RNA–Protein interactions for RNA: ENST00000269834.1

ZIM3-201, Transcript of zinc finger imprinted 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIM3, Length 2,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3-201ENST00000269834 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
ZIM3-201ENST00000269834 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
ZIM3-201ENST00000269834 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
ZIM3-201ENST00000269834 BAZ1AQ9NRL2 1556 aaPredicted RBP11.98□□□□□ -0.49
ZIM3-201ENST00000269834 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
ZIM3-201ENST00000269834 MROH2BQ7Z745 1585 aa11.94□□□□□ -0.5
ZIM3-201ENST00000269834 PROM2Q8N271 834 aa11.94□□□□□ -0.5
ZIM3-201ENST00000269834 UNC13AQ9UPW8 1703 aa11.93□□□□□ -0.5
ZIM3-201ENST00000269834 C1orf115Q9H7X2 142 aa11.92□□□□□ -0.5
ZIM3-201ENST00000269834 WIZO95785 1651 aa11.92□□□□□ -0.5
ZIM3-201ENST00000269834 CC2D2AQ9P2K1 1620 aa11.91□□□□□ -0.5
ZIM3-201ENST00000269834 NEUROD2Q15784 382 aa11.9□□□□□ -0.51
ZIM3-201ENST00000269834 MYT1Q01538 1121 aa11.88□□□□□ -0.51
ZIM3-201ENST00000269834 PABPN1Q86U42 306 aaKnown RBP eCLIP11.88□□□□□ -0.51
ZIM3-201ENST00000269834 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
ZIM3-201ENST00000269834 IGSF3O75054 1194 aa11.84□□□□□ -0.51
ZIM3-201ENST00000269834 ARID3CA6NKF2 412 aa11.83□□□□□ -0.52
ZIM3-201ENST00000269834 LMOD2Q6P5Q4 547 aa11.83□□□□□ -0.52
ZIM3-201ENST00000269834 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
ZIM3-201ENST00000269834 BICRAQ9NZM4 1560 aa11.82□□□□□ -0.52
ZIM3-201ENST00000269834 TOP2AP11388 1531 aaKnown RBP11.81□□□□□ -0.52
ZIM3-201ENST00000269834 CCDC9Q9Y3X0 531 aaKnown RBP11.81□□□□□ -0.52
ZIM3-201ENST00000269834 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
ZIM3-201ENST00000269834 ZMYND15Q9H091 742 aa11.78□□□□□ -0.52
ZIM3-201ENST00000269834 SMARCA4P51532 1647 aa11.76□□□□□ -0.53
ZIM3-201ENST00000269834 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.76□□□□□ -0.53
ZIM3-201ENST00000269834 WRNQ14191 1432 aaPredicted RBP eCLIP11.76□□□□□ -0.53
ZIM3-201ENST00000269834 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
ZIM3-201ENST00000269834 HOXD11P31277 338 aaPredicted RBP11.74□□□□□ -0.53
ZIM3-201ENST00000269834 FAM9AQ8IZU1 332 aaPredicted RBP11.74□□□□□ -0.53
ZIM3-201ENST00000269834 RSPH6AQ9H0K4 717 aa11.73□□□□□ -0.53
ZIM3-201ENST00000269834 SMARCA2P51531 1590 aa11.73□□□□□ -0.53
ZIM3-201ENST00000269834 SLC24A3Q9HC58 644 aa11.73□□□□□ -0.53
ZIM3-201ENST00000269834 ZBTB7CA1YPR0 619 aa11.71□□□□□ -0.53
ZIM3-201ENST00000269834 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
ZIM3-201ENST00000269834 EEA1Q15075 1411 aa11.69□□□□□ -0.54
ZIM3-201ENST00000269834 PDIA4P13667 645 aaKnown RBP11.65□□□□□ -0.54
ZIM3-201ENST00000269834 CCDC88BA6NC98 1476 aa11.65□□□□□ -0.54
ZIM3-201ENST00000269834 ABCC8Q09428 1581 aa11.65□□□□□ -0.55
ZIM3-201ENST00000269834 ZNF428Q96B54 188 aa11.64□□□□□ -0.55
ZIM3-201ENST00000269834 ZNF219Q9P2Y4 722 aaPredicted RBP11.64□□□□□ -0.55
ZIM3-201ENST00000269834 GTPBP6O43824 516 aaPredicted RBP11.63□□□□□ -0.55
ZIM3-201ENST00000269834 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
ZIM3-201ENST00000269834 TNIKQ9UKE5 1360 aa11.62□□□□□ -0.55
ZIM3-201ENST00000269834 CEP162Q5TB80 1403 aa11.62□□□□□ -0.55
ZIM3-201ENST00000269834 APBB1O00213 710 aa11.61□□□□□ -0.55
ZIM3-201ENST00000269834 ZC3H15Q8WU90 426 aaKnown RBP11.61□□□□□ -0.55
ZIM3-201ENST00000269834 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
ZIM3-201ENST00000269834 PEG3Q9GZU2 1588 aa11.6□□□□□ -0.55
ZIM3-201ENST00000269834 KCNV2Q8TDN2 545 aa11.59□□□□□ -0.55
ZIM3-201ENST00000269834 SOCS7O14512 581 aa11.58□□□□□ -0.55
ZIM3-201ENST00000269834 RNF25Q96BH1 459 aaPredicted RBP11.57□□□□□ -0.56
ZIM3-201ENST00000269834 KIF21BO75037 1637 aa11.56□□□□□ -0.56
ZIM3-201ENST00000269834 GPBP1L1Q9HC44 474 aaPredicted RBP11.56□□□□□ -0.56
ZIM3-201ENST00000269834 GOLGA3Q08378 1498 aa11.55□□□□□ -0.56
ZIM3-201ENST00000269834 KCTD17Q8N5Z5 321 aa11.55□□□□□ -0.56
ZIM3-201ENST00000269834 CCER1Q8TC90 406 aaPredicted RBP11.55□□□□□ -0.56
ZIM3-201ENST00000269834 IL27Q8NEV9 243 aa11.53□□□□□ -0.56
ZIM3-201ENST00000269834 SOGA1O94964 1423 aa11.52□□□□□ -0.57
ZIM3-201ENST00000269834 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.52□□□□□ -0.57
ZIM3-201ENST00000269834 RAD21O60216 631 aa11.52□□□□□ -0.57
ZIM3-201ENST00000269834 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
ZIM3-201ENST00000269834 ERCC6Q03468 1493 aa11.49□□□□□ -0.57
ZIM3-201ENST00000269834 CEP164Q9UPV0 1460 aa11.48□□□□□ -0.57
ZIM3-201ENST00000269834 MKRN3Q13064 507 aaKnown RBP11.47□□□□□ -0.57
ZIM3-201ENST00000269834 FOXD4L5Q5VV16 416 aaPredicted RBP11.47□□□□□ -0.57
ZIM3-201ENST00000269834 FOXD4L4Q8WXT5 416 aaPredicted RBP11.47□□□□□ -0.57
ZIM3-201ENST00000269834 CHMP4AQ9BY43 222 aa11.47□□□□□ -0.57
ZIM3-201ENST00000269834 MTMR7Q9Y216 660 aa11.47□□□□□ -0.57
ZIM3-201ENST00000269834 BAZ1BQ9UIG0 1483 aaKnown RBP11.47□□□□□ -0.57
ZIM3-201ENST00000269834 CDK11BP21127 795 aaKnown RBP11.46□□□□□ -0.58
ZIM3-201ENST00000269834 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.58
ZIM3-201ENST00000269834 SAMD1Q6SPF0 538 aaPredicted RBP11.45□□□□□ -0.58
ZIM3-201ENST00000269834 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
ZIM3-201ENST00000269834 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
ZIM3-201ENST00000269834 RUSC2Q8N2Y8 1516 aa11.44□□□□□ -0.58
ZIM3-201ENST00000269834 DIEXFQ68CQ4 756 aaKnown RBP11.44□□□□□ -0.58
ZIM3-201ENST00000269834 P3H3Q8IVL6 736 aa11.44□□□□□ -0.58
ZIM3-201ENST00000269834 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
ZIM3-201ENST00000269834 CCDC82Q8N4S0 544 aa11.44□□□□□ -0.58
ZIM3-201ENST00000269834 ERCC6L2Q5T890 1561 aa11.44□□□□□ -0.58
ZIM3-201ENST00000269834 LMTK3Q96Q04 1460 aa11.44□□□□□ -0.58
ZIM3-201ENST00000269834 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
ZIM3-201ENST00000269834 CACNB1Q02641 598 aaPredicted RBP11.42□□□□□ -0.58
ZIM3-201ENST00000269834 RBM25P49756 843 aaKnown RBP11.41□□□□□ -0.58
ZIM3-201ENST00000269834 RGS22Q8NE09 1264 aa11.41□□□□□ -0.58
ZIM3-201ENST00000269834 U3KPZ7 1027 aaPredicted RBP11.41□□□□□ -0.58
ZIM3-201ENST00000269834 AEBP1Q8IUX7 1158 aa11.41□□□□□ -0.58
ZIM3-201ENST00000269834 ATAD2BQ9ULI0 1458 aa11.41□□□□□ -0.58
ZIM3-201ENST00000269834 NEUROD1Q13562 356 aa11.4□□□□□ -0.58
ZIM3-201ENST00000269834 VPS8Q8N3P4 1428 aa11.39□□□□□ -0.59
ZIM3-201ENST00000269834 BIVM-ERCC5R4GMW8 1640 aa11.37□□□□□ -0.59
ZIM3-201ENST00000269834 CADPS2Q86UW7 1296 aa11.37□□□□□ -0.59
ZIM3-201ENST00000269834 FBXO41Q8TF61 875 aa11.37□□□□□ -0.59
ZIM3-201ENST00000269834 TOP2BQ02880 1626 aa11.36□□□□□ -0.59
ZIM3-201ENST00000269834 HMGXB3Q12766 1538 aa11.36□□□□□ -0.59
ZIM3-201ENST00000269834 NCAPD3P42695 1498 aa11.36□□□□□ -0.59
ZIM3-201ENST00000269834 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
ZIM3-201ENST00000269834 CLIP1P30622 1438 aa11.36□□□□□ -0.59
ZIM3-201ENST00000269834 RIMBP3CA6NJZ7 1639 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms