RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 USP35Q9P2H5 1018 aa11.01□□□□□ -0.65
CACNA1D-201ENST00000288139 CFAP44Q96MT7 982 aa11.01□□□□□ -0.65
CACNA1D-201ENST00000288139 PTMSP20962 102 aa11□□□□□ -0.65
CACNA1D-201ENST00000288139 CHMP4BQ9H444 224 aaKnown RBP11□□□□□ -0.65
CACNA1D-201ENST00000288139 GOLGA6L22H0YM25 854 aa11□□□□□ -0.65
CACNA1D-201ENST00000288139 NCBP3Q53F19 620 aaKnown RBP10.99□□□□□ -0.65
CACNA1D-201ENST00000288139 UNC13AQ9UPW8 1703 aa10.99□□□□□ -0.65
CACNA1D-201ENST00000288139 HNRNPUQ00839 825 aaKnown RBP eCLIP10.99□□□□□ -0.65
CACNA1D-201ENST00000288139 VPS8Q8N3P4 1428 aa10.98□□□□□ -0.65
CACNA1D-201ENST00000288139 PRM3Q9NNZ6 103 aa10.98□□□□□ -0.65
CACNA1D-201ENST00000288139 KIF27Q86VH2 1401 aa10.97□□□□□ -0.65
CACNA1D-201ENST00000288139 TRIM52Q96A61 297 aa10.97□□□□□ -0.65
CACNA1D-201ENST00000288139 PPP4R2Q9NY27 417 aa10.96□□□□□ -0.65
CACNA1D-201ENST00000288139 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
CACNA1D-201ENST00000288139 MYH16Q9H6N6 1097 aa10.95□□□□□ -0.66
CACNA1D-201ENST00000288139 GOLGA6L6A8MZA4 724 aa10.94□□□□□ -0.66
CACNA1D-201ENST00000288139 TULP1O00294 542 aaPredicted RBP10.94□□□□□ -0.66
CACNA1D-201ENST00000288139 EIF4G2P78344 907 aaKnown RBP eCLIP10.94□□□□□ -0.66
CACNA1D-201ENST00000288139 A0A0G2JS52 829 aa10.93□□□□□ -0.66
CACNA1D-201ENST00000288139 NRDCO43847 1150 aa10.93□□□□□ -0.66
CACNA1D-201ENST00000288139 MS4A1P11836 297 aa10.92□□□□□ -0.66
CACNA1D-201ENST00000288139 STAG3Q9UJ98 1225 aa10.92□□□□□ -0.66
CACNA1D-201ENST00000288139 PHLDB1Q86UU1 1377 aa10.9□□□□□ -0.66
CACNA1D-201ENST00000288139 MTUS2Q5JR59 1369 aa10.9□□□□□ -0.66
CACNA1D-201ENST00000288139 TMC1Q8TDI8 760 aa10.89□□□□□ -0.67
CACNA1D-201ENST00000288139 NOP58Q9Y2X3 529 aaKnown RBP10.89□□□□□ -0.67
CACNA1D-201ENST00000288139 ROCK2O75116 1388 aaKnown RBP10.89□□□□□ -0.67
CACNA1D-201ENST00000288139 SMARCA2P51531 1590 aa10.88□□□□□ -0.67
CACNA1D-201ENST00000288139 CCNB3Q8WWL7 1395 aa10.88□□□□□ -0.67
CACNA1D-201ENST00000288139 MRS2Q9HD23 443 aa10.88□□□□□ -0.67
CACNA1D-201ENST00000288139 MIER1Q8N108 512 aa10.87□□□□□ -0.67
CACNA1D-201ENST00000288139 NPHP1O15259 732 aa10.86□□□□□ -0.67
CACNA1D-201ENST00000288139 CLSTN1O94985 981 aa10.86□□□□□ -0.67
CACNA1D-201ENST00000288139 KIAA2012Q0VF49 1180 aa10.86□□□□□ -0.67
CACNA1D-201ENST00000288139 CHAF1AQ13111 956 aaPredicted RBP10.84□□□□□ -0.67
CACNA1D-201ENST00000288139 TOP2AP11388 1531 aaKnown RBP10.83□□□□□ -0.67
CACNA1D-201ENST00000288139 SUPT16HQ9Y5B9 1047 aaKnown RBP10.82□□□□□ -0.68
CACNA1D-201ENST00000288139 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
CACNA1D-201ENST00000288139 NGEFQ8N5V2 710 aa10.8□□□□□ -0.68
CACNA1D-201ENST00000288139 DDX10Q13206 875 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-201ENST00000288139 ZNF326Q5BKZ1 582 aaKnown RBP10.8□□□□□ -0.68
CACNA1D-201ENST00000288139 FANCIQ9NVI1 1328 aa10.8□□□□□ -0.68
CACNA1D-201ENST00000288139 CASC1Q6TDU7 716 aa10.8□□□□□ -0.68
CACNA1D-201ENST00000288139 GOLGA2Q08379 1002 aa10.8□□□□□ -0.68
CACNA1D-201ENST00000288139 FMN1Q68DA7 1419 aa10.8□□□□□ -0.68
CACNA1D-201ENST00000288139 NOC3LQ8WTT2 800 aaKnown RBP10.79□□□□□ -0.68
CACNA1D-201ENST00000288139 DNTTIP2Q5QJE6 756 aaKnown RBP10.79□□□□□ -0.68
CACNA1D-201ENST00000288139 RSPH6AQ9H0K4 717 aa10.79□□□□□ -0.68
CACNA1D-201ENST00000288139 WDR43Q15061 677 aaKnown RBP eCLIP10.79□□□□□ -0.68
CACNA1D-201ENST00000288139 TCERG1O14776 1098 aaKnown RBP10.78□□□□□ -0.68
CACNA1D-201ENST00000288139 ARHGAP35Q9NRY4 1499 aa10.78□□□□□ -0.68
CACNA1D-201ENST00000288139 SETD5Q9C0A6 1442 aa10.78□□□□□ -0.68
CACNA1D-201ENST00000288139 PDE3BQ13370 1112 aa10.78□□□□□ -0.68
CACNA1D-201ENST00000288139 KTN1Q86UP2 1357 aaKnown RBP10.77□□□□□ -0.69
CACNA1D-201ENST00000288139 PTMAP06454 111 aaKnown RBP10.76□□□□□ -0.69
CACNA1D-201ENST00000288139 AAMPQ13685 434 aa10.76□□□□□ -0.69
CACNA1D-201ENST00000288139 CALRP27797 417 aaKnown RBP10.76□□□□□ -0.69
CACNA1D-201ENST00000288139 KIF21BO75037 1637 aa10.74□□□□□ -0.69
CACNA1D-201ENST00000288139 PNNQ9H307 717 aaKnown RBP10.72□□□□□ -0.69
CACNA1D-201ENST00000288139 ERICH3Q5RHP9 1530 aa10.7□□□□□ -0.7
CACNA1D-201ENST00000288139 TSPY4P0CV99 314 aa10.7□□□□□ -0.7
CACNA1D-201ENST00000288139 TSPY10P0CW01 314 aa10.7□□□□□ -0.7
CACNA1D-201ENST00000288139 MTERF4Q7Z6M4 381 aaKnown RBP10.7□□□□□ -0.7
CACNA1D-201ENST00000288139 CFAP53Q96M91 514 aa10.7□□□□□ -0.7
CACNA1D-201ENST00000288139 RALBP1Q15311 655 aa10.7□□□□□ -0.7
CACNA1D-201ENST00000288139 CHMP4AQ9BY43 222 aa10.7□□□□□ -0.7
CACNA1D-201ENST00000288139 CUX1P39880 1505 aa10.69□□□□□ -0.7
CACNA1D-201ENST00000288139 NBR1Q14596 966 aa10.69□□□□□ -0.7
CACNA1D-201ENST00000288139 ISY1Q9ULR0 285 aaKnown RBP10.68□□□□□ -0.7
CACNA1D-201ENST00000288139 FAM9BQ8IZU0 186 aa10.68□□□□□ -0.7
CACNA1D-201ENST00000288139 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
CACNA1D-201ENST00000288139 TMX4Q9H1E5 349 aaPredicted RBP10.68□□□□□ -0.7
CACNA1D-201ENST00000288139 GON4LQ3T8J9 2241 aa10.67□□□□□ -0.7
CACNA1D-201ENST00000288139 GBP4Q96PP9 640 aa10.66□□□□□ -0.7
CACNA1D-201ENST00000288139 NPM1P06748 294 aaKnown RBP eCLIP10.66□□□□□ -0.7
CACNA1D-201ENST00000288139 A0A0U1RQG5 324 aaPredicted RBP10.66□□□□□ -0.7
CACNA1D-201ENST00000288139 C14orf37Q86TY3 774 aa10.66□□□□□ -0.7
CACNA1D-201ENST00000288139 SYAP1Q96A49 352 aaPredicted RBP10.65□□□□□ -0.7
CACNA1D-201ENST00000288139 PEG3Q9GZU2 1588 aa10.65□□□□□ -0.7
CACNA1D-201ENST00000288139 IPO9Q96P70 1041 aaKnown RBP10.65□□□□□ -0.7
CACNA1D-201ENST00000288139 ZBED9Q6R2W3 1325 aa10.65□□□□□ -0.7
CACNA1D-201ENST00000288139 EIF3AQ14152 1382 aaKnown RBP10.64□□□□□ -0.71
CACNA1D-201ENST00000288139 ARXQ96QS3 562 aa10.64□□□□□ -0.71
CACNA1D-201ENST00000288139 DEKP35659 375 aaKnown RBP10.64□□□□□ -0.71
CACNA1D-201ENST00000288139 KNSTRNQ9Y448 316 aa10.64□□□□□ -0.71
CACNA1D-201ENST00000288139 PLPPR3Q6T4P5 718 aa10.64□□□□□ -0.71
CACNA1D-201ENST00000288139 SMARCA4P51532 1647 aa10.63□□□□□ -0.71
CACNA1D-201ENST00000288139 FGD1P98174 961 aa10.63□□□□□ -0.71
CACNA1D-201ENST00000288139 MAP7D2Q96T17 732 aa10.63□□□□□ -0.71
CACNA1D-201ENST00000288139 MAPK8IP3Q9UPT6 1336 aa10.62□□□□□ -0.71
CACNA1D-201ENST00000288139 CCDC18Q5T9S5 1454 aa10.62□□□□□ -0.71
CACNA1D-201ENST00000288139 MSNP26038 577 aaKnown RBP10.62□□□□□ -0.71
CACNA1D-201ENST00000288139 CEP89Q96ST8 783 aa10.62□□□□□ -0.71
CACNA1D-201ENST00000288139 GOLGA6L1Q8N7Z2 621 aa10.61□□□□□ -0.71
CACNA1D-201ENST00000288139 ABCC8Q09428 1581 aa10.61□□□□□ -0.71
CACNA1D-201ENST00000288139 GOLGA6L4A6NEF3 574 aa10.61□□□□□ -0.71
CACNA1D-201ENST00000288139 HSCBQ8IWL3 235 aa10.6□□□□□ -0.71
CACNA1D-201ENST00000288139 BICRAQ9NZM4 1560 aa10.6□□□□□ -0.71
CACNA1D-201ENST00000288139 PHF14O94880 888 aa10.6□□□□□ -0.71
CACNA1D-201ENST00000288139 CCDC34Q96HJ3 373 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms