RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 HIRIP3Q9BW71 556 aaPredicted RBP13.6□□□□□ -0.23
LAMA3-201ENST00000269217 RB1CC1Q8TDY2 1594 aa13.58□□□□□ -0.23
LAMA3-201ENST00000269217 IRX6P78412 446 aaPredicted RBP13.58□□□□□ -0.24
LAMA3-201ENST00000269217 RRP7BPQ9NSQ0 103 aa13.58□□□□□ -0.24
LAMA3-201ENST00000269217 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
LAMA3-201ENST00000269217 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
LAMA3-201ENST00000269217 CHMP7Q8WUX9 453 aaPredicted RBP13.55□□□□□ -0.24
LAMA3-201ENST00000269217 CEP164Q9UPV0 1460 aa13.54□□□□□ -0.24
LAMA3-201ENST00000269217 DDRGK1Q96HY6 314 aa13.51□□□□□ -0.25
LAMA3-201ENST00000269217 MYH16Q9H6N6 1097 aa13.51□□□□□ -0.25
LAMA3-201ENST00000269217 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
LAMA3-201ENST00000269217 GLIPR1L2Q4G1C9 344 aa13.5□□□□□ -0.25
LAMA3-201ENST00000269217 PLEKHD1A6NEE1 506 aa13.48□□□□□ -0.25
LAMA3-201ENST00000269217 BECN1Q14457 450 aa13.47□□□□□ -0.25
LAMA3-201ENST00000269217 NACADO15069 1562 aa13.47□□□□□ -0.25
LAMA3-201ENST00000269217 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
LAMA3-201ENST00000269217 CDCA8Q53HL2 280 aa13.45□□□□□ -0.26
LAMA3-201ENST00000269217 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
LAMA3-201ENST00000269217 ARXQ96QS3 562 aa13.45□□□□□ -0.26
LAMA3-201ENST00000269217 CFDP1Q9UEE9 299 aaPredicted RBP13.42□□□□□ -0.26
LAMA3-201ENST00000269217 SUPT16HQ9Y5B9 1047 aaKnown RBP13.42□□□□□ -0.26
LAMA3-201ENST00000269217 ANP32EQ9BTT0 268 aa13.42□□□□□ -0.26
LAMA3-201ENST00000269217 RGL3Q3MIN7 710 aa13.41□□□□□ -0.26
LAMA3-201ENST00000269217 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
LAMA3-201ENST00000269217 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
LAMA3-201ENST00000269217 CARD11Q9BXL7 1154 aa13.4□□□□□ -0.26
LAMA3-201ENST00000269217 KCNH8Q96L42 1107 aa13.39□□□□□ -0.27
LAMA3-201ENST00000269217 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
LAMA3-201ENST00000269217 PPP4R2Q9NY27 417 aa13.37□□□□□ -0.27
LAMA3-201ENST00000269217 GOLGA6L22H0YM25 854 aa13.36□□□□□ -0.27
LAMA3-201ENST00000269217 PPP1R15AO75807 674 aaPredicted RBP13.36□□□□□ -0.27
LAMA3-201ENST00000269217 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
LAMA3-201ENST00000269217 CCNB3Q8WWL7 1395 aa13.35□□□□□ -0.27
LAMA3-201ENST00000269217 FHAD1B1AJZ9 1412 aa13.35□□□□□ -0.27
LAMA3-201ENST00000269217 PPM1GO15355 546 aaPredicted RBP13.35□□□□□ -0.27
LAMA3-201ENST00000269217 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
LAMA3-201ENST00000269217 TRIM44Q96DX7 344 aaPredicted RBP13.33□□□□□ -0.27
LAMA3-201ENST00000269217 TIMELESSQ9UNS1 1208 aa13.33□□□□□ -0.27
LAMA3-201ENST00000269217 FTSJ3Q8IY81 847 aaKnown RBP13.31□□□□□ -0.28
LAMA3-201ENST00000269217 SENP3-EIF4A1A0A087X0R7 540 aa13.3□□□□□ -0.28
LAMA3-201ENST00000269217 CASC1Q6TDU7 716 aa13.29□□□□□ -0.28
LAMA3-201ENST00000269217 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
LAMA3-201ENST00000269217 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
LAMA3-201ENST00000269217 C14orf37Q86TY3 774 aa13.27□□□□□ -0.28
LAMA3-201ENST00000269217 CCER2I3L3R5 266 aa13.27□□□□□ -0.29
LAMA3-201ENST00000269217 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.29
LAMA3-201ENST00000269217 ZBTB7CA1YPR0 619 aa13.26□□□□□ -0.29
LAMA3-201ENST00000269217 SOGA1O94964 1423 aa13.25□□□□□ -0.29
LAMA3-201ENST00000269217 NOP58Q9Y2X3 529 aaKnown RBP13.25□□□□□ -0.29
LAMA3-201ENST00000269217 CARMIL1Q5VZK9 1371 aa13.25□□□□□ -0.29
LAMA3-201ENST00000269217 NEUROD2Q15784 382 aa13.25□□□□□ -0.29
LAMA3-201ENST00000269217 VPS8Q8N3P4 1428 aa13.24□□□□□ -0.29
LAMA3-201ENST00000269217 CECR2Q9BXF3 1484 aa13.24□□□□□ -0.29
LAMA3-201ENST00000269217 CHMP4BQ9H444 224 aaKnown RBP13.24□□□□□ -0.29
LAMA3-201ENST00000269217 MS4A1P11836 297 aa13.24□□□□□ -0.29
LAMA3-201ENST00000269217 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
LAMA3-201ENST00000269217 RGS3P49796 1198 aa13.23□□□□□ -0.29
LAMA3-201ENST00000269217 TMF1P82094 1093 aa13.22□□□□□ -0.29
LAMA3-201ENST00000269217 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
LAMA3-201ENST00000269217 CUX2O14529 1486 aa13.22□□□□□ -0.29
LAMA3-201ENST00000269217 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
LAMA3-201ENST00000269217 FRAT1Q92837 279 aaPredicted RBP13.21□□□□□ -0.29
LAMA3-201ENST00000269217 B4GALNT3Q6L9W6 998 aa13.21□□□□□ -0.3
LAMA3-201ENST00000269217 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
LAMA3-201ENST00000269217 ARHGAP35Q9NRY4 1499 aa13.2□□□□□ -0.3
LAMA3-201ENST00000269217 PTMAP06454 111 aaKnown RBP13.2□□□□□ -0.3
LAMA3-201ENST00000269217 POGKQ9P215 609 aa13.2□□□□□ -0.3
LAMA3-201ENST00000269217 DCAF11Q8TEB1 546 aa13.19□□□□□ -0.3
LAMA3-201ENST00000269217 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
LAMA3-201ENST00000269217 CDK11BP21127 795 aaKnown RBP13.19□□□□□ -0.3
LAMA3-201ENST00000269217 A0A0G2JS52 829 aa13.18□□□□□ -0.3
LAMA3-201ENST00000269217 ZRSR1Q15695 479 aaKnown RBP13.17□□□□□ -0.3
LAMA3-201ENST00000269217 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
LAMA3-201ENST00000269217 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
LAMA3-201ENST00000269217 HSPA5P11021 654 aaKnown RBP13.16□□□□□ -0.3
LAMA3-201ENST00000269217 TNNT2P45379 298 aaPredicted RBP13.16□□□□□ -0.3
LAMA3-201ENST00000269217 KANK1Q14678 1352 aa13.15□□□□□ -0.3
LAMA3-201ENST00000269217 U2SURPO15042 1029 aaKnown RBP13.15□□□□□ -0.31
LAMA3-201ENST00000269217 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
LAMA3-201ENST00000269217 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
LAMA3-201ENST00000269217 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
LAMA3-201ENST00000269217 CCDC88BA6NC98 1476 aa13.13□□□□□ -0.31
LAMA3-201ENST00000269217 DNTTIP2Q5QJE6 756 aaKnown RBP13.12□□□□□ -0.31
LAMA3-201ENST00000269217 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
LAMA3-201ENST00000269217 KANK4Q5T7N3 995 aaPredicted RBP13.11□□□□□ -0.31
LAMA3-201ENST00000269217 KTN1Q86UP2 1357 aaKnown RBP13.11□□□□□ -0.31
LAMA3-201ENST00000269217 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
LAMA3-201ENST00000269217 RAB3GAP2Q9H2M9 1393 aa13.1□□□□□ -0.31
LAMA3-201ENST00000269217 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
LAMA3-201ENST00000269217 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
LAMA3-201ENST00000269217 HSCBQ8IWL3 235 aa13.09□□□□□ -0.31
LAMA3-201ENST00000269217 PKD2Q13563 968 aa13.08□□□□□ -0.31
LAMA3-201ENST00000269217 MORC1Q86VD1 984 aa13.08□□□□□ -0.31
LAMA3-201ENST00000269217 NAP1L5Q96NT1 182 aaPredicted RBP13.08□□□□□ -0.32
LAMA3-201ENST00000269217 FMN1Q68DA7 1419 aa13.07□□□□□ -0.32
LAMA3-201ENST00000269217 OS9Q13438 667 aaPredicted RBP13.07□□□□□ -0.32
LAMA3-201ENST00000269217 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
LAMA3-201ENST00000269217 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
LAMA3-201ENST00000269217 RALBP1Q15311 655 aa13.06□□□□□ -0.32
LAMA3-201ENST00000269217 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms