RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 GRIN2BQ13224 1484 aa19.07■□□□□ 0.64
SDE2-201ENST00000272091 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
SDE2-201ENST00000272091 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
SDE2-201ENST00000272091 EFCAB5A4FU69 1503 aa18.94■□□□□ 0.62
SDE2-201ENST00000272091 SAMD9Q5K651 1589 aa18.93■□□□□ 0.62
SDE2-201ENST00000272091 MAGI1Q96QZ7 1491 aaPredicted RBP18.9■□□□□ 0.62
SDE2-201ENST00000272091 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
SDE2-201ENST00000272091 FHOD3Q2V2M9 1422 aa18.88■□□□□ 0.61
SDE2-201ENST00000272091 GRIN2AQ12879 1464 aa18.87■□□□□ 0.61
SDE2-201ENST00000272091 IQGAP2Q13576 1575 aa18.86■□□□□ 0.61
SDE2-201ENST00000272091 PCF11O94913 1555 aaKnown RBP18.86■□□□□ 0.61
SDE2-201ENST00000272091 SYNJ2O15056 1496 aa18.84■□□□□ 0.61
SDE2-201ENST00000272091 P3H3Q8IVL6 736 aa18.83■□□□□ 0.61
SDE2-201ENST00000272091 CEP170Q5SW79 1584 aa18.82■□□□□ 0.6
SDE2-201ENST00000272091 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
SDE2-201ENST00000272091 TIAM1Q13009 1591 aa18.79■□□□□ 0.6
SDE2-201ENST00000272091 KANK4Q5T7N3 995 aaPredicted RBP18.78■□□□□ 0.6
SDE2-201ENST00000272091 UGGT2Q9NYU1 1516 aa18.78■□□□□ 0.6
SDE2-201ENST00000272091 KIAA0586Q9BVV6 1533 aa18.77■□□□□ 0.6
SDE2-201ENST00000272091 MAP3K1Q13233 1512 aa18.77■□□□□ 0.6
SDE2-201ENST00000272091 LRRIQ1Q96JM4 1722 aa18.77■□□□□ 0.6
SDE2-201ENST00000272091 APLP2Q06481 763 aa18.75■□□□□ 0.59
SDE2-201ENST00000272091 FYCO1Q9BQS8 1478 aa18.75■□□□□ 0.59
SDE2-201ENST00000272091 CASKIN1Q8WXD9 1431 aa18.74■□□□□ 0.59
SDE2-201ENST00000272091 NUP160Q12769 1436 aa18.73■□□□□ 0.59
SDE2-201ENST00000272091 FMN1Q68DA7 1419 aa18.71■□□□□ 0.59
SDE2-201ENST00000272091 DISP1Q96F81 1524 aa18.71■□□□□ 0.59
SDE2-201ENST00000272091 CHD1O14646 1710 aa18.71■□□□□ 0.59
SDE2-201ENST00000272091 KIAA0556O60303 1618 aa18.71■□□□□ 0.59
SDE2-201ENST00000272091 CHMP7Q8WUX9 453 aaPredicted RBP18.7■□□□□ 0.58
SDE2-201ENST00000272091 HRCP23327 699 aa18.68■□□□□ 0.58
SDE2-201ENST00000272091 LRRC9Q6ZRR7 1453 aa18.67■□□□□ 0.58
SDE2-201ENST00000272091 FBLN2P98095 1184 aa18.65■□□□□ 0.58
SDE2-201ENST00000272091 RRBP1Q9P2E9 1410 aaKnown RBP18.59■□□□□ 0.57
SDE2-201ENST00000272091 HECW1Q76N89 1606 aa18.58■□□□□ 0.57
SDE2-201ENST00000272091 ATP1B4Q9UN42 357 aaPredicted RBP18.56■□□□□ 0.56
SDE2-201ENST00000272091 MAGI3Q5TCQ9 1506 aa18.55■□□□□ 0.56
SDE2-201ENST00000272091 PHLDB1Q86UU1 1377 aa18.53■□□□□ 0.56
SDE2-201ENST00000272091 SHROOM2Q13796 1616 aa18.53■□□□□ 0.56
SDE2-201ENST00000272091 RAPGEF6Q8TEU7 1601 aa18.52■□□□□ 0.56
SDE2-201ENST00000272091 JPH4Q96JJ6 628 aa18.52■□□□□ 0.56
SDE2-201ENST00000272091 EPRSP07814 1512 aaKnown RBP18.51■□□□□ 0.55
SDE2-201ENST00000272091 CCDC18Q5T9S5 1454 aa18.51■□□□□ 0.55
SDE2-201ENST00000272091 CDK13Q14004 1512 aaKnown RBP18.5■□□□□ 0.55
SDE2-201ENST00000272091 NUP153P49790 1475 aaKnown RBP18.49■□□□□ 0.55
SDE2-201ENST00000272091 EHBP1L1Q8N3D4 1523 aa18.47■□□□□ 0.55
SDE2-201ENST00000272091 CCNB3Q8WWL7 1395 aa18.47■□□□□ 0.55
SDE2-201ENST00000272091 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
SDE2-201ENST00000272091 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
SDE2-201ENST00000272091 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
SDE2-201ENST00000272091 ARHGEF11O15085 1522 aa18.45■□□□□ 0.54
SDE2-201ENST00000272091 PLB1Q6P1J6 1458 aa18.45■□□□□ 0.54
SDE2-201ENST00000272091 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
SDE2-201ENST00000272091 PRG4Q92954 1404 aaPredicted RBP18.44■□□□□ 0.54
SDE2-201ENST00000272091 ABCA8O94911 1581 aa18.43■□□□□ 0.54
SDE2-201ENST00000272091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
SDE2-201ENST00000272091 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
SDE2-201ENST00000272091 ERCC6L2Q5T890 1561 aa18.42■□□□□ 0.54
SDE2-201ENST00000272091 NCOA2Q15596 1464 aa18.42■□□□□ 0.54
SDE2-201ENST00000272091 ARID3CA6NKF2 412 aa18.37■□□□□ 0.53
SDE2-201ENST00000272091 FGD6Q6ZV73 1430 aa18.35■□□□□ 0.53
SDE2-201ENST00000272091 MYOM3Q5VTT5 1437 aa18.33■□□□□ 0.52
SDE2-201ENST00000272091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.31■□□□□ 0.523e-6■■□□□ 12.8
SDE2-201ENST00000272091 ADCY10Q96PN6 1610 aa18.3■□□□□ 0.52
SDE2-201ENST00000272091 PTPRGP23470 1445 aa18.29■□□□□ 0.52
SDE2-201ENST00000272091 PTPN23Q9H3S7 1636 aa18.29■□□□□ 0.52
SDE2-201ENST00000272091 CCER1Q8TC90 406 aaPredicted RBP18.29■□□□□ 0.52
SDE2-201ENST00000272091 ATP10BO94823 1461 aa18.28■□□□□ 0.52
SDE2-201ENST00000272091 ZEB1P37275 1124 aaPredicted RBP18.28■□□□□ 0.52
SDE2-201ENST00000272091 KIF14Q15058 1648 aa18.27■□□□□ 0.52
SDE2-201ENST00000272091 TCOF1Q13428 1488 aaKnown RBP18.26■□□□□ 0.51
SDE2-201ENST00000272091 FAM50AQ14320 339 aaKnown RBP18.25■□□□□ 0.51
SDE2-201ENST00000272091 ITGAEP38570 1179 aa18.25■□□□□ 0.51
SDE2-201ENST00000272091 TROQ12816 1431 aaPredicted RBP18.25■□□□□ 0.51
SDE2-201ENST00000272091 PTPRKQ15262 1439 aa18.23■□□□□ 0.51
SDE2-201ENST00000272091 UACAQ9BZF9 1416 aa18.22■□□□□ 0.51
SDE2-201ENST00000272091 ABCC2Q92887 1545 aa18.21■□□□□ 0.51
SDE2-201ENST00000272091 MIA2Q96PC5 1412 aa18.19■□□□□ 0.5
SDE2-201ENST00000272091 CDK11AQ9UQ88 783 aaPredicted RBP18.17■□□□□ 0.5
SDE2-201ENST00000272091 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
SDE2-201ENST00000272091 ITSN2Q9NZM3 1697 aa18.16■□□□□ 0.5
SDE2-201ENST00000272091 RAB3GAP2Q9H2M9 1393 aa18.16■□□□□ 0.5
SDE2-201ENST00000272091 ABCC10Q5T3U5 1492 aa18.16■□□□□ 0.5
SDE2-201ENST00000272091 CDC42BPAQ5VT25 1732 aa18.16■□□□□ 0.5
SDE2-201ENST00000272091 SETD5Q9C0A6 1442 aa18.15■□□□□ 0.5
SDE2-201ENST00000272091 GPATCH8Q9UKJ3 1502 aaKnown RBP18.14■□□□□ 0.49
SDE2-201ENST00000272091 UHRF1BP1LA0JNW5 1464 aa18.14■□□□□ 0.49
SDE2-201ENST00000272091 ZCCHC11Q5TAX3 1644 aaKnown RBP18.13■□□□□ 0.49
SDE2-201ENST00000272091 DNMT1P26358 1616 aaKnown RBP18.1■□□□□ 0.49
SDE2-201ENST00000272091 PLEKHD1A6NEE1 506 aa18.08■□□□□ 0.49
SDE2-201ENST00000272091 KDM5BQ9UGL1 1544 aa18.08■□□□□ 0.49
SDE2-201ENST00000272091 HFM1A2PYH4 1435 aa18.08■□□□□ 0.48
SDE2-201ENST00000272091 GCC2Q8IWJ2 1684 aa18.08■□□□□ 0.48
SDE2-201ENST00000272091 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
SDE2-201ENST00000272091 ZNF644Q9H582 1327 aaPredicted RBP18.07■□□□□ 0.48
SDE2-201ENST00000272091 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
SDE2-201ENST00000272091 NAIPQ13075 1403 aa18.06■□□□□ 0.48
SDE2-201ENST00000272091 TTC37Q6PGP7 1564 aa18.05■□□□□ 0.48
SDE2-201ENST00000272091 CDC42BPBQ9Y5S2 1711 aa18.05■□□□□ 0.48
SDE2-201ENST00000272091 MAPKBP1O60336 1514 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms