RNA–Protein interactions for RNA: ENST00000288050.8

PDPR-201, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPR, Length 9,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-201ENST00000288050 CASC1Q6TDU7 716 aa13.01□□□□□ -0.33
PDPR-201ENST00000288050 KIAA2012Q0VF49 1180 aa12.98□□□□□ -0.33
PDPR-201ENST00000288050 SCAF1Q9H7N4 1312 aaKnown RBP12.98□□□□□ -0.33
PDPR-201ENST00000288050 TPRNQ4KMQ1 711 aa12.98□□□□□ -0.33
PDPR-201ENST00000288050 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
PDPR-201ENST00000288050 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
PDPR-201ENST00000288050 SETQ01105 290 aaPredicted RBP12.96□□□□□ -0.34
PDPR-201ENST00000288050 PNNQ9H307 717 aaKnown RBP12.96□□□□□ -0.34
PDPR-201ENST00000288050 MSNP26038 577 aaKnown RBP12.94□□□□□ -0.34
PDPR-201ENST00000288050 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
PDPR-201ENST00000288050 CHGAP10645 457 aaKnown RBP12.93□□□□□ -0.34
PDPR-201ENST00000288050 A0A0U1RQG5 324 aaPredicted RBP12.92□□□□□ -0.34
PDPR-201ENST00000288050 GOLGA6L1Q8N7Z2 621 aa12.92□□□□□ -0.34
PDPR-201ENST00000288050 SENP3Q9H4L4 574 aaPredicted RBP12.9□□□□□ -0.34
PDPR-201ENST00000288050 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
PDPR-201ENST00000288050 DRC7Q8IY82 874 aa12.88□□□□□ -0.35
PDPR-201ENST00000288050 USP35Q9P2H5 1018 aa12.88□□□□□ -0.35
PDPR-201ENST00000288050 WDR43Q15061 677 aaKnown RBP eCLIP12.85□□□□□ -0.35
PDPR-201ENST00000288050 PTMSP20962 102 aa12.85□□□□□ -0.35
PDPR-201ENST00000288050 CCDC180Q9P1Z9 1646 aa12.85□□□□□ -0.35
PDPR-201ENST00000288050 PPM1GO15355 546 aaPredicted RBP12.84□□□□□ -0.35
PDPR-201ENST00000288050 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
PDPR-201ENST00000288050 NPM1P06748 294 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDPR-201ENST00000288050 SALL2Q9Y467 1007 aaPredicted RBP12.83□□□□□ -0.36
PDPR-201ENST00000288050 FAM9BQ8IZU0 186 aa12.83□□□□□ -0.36
PDPR-201ENST00000288050 GOLGA6L4A6NEF3 574 aa12.82□□□□□ -0.36
PDPR-201ENST00000288050 ARID4BQ4LE39 1312 aaPredicted RBP12.82□□□□□ -0.36
PDPR-201ENST00000288050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.81□□□□□ -0.36
PDPR-201ENST00000288050 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
PDPR-201ENST00000288050 FGD1P98174 961 aa12.8□□□□□ -0.36
PDPR-201ENST00000288050 ZBTB7CA1YPR0 619 aa12.78□□□□□ -0.36
PDPR-201ENST00000288050 ARID3AQ99856 593 aa12.78□□□□□ -0.36
PDPR-201ENST00000288050 TMC1Q8TDI8 760 aa12.77□□□□□ -0.36
PDPR-201ENST00000288050 NPHP1O15259 732 aa12.77□□□□□ -0.37
PDPR-201ENST00000288050 HSP90AB1P08238 724 aaKnown RBP12.75□□□□□ -0.37
PDPR-201ENST00000288050 C14orf37Q86TY3 774 aa12.74□□□□□ -0.37
PDPR-201ENST00000288050 NAP1L2Q9ULW6 460 aaPredicted RBP12.74□□□□□ -0.37
PDPR-201ENST00000288050 TONSLQ96HA7 1378 aa12.73□□□□□ -0.37
PDPR-201ENST00000288050 RRP12Q5JTH9 1297 aaKnown RBP12.71□□□□□ -0.37
PDPR-201ENST00000288050 CHIC2Q9UKJ5 165 aa12.71□□□□□ -0.38
PDPR-201ENST00000288050 LAS1LQ9Y4W2 734 aaKnown RBP12.7□□□□□ -0.38
PDPR-201ENST00000288050 GNL2Q13823 731 aaKnown RBP12.7□□□□□ -0.38
PDPR-201ENST00000288050 PATL2C9JE40 543 aaKnown RBP12.7□□□□□ -0.38
PDPR-201ENST00000288050 KRI1Q8N9T8 703 aaKnown RBP12.7□□□□□ -0.38
PDPR-201ENST00000288050 FTSJ3Q8IY81 847 aaKnown RBP12.69□□□□□ -0.38
PDPR-201ENST00000288050 KCNJ4P48050 445 aa12.69□□□□□ -0.38
PDPR-201ENST00000288050 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
PDPR-201ENST00000288050 PDE4CQ08493 712 aa12.69□□□□□ -0.38
PDPR-201ENST00000288050 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
PDPR-201ENST00000288050 CHMP7Q8WUX9 453 aaPredicted RBP12.67□□□□□ -0.38
PDPR-201ENST00000288050 DCAF1Q9Y4B6 1507 aa12.67□□□□□ -0.38
PDPR-201ENST00000288050 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
PDPR-201ENST00000288050 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
PDPR-201ENST00000288050 NOP58Q9Y2X3 529 aaKnown RBP12.65□□□□□ -0.38
PDPR-201ENST00000288050 APPP05067 770 aa12.65□□□□□ -0.38
PDPR-201ENST00000288050 HSCBQ8IWL3 235 aa12.64□□□□□ -0.39
PDPR-201ENST00000288050 CEP89Q96ST8 783 aa12.64□□□□□ -0.39
PDPR-201ENST00000288050 TPM4P67936 248 aa12.64□□□□□ -0.39
PDPR-201ENST00000288050 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
PDPR-201ENST00000288050 KDM2AQ9Y2K7 1162 aa12.63□□□□□ -0.39
PDPR-201ENST00000288050 KCNH8Q96L42 1107 aa12.63□□□□□ -0.39
PDPR-201ENST00000288050 ISY1Q9ULR0 285 aaKnown RBP12.62□□□□□ -0.39
PDPR-201ENST00000288050 OS9Q13438 667 aaPredicted RBP12.61□□□□□ -0.39
PDPR-201ENST00000288050 STK11IPQ8N1F8 1099 aa12.61□□□□□ -0.39
PDPR-201ENST00000288050 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
PDPR-201ENST00000288050 TAF7LQ5H9L4 462 aa12.61□□□□□ -0.39
PDPR-201ENST00000288050 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
PDPR-201ENST00000288050 MCCP23508 829 aa12.6□□□□□ -0.39
PDPR-201ENST00000288050 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.59□□□□□ -0.39
PDPR-201ENST00000288050 SYAP1Q96A49 352 aaPredicted RBP12.58□□□□□ -0.4
PDPR-201ENST00000288050 CHMP4BQ9H444 224 aaKnown RBP12.58□□□□□ -0.4
PDPR-201ENST00000288050 TPM3P06753 285 aa12.57□□□□□ -0.4
PDPR-201ENST00000288050 ERCC6Q03468 1493 aa12.57□□□□□ -0.4
PDPR-201ENST00000288050 CCDC34Q96HJ3 373 aa12.56□□□□□ -0.4
PDPR-201ENST00000288050 HTATSF1O43719 755 aaKnown RBP12.55□□□□□ -0.4
PDPR-201ENST00000288050 GPS2Q13227 327 aa12.55□□□□□ -0.4
PDPR-201ENST00000288050 HSP90AA2PQ14568 343 aaPredicted RBP12.55□□□□□ -0.4
PDPR-201ENST00000288050 HMMRO75330 724 aa12.55□□□□□ -0.4
PDPR-201ENST00000288050 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
PDPR-201ENST00000288050 CCDC70Q6NSX1 233 aa12.54□□□□□ -0.4
PDPR-201ENST00000288050 PPP1R15AO75807 674 aaPredicted RBP12.54□□□□□ -0.4
PDPR-201ENST00000288050 DEKP35659 375 aaKnown RBP12.54□□□□□ -0.4
PDPR-201ENST00000288050 HSP90B1P14625 803 aaKnown RBP12.53□□□□□ -0.4
PDPR-201ENST00000288050 NOM1Q5C9Z4 860 aaKnown RBP12.53□□□□□ -0.4
PDPR-201ENST00000288050 MEX3CQ5U5Q3 659 aaKnown RBP12.52□□□□□ -0.41
PDPR-201ENST00000288050 ZNF771Q7L3S4 317 aaPredicted RBP12.51□□□□□ -0.41
PDPR-201ENST00000288050 GBP4Q96PP9 640 aa12.51□□□□□ -0.41
PDPR-201ENST00000288050 GOLGA6L3A6NEY3 463 aa12.5□□□□□ -0.41
PDPR-201ENST00000288050 CFAP53Q96M91 514 aa12.5□□□□□ -0.41
PDPR-201ENST00000288050 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
PDPR-201ENST00000288050 MTUS2Q5JR59 1369 aa12.49□□□□□ -0.41
PDPR-201ENST00000288050 MAP7D2Q96T17 732 aa12.49□□□□□ -0.41
PDPR-201ENST00000288050 RGS3P49796 1198 aa12.49□□□□□ -0.41
PDPR-201ENST00000288050 TEX35Q5T0J7 233 aa12.48□□□□□ -0.41
PDPR-201ENST00000288050 TSPY4P0CV99 314 aa12.48□□□□□ -0.41
PDPR-201ENST00000288050 TSPY10P0CW01 314 aa12.48□□□□□ -0.41
PDPR-201ENST00000288050 ZCCHC6Q5VYS8 1495 aaKnown RBP12.48□□□□□ -0.41
PDPR-201ENST00000288050 CCDC191Q8NCU4 936 aa12.47□□□□□ -0.41
PDPR-201ENST00000288050 HIRIP3Q9BW71 556 aaPredicted RBP12.46□□□□□ -0.41
PDPR-201ENST00000288050 RRP7BPQ9NSQ0 103 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms