1.49
NCOA1-201ENST00000288599 TNNT2P45379 298 aaPredicted RBP5.72□□□□□ -1.49
NCOA1-201ENST00000288599 ATAD2BQ9ULI0 1458 aa5.72□□□□□ -1.49
NCOA1-201ENST00000288599 CCAR1Q8IX12 1150 aaKnown RBP5.71□□□□□ -1.49
NCOA1-201ENST00000288599 TCEAL9Q9UHQ7 104 aa5.71□□□□□ -1.5
NCOA1-201ENST00000288599 SALL2Q9Y467 1007 aaPredicted RBP5.71□□□□□ -1.5
NCOA1-201ENST00000288599 SPDYE4A6NLX3 237 aa5.7□□□□□ -1.5
NCOA1-201ENST00000288599 BBXQ8WY36 941 aaPredicted RBP5.7□□□□□ -1.5
NCOA1-201ENST00000288599 PDE4CQ08493 712 aa5.7□□□□□ -1.5
NCOA1-201ENST00000288599 ARID3AQ99856 593 aa5.7□□□□□ -1.5
NCOA1-201ENST00000288599 ANO8Q9HCE9 1232 aaPredicted RBP5.7□□□□□ -1.5
NCOA1-201ENST00000288599 KIF21BO75037 1637 aa5.69□□□□□ -1.5
NCOA1-201ENST00000288599 NOP2P46087 812 aaKnown RBP5.69□□□□□ -1.5
NCOA1-201ENST00000288599 NAP1L5Q96NT1 182 aaPredicted RBP5.69□□□□□ -1.5
NCOA1-201ENST00000288599 TNIKQ9UKE5 1360 aa5.69□□□□□ -1.5
NCOA1-201ENST00000288599 STAC3Q96MF2 364 aa5.69□□□□□ -1.5
NCOA1-201ENST00000288599 GOLGA6L6A8MZA4 724 aa5.69□□□□□ -1.5
NCOA1-201ENST00000288599 IPO9Q96P70 1041 aaKnown RBP5.69□□□□□ -1.5
NCOA1-201ENST00000288599 TMEM87AQ8NBN3 555 aa5.68□□□□□ -1.5
NCOA1-201ENST00000288599 DNTTIP2Q5QJE6 756 aaKnown RBP5.68□□□□□ -1.5
NCOA1-201ENST00000288599 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.68□□□□□ -1.5
NCOA1-201ENST00000288599 FAM50AQ14320 339 aaKnown RBP5.68□□□□□ -1.5
NCOA1-201ENST00000288599 VPS53Q5VIR6 699 aa5.68□□□□□ -1.5
NCOA1-201ENST00000288599 SEPT11Q9NVA2 429 aaKnown RBP5.68□□□□□ -1.5
NCOA1-201ENST00000288599 WWC2Q6AWC2 1192 aa5.68□□□□□ -1.5
NCOA1-201ENST00000288599 CEP162Q5TB80 1403 aa5.68□□□□□ -1.5
NCOA1-201ENST00000288599 WWC1Q8IX03 1113 aa5.67□□□□□ -1.5
NCOA1-201ENST00000288599 BIVM-ERCC5R4GMW8 1640 aa5.67□□□□□ -1.5
NCOA1-201ENST00000288599 RFX1P22670 979 aa5.67□□□□□ -1.5
NCOA1-201ENST00000288599 TRIM34Q9BYJ4 488 aa5.67□□□□□ -1.5
NCOA1-201ENST00000288599 FGD1P98174 961 aa5.67□□□□□ -1.5
NCOA1-201ENST00000288599 PRXQ9BXM0 1461 aa5.67□□□□□ -1.5
NCOA1-201ENST00000288599 A0A0U1RQG5 324 aaPredicted RBP5.66□□□□□ -1.5
NCOA1-201ENST00000288599 IL27Q8NEV9 243 aa5.66□□□□□ -1.5
NCOA1-201ENST00000288599 EEA1Q15075 1411 aa5.66□□□□□ -1.5
NCOA1-201ENST00000288599 CCDC97Q96F63 343 aaPredicted RBP5.66□□□□□ -1.5
NCOA1-201ENST00000288599 CHMP7Q8WUX9 453 aaPredicted RBP5.66□□□□□ -1.5
NCOA1-201ENST00000288599 PAXIP1Q6ZW49 1069 aaPredicted RBP5.66□□□□□ -1.5
NCOA1-201ENST00000288599 TOP2BQ02880 1626 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms