RNA–Protein interactions for RNA: ENST00000280663.12

CACNA2D4-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 5,936 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-201ENST00000280663 NAP1L5Q96NT1 182 aaPredicted RBP17.71■□□□□ 0.43
CACNA2D4-201ENST00000280663 PTMAP06454 111 aaKnown RBP17.71■□□□□ 0.43
CACNA2D4-201ENST00000280663 CHIC2Q9UKJ5 165 aa17.7■□□□□ 0.42
CACNA2D4-201ENST00000280663 SUPT16HQ9Y5B9 1047 aaKnown RBP17.69■□□□□ 0.42
CACNA2D4-201ENST00000280663 CDK11BP21127 795 aaKnown RBP17.68■□□□□ 0.42
CACNA2D4-201ENST00000280663 STAG3Q9UJ98 1225 aa17.67■□□□□ 0.42
CACNA2D4-201ENST00000280663 CLIP1P30622 1438 aa17.66■□□□□ 0.42
CACNA2D4-201ENST00000280663 DNTTIP2Q5QJE6 756 aaKnown RBP17.65■□□□□ 0.42
CACNA2D4-201ENST00000280663 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
CACNA2D4-201ENST00000280663 ESF1Q9H501 851 aaKnown RBP17.64■□□□□ 0.41
CACNA2D4-201ENST00000280663 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
CACNA2D4-201ENST00000280663 MTUS2Q5JR59 1369 aa17.64■□□□□ 0.41
CACNA2D4-201ENST00000280663 CASC1Q6TDU7 716 aa17.62■□□□□ 0.41
CACNA2D4-201ENST00000280663 LAS1LQ9Y4W2 734 aaKnown RBP17.62■□□□□ 0.41
CACNA2D4-201ENST00000280663 RTN4Q9NQC3 1192 aaKnown RBP17.61■□□□□ 0.41
CACNA2D4-201ENST00000280663 TSPY4P0CV99 314 aa17.6■□□□□ 0.41
CACNA2D4-201ENST00000280663 TSPY10P0CW01 314 aa17.6■□□□□ 0.41
CACNA2D4-201ENST00000280663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.47e-9■□□□□ 9.3
CACNA2D4-201ENST00000280663 ZRSR1Q15695 479 aaKnown RBP17.58■□□□□ 0.4
CACNA2D4-201ENST00000280663 EEA1Q15075 1411 aa17.57■□□□□ 0.4
CACNA2D4-201ENST00000280663 L1TD1Q5T7N2 865 aaKnown RBP17.56■□□□□ 0.4
CACNA2D4-201ENST00000280663 DEKP35659 375 aaKnown RBP17.55■□□□□ 0.4
CACNA2D4-201ENST00000280663 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
CACNA2D4-201ENST00000280663 CEP162Q5TB80 1403 aa17.53■□□□□ 0.4
CACNA2D4-201ENST00000280663 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
CACNA2D4-201ENST00000280663 CFAP53Q96M91 514 aa17.53■□□□□ 0.4
CACNA2D4-201ENST00000280663 CDCA8Q53HL2 280 aa17.52■□□□□ 0.4
CACNA2D4-201ENST00000280663 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.39
CACNA2D4-201ENST00000280663 FTSJ3Q8IY81 847 aaKnown RBP17.51■□□□□ 0.39
CACNA2D4-201ENST00000280663 GOLGA6L6A8MZA4 724 aa17.48■□□□□ 0.39
CACNA2D4-201ENST00000280663 CHMP4BQ9H444 224 aaKnown RBP17.47■□□□□ 0.39
CACNA2D4-201ENST00000280663 KNSTRNQ9Y448 316 aa17.47■□□□□ 0.39
CACNA2D4-201ENST00000280663 RRP7BPQ9NSQ0 103 aa17.46■□□□□ 0.39
CACNA2D4-201ENST00000280663 HSP90AB1P08238 724 aaKnown RBP17.46■□□□□ 0.39
CACNA2D4-201ENST00000280663 RBM19Q9Y4C8 960 aaKnown RBP17.46■□□□□ 0.39
CACNA2D4-201ENST00000280663 MS4A1P11836 297 aa17.45■□□□□ 0.38
CACNA2D4-201ENST00000280663 RGS3P49796 1198 aa17.45■□□□□ 0.38
CACNA2D4-201ENST00000280663 CHAF1AQ13111 956 aaPredicted RBP17.43■□□□□ 0.38
CACNA2D4-201ENST00000280663 CCER2I3L3R5 266 aa17.43■□□□□ 0.38
CACNA2D4-201ENST00000280663 MSNP26038 577 aaKnown RBP17.43■□□□□ 0.38
CACNA2D4-201ENST00000280663 B4GALNT3Q6L9W6 998 aa17.42■□□□□ 0.38
CACNA2D4-201ENST00000280663 NRDCO43847 1150 aa17.42■□□□□ 0.38
CACNA2D4-201ENST00000280663 HSCBQ8IWL3 235 aa17.4■□□□□ 0.38
CACNA2D4-201ENST00000280663 TNIKQ9UKE5 1360 aa17.39■□□□□ 0.38
CACNA2D4-201ENST00000280663 NPM1P06748 294 aaKnown RBP eCLIP17.39■□□□□ 0.38
CACNA2D4-201ENST00000280663 CARD11Q9BXL7 1154 aa17.38■□□□□ 0.37
CACNA2D4-201ENST00000280663 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
CACNA2D4-201ENST00000280663 PTMSP20962 102 aa17.36■□□□□ 0.37
CACNA2D4-201ENST00000280663 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
CACNA2D4-201ENST00000280663 MAPK8IP3Q9UPT6 1336 aa17.35■□□□□ 0.37
CACNA2D4-201ENST00000280663 CFAP44Q96MT7 982 aa17.33■□□□□ 0.37
CACNA2D4-201ENST00000280663 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.36
CACNA2D4-201ENST00000280663 NUDCQ9Y266 331 aa17.33■□□□□ 0.36
CACNA2D4-201ENST00000280663 TPRNQ4KMQ1 711 aa17.32■□□□□ 0.36
CACNA2D4-201ENST00000280663 FRAT1Q92837 279 aaPredicted RBP17.32■□□□□ 0.36
CACNA2D4-201ENST00000280663 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
CACNA2D4-201ENST00000280663 SENP3-EIF4A1A0A087X0R7 540 aa17.3■□□□□ 0.36
CACNA2D4-201ENST00000280663 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
CACNA2D4-201ENST00000280663 SIN3AQ96ST3 1273 aa17.26■□□□□ 0.35
CACNA2D4-201ENST00000280663 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
CACNA2D4-201ENST00000280663 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
CACNA2D4-201ENST00000280663 GOLGA6L4A6NEF3 574 aa17.25■□□□□ 0.35
CACNA2D4-201ENST00000280663 TCERG1O14776 1098 aaKnown RBP17.25■□□□□ 0.35
CACNA2D4-201ENST00000280663 GBP4Q96PP9 640 aa17.25■□□□□ 0.35
CACNA2D4-201ENST00000280663 MCCP23508 829 aa17.24■□□□□ 0.35
CACNA2D4-201ENST00000280663 TSHZ2Q9NRE2 1034 aa17.23■□□□□ 0.35
CACNA2D4-201ENST00000280663 PLEKHD1A6NEE1 506 aa17.21■□□□□ 0.35
CACNA2D4-201ENST00000280663 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
CACNA2D4-201ENST00000280663 CC2D1BQ5T0F9 858 aaKnown RBP17.2■□□□□ 0.34
CACNA2D4-201ENST00000280663 KIAA2012Q0VF49 1180 aa17.19■□□□□ 0.34
CACNA2D4-201ENST00000280663 DRC7Q8IY82 874 aa17.19■□□□□ 0.34
CACNA2D4-201ENST00000280663 FGD1P98174 961 aa17.19■□□□□ 0.34
CACNA2D4-201ENST00000280663 CCNB3Q8WWL7 1395 aa17.19■□□□□ 0.34
CACNA2D4-201ENST00000280663 WRNQ14191 1432 aaPredicted RBP eCLIP17.19■□□□□ 0.34
CACNA2D4-201ENST00000280663 IPO9Q96P70 1041 aaKnown RBP17.18■□□□□ 0.34
CACNA2D4-201ENST00000280663 NACADO15069 1562 aa17.18■□□□□ 0.34
CACNA2D4-201ENST00000280663 KCNJ4P48050 445 aa17.18■□□□□ 0.34
CACNA2D4-201ENST00000280663 CFDP1Q9UEE9 299 aaPredicted RBP17.18■□□□□ 0.34
CACNA2D4-201ENST00000280663 ZBTB7CA1YPR0 619 aa17.17■□□□□ 0.34
CACNA2D4-201ENST00000280663 TMF1P82094 1093 aa17.17■□□□□ 0.34
CACNA2D4-201ENST00000280663 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
CACNA2D4-201ENST00000280663 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
CACNA2D4-201ENST00000280663 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
CACNA2D4-201ENST00000280663 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
CACNA2D4-201ENST00000280663 OS9Q13438 667 aaPredicted RBP17.16■□□□□ 0.34
CACNA2D4-201ENST00000280663 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
CACNA2D4-201ENST00000280663 SPRYD3Q8NCJ5 442 aa17.15■□□□□ 0.34
CACNA2D4-201ENST00000280663 SYAP1Q96A49 352 aaPredicted RBP17.12■□□□□ 0.33
CACNA2D4-201ENST00000280663 ARID4BQ4LE39 1312 aaPredicted RBP17.11■□□□□ 0.33
CACNA2D4-201ENST00000280663 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.11■□□□□ 0.33
CACNA2D4-201ENST00000280663 RCAN3Q9UKA8 241 aa17.11■□□□□ 0.33
CACNA2D4-201ENST00000280663 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
CACNA2D4-201ENST00000280663 HAP1P54257 671 aaPredicted RBP17.1■□□□□ 0.33
CACNA2D4-201ENST00000280663 KTN1Q86UP2 1357 aaKnown RBP17.1■□□□□ 0.33
CACNA2D4-201ENST00000280663 SETD5Q9C0A6 1442 aa17.09■□□□□ 0.33
CACNA2D4-201ENST00000280663 U2SURPO15042 1029 aaKnown RBP17.09■□□□□ 0.33
CACNA2D4-201ENST00000280663 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
CACNA2D4-201ENST00000280663 RWDD1Q9H446 243 aaPredicted RBP17.09■□□□□ 0.33
CACNA2D4-201ENST00000280663 FHAD1B1AJZ9 1412 aa17.09■□□□□ 0.33
CACNA2D4-201ENST00000280663 RSPH6AQ9H0K4 717 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms