RNA–Protein interactions for RNA: ENST00000282641.6

A1CF-201, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene A1CF, Length 9,350 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-201ENST00000282641 PKNOX2Q96KN3 472 aa11.39□□□□□ -0.59
A1CF-201ENST00000282641 GOLGA6L22H0YM25 854 aa11.38□□□□□ -0.59
A1CF-201ENST00000282641 CNGB1Q14028 1251 aaPredicted RBP11.37□□□□□ -0.59
A1CF-201ENST00000282641 MS4A1P11836 297 aa11.36□□□□□ -0.59
A1CF-201ENST00000282641 CLIP1P30622 1438 aa11.36□□□□□ -0.59
A1CF-201ENST00000282641 PHLDB1Q86UU1 1377 aa11.36□□□□□ -0.59
A1CF-201ENST00000282641 TCERG1O14776 1098 aaKnown RBP11.35□□□□□ -0.59
A1CF-201ENST00000282641 CALRP27797 417 aaKnown RBP11.34□□□□□ -0.59
A1CF-201ENST00000282641 TONSLQ96HA7 1378 aa11.34□□□□□ -0.59
A1CF-201ENST00000282641 VPS8Q8N3P4 1428 aa11.34□□□□□ -0.59
A1CF-201ENST00000282641 KTN1Q86UP2 1357 aaKnown RBP11.34□□□□□ -0.59
A1CF-201ENST00000282641 PNNQ9H307 717 aaKnown RBP11.34□□□□□ -0.59
A1CF-201ENST00000282641 IPO9Q96P70 1041 aaKnown RBP11.33□□□□□ -0.6
A1CF-201ENST00000282641 A0A0U1RQG5 324 aaPredicted RBP11.33□□□□□ -0.6
A1CF-201ENST00000282641 AAMPQ13685 434 aa11.33□□□□□ -0.6
A1CF-201ENST00000282641 FAM43AQ8N2R8 423 aa11.32□□□□□ -0.6
A1CF-201ENST00000282641 TSPYL1Q9H0U9 437 aa11.32□□□□□ -0.6
A1CF-201ENST00000282641 TPM2P07951 284 aa11.31□□□□□ -0.6
A1CF-201ENST00000282641 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
A1CF-201ENST00000282641 HSP90AA2PQ14568 343 aaPredicted RBP11.31□□□□□ -0.6
A1CF-201ENST00000282641 GOLGA6L3A6NEY3 463 aa11.3□□□□□ -0.6
A1CF-201ENST00000282641 C11orf95C9JLR9 678 aaPredicted RBP11.3□□□□□ -0.6
A1CF-201ENST00000282641 MIER1Q8N108 512 aa11.29□□□□□ -0.6
A1CF-201ENST00000282641 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
A1CF-201ENST00000282641 ARXQ96QS3 562 aa11.28□□□□□ -0.6
A1CF-201ENST00000282641 NACADO15069 1562 aa11.27□□□□□ -0.6
A1CF-201ENST00000282641 CHAF1AQ13111 956 aaPredicted RBP11.25□□□□□ -0.61
A1CF-201ENST00000282641 CHMP4BQ9H444 224 aaKnown RBP11.25□□□□□ -0.61
A1CF-201ENST00000282641 KIF21BO75037 1637 aa11.24□□□□□ -0.61
A1CF-201ENST00000282641 FHAD1B1AJZ9 1412 aa11.24□□□□□ -0.61
A1CF-201ENST00000282641 CCDC144AA2RUR9 1427 aa11.23□□□□□ -0.61
A1CF-201ENST00000282641 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
A1CF-201ENST00000282641 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
A1CF-201ENST00000282641 NGEFQ8N5V2 710 aa11.23□□□□□ -0.61
A1CF-201ENST00000282641 EIF3AQ14152 1382 aaKnown RBP11.22□□□□□ -0.61
A1CF-201ENST00000282641 ARID3AQ99856 593 aa11.22□□□□□ -0.61
A1CF-201ENST00000282641 PDE3BQ13370 1112 aa11.22□□□□□ -0.61
A1CF-201ENST00000282641 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.21□□□□□ -0.61
A1CF-201ENST00000282641 RSF1Q96T23 1441 aaPredicted RBP11.2□□□□□ -0.62
A1CF-201ENST00000282641 SKOR2Q2VWA4 1001 aaPredicted RBP11.19□□□□□ -0.62
A1CF-201ENST00000282641 GSE1Q14687 1217 aa11.19□□□□□ -0.62
A1CF-201ENST00000282641 CCNB3Q8WWL7 1395 aa11.18□□□□□ -0.62
A1CF-201ENST00000282641 ZBED9Q6R2W3 1325 aa11.18□□□□□ -0.62
A1CF-201ENST00000282641 NAP1L5Q96NT1 182 aaPredicted RBP11.17□□□□□ -0.62
A1CF-201ENST00000282641 DDX11L8A8MPP1 907 aa11.17□□□□□ -0.62
A1CF-201ENST00000282641 HNRNPUQ00839 825 aaKnown RBP eCLIP11.17□□□□□ -0.62
A1CF-201ENST00000282641 CCDC18Q5T9S5 1454 aa11.16□□□□□ -0.62
A1CF-201ENST00000282641 NINLQ9Y2I6 1382 aa11.15□□□□□ -0.62
A1CF-201ENST00000282641 PODXL2Q9NZ53 605 aa11.15□□□□□ -0.63
A1CF-201ENST00000282641 NRDCO43847 1150 aa11.15□□□□□ -0.63
A1CF-201ENST00000282641 BCANQ96GW7 911 aa11.15□□□□□ -0.63
A1CF-201ENST00000282641 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
A1CF-201ENST00000282641 HNRNPUL2Q1KMD3 747 aaKnown RBP11.14□□□□□ -0.63
A1CF-201ENST00000282641 HMGN5P82970 282 aaKnown RBP11.13□□□□□ -0.63
A1CF-201ENST00000282641 MSNP26038 577 aaKnown RBP11.13□□□□□ -0.63
A1CF-201ENST00000282641 PLEKHH2Q8IVE3 1493 aa11.13□□□□□ -0.63
A1CF-201ENST00000282641 CCDC66A2RUB6 948 aa11.13□□□□□ -0.63
A1CF-201ENST00000282641 DHX8Q14562 1220 aaKnown RBP11.12□□□□□ -0.63
A1CF-201ENST00000282641 TERF1P54274 439 aa11.11□□□□□ -0.63
A1CF-201ENST00000282641 GBP4Q96PP9 640 aa11.11□□□□□ -0.63
A1CF-201ENST00000282641 GOLGA6L6A8MZA4 724 aa11.11□□□□□ -0.63
A1CF-201ENST00000282641 CREBRFQ8IUR6 639 aa11.11□□□□□ -0.63
A1CF-201ENST00000282641 FAM193AP78312 1265 aa11.1□□□□□ -0.63
A1CF-201ENST00000282641 MAP3K1Q13233 1512 aa11.1□□□□□ -0.63
A1CF-201ENST00000282641 NBR1Q14596 966 aa11.09□□□□□ -0.63
A1CF-201ENST00000282641 SYAP1Q96A49 352 aaPredicted RBP11.08□□□□□ -0.64
A1CF-201ENST00000282641 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
A1CF-201ENST00000282641 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
A1CF-201ENST00000282641 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
A1CF-201ENST00000282641 CAVIN1Q6NZI2 390 aaKnown RBP11.07□□□□□ -0.64
A1CF-201ENST00000282641 TPM3P06753 285 aa11.07□□□□□ -0.64
A1CF-201ENST00000282641 TOP2AP11388 1531 aaKnown RBP11.06□□□□□ -0.64
A1CF-201ENST00000282641 MCM5P33992 734 aa11.05□□□□□ -0.64
A1CF-201ENST00000282641 ANKRD30AQ9BXX3 1397 aa11.05□□□□□ -0.64
A1CF-201ENST00000282641 PHF14O94880 888 aa11.05□□□□□ -0.64
A1CF-201ENST00000282641 SETD5Q9C0A6 1442 aa11.05□□□□□ -0.64
A1CF-201ENST00000282641 CENPJQ9HC77 1338 aaPredicted RBP11.05□□□□□ -0.64
A1CF-201ENST00000282641 CUX2O14529 1486 aa11.04□□□□□ -0.64
A1CF-201ENST00000282641 PDCL2Q8N4E4 241 aa11.04□□□□□ -0.64
A1CF-201ENST00000282641 GOLGA6L1Q8N7Z2 621 aa11.04□□□□□ -0.64
A1CF-201ENST00000282641 KIAA2012Q0VF49 1180 aa11.04□□□□□ -0.64
A1CF-201ENST00000282641 EIF4G2P78344 907 aaKnown RBP eCLIP11.04□□□□□ -0.64
A1CF-201ENST00000282641 CUX1P39880 1505 aa11.03□□□□□ -0.64
A1CF-201ENST00000282641 AXDND1Q5T1B0 1012 aaPredicted RBP11.03□□□□□ -0.64
A1CF-201ENST00000282641 CNTLNQ9NXG0 1405 aa11.03□□□□□ -0.64
A1CF-201ENST00000282641 ZMYM3Q14202 1370 aa11.03□□□□□ -0.64
A1CF-201ENST00000282641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.02□□□□□ -0.64
A1CF-201ENST00000282641 PDCL3Q9H2J4 239 aa11.02□□□□□ -0.64
A1CF-201ENST00000282641 CANXP27824 592 aaKnown RBP11.01□□□□□ -0.65
A1CF-201ENST00000282641 MRS2Q9HD23 443 aa11.01□□□□□ -0.65
A1CF-201ENST00000282641 CALD1Q05682 793 aaKnown RBP11.01□□□□□ -0.65
A1CF-201ENST00000282641 MRE11P49959 708 aa11.01□□□□□ -0.65
A1CF-201ENST00000282641 NOM1Q5C9Z4 860 aaKnown RBP11□□□□□ -0.65
A1CF-201ENST00000282641 TAF7LQ5H9L4 462 aa11□□□□□ -0.65
A1CF-201ENST00000282641 INSRP06213 1382 aa11□□□□□ -0.65
A1CF-201ENST00000282641 HS1BP3Q53T59 392 aa10.99□□□□□ -0.65
A1CF-201ENST00000282641 CDCA8Q53HL2 280 aa10.99□□□□□ -0.65
A1CF-201ENST00000282641 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
A1CF-201ENST00000282641 RALBP1Q15311 655 aa10.98□□□□□ -0.65
A1CF-201ENST00000282641 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms