RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 CCNB3Q8WWL7 1395 aa19.89■□□□□ 0.78
PDPK1-201ENST00000268673 NPM1P06748 294 aaKnown RBP eCLIP19.87■□□□□ 0.77
PDPK1-201ENST00000268673 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
PDPK1-201ENST00000268673 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
PDPK1-201ENST00000268673 NOP58Q9Y2X3 529 aaKnown RBP19.85■□□□□ 0.77
PDPK1-201ENST00000268673 SIN3AQ96ST3 1273 aa19.85■□□□□ 0.77
PDPK1-201ENST00000268673 WIZO95785 1651 aa19.85■□□□□ 0.77
PDPK1-201ENST00000268673 MTUS2Q5JR59 1369 aa19.82■□□□□ 0.76
PDPK1-201ENST00000268673 CHMP7Q8WUX9 453 aaPredicted RBP19.82■□□□□ 0.76
PDPK1-201ENST00000268673 ERICH6BQ5W0A0 696 aa19.82■□□□□ 0.76
PDPK1-201ENST00000268673 CANXP27824 592 aaKnown RBP19.81■□□□□ 0.76
PDPK1-201ENST00000268673 CHGAP10645 457 aaKnown RBP19.8■□□□□ 0.76
PDPK1-201ENST00000268673 ESF1Q9H501 851 aaKnown RBP19.79■□□□□ 0.76
PDPK1-201ENST00000268673 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
PDPK1-201ENST00000268673 GLIPR1L2Q4G1C9 344 aa19.78■□□□□ 0.76
PDPK1-201ENST00000268673 NEFMP07197 916 aa19.78■□□□□ 0.76
PDPK1-201ENST00000268673 DEKP35659 375 aaKnown RBP19.77■□□□□ 0.76
PDPK1-201ENST00000268673 DDRGK1Q96HY6 314 aa19.77■□□□□ 0.76
PDPK1-201ENST00000268673 TSPY4P0CV99 314 aa19.76■□□□□ 0.75
PDPK1-201ENST00000268673 TSPY10P0CW01 314 aa19.76■□□□□ 0.75
PDPK1-201ENST00000268673 KIF27Q86VH2 1401 aa19.75■□□□□ 0.75
PDPK1-201ENST00000268673 PPM1GO15355 546 aaPredicted RBP19.74■□□□□ 0.75
PDPK1-201ENST00000268673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.73■□□□□ 0.751e-9■■■□□ 16.9
PDPK1-201ENST00000268673 SALL2Q9Y467 1007 aaPredicted RBP19.73■□□□□ 0.75
PDPK1-201ENST00000268673 SLC24A1O60721 1099 aa19.72■□□□□ 0.75
PDPK1-201ENST00000268673 B4GALNT3Q6L9W6 998 aa19.71■□□□□ 0.75
PDPK1-201ENST00000268673 SETD5Q9C0A6 1442 aa19.71■□□□□ 0.75
PDPK1-201ENST00000268673 UPF2Q9HAU5 1272 aaKnown RBP19.71■□□□□ 0.75
PDPK1-201ENST00000268673 STAG3Q9UJ98 1225 aa19.71■□□□□ 0.75
PDPK1-201ENST00000268673 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.7■□□□□ 0.74
PDPK1-201ENST00000268673 DHX57Q6P158 1386 aaKnown RBP19.68■□□□□ 0.74
PDPK1-201ENST00000268673 KANK4Q5T7N3 995 aaPredicted RBP19.67■□□□□ 0.74
PDPK1-201ENST00000268673 TOP2AP11388 1531 aaKnown RBP19.67■□□□□ 0.74
PDPK1-201ENST00000268673 RRP7BPQ9NSQ0 103 aa19.65■□□□□ 0.74
PDPK1-201ENST00000268673 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
PDPK1-201ENST00000268673 RAB3GAP2Q9H2M9 1393 aa19.64■□□□□ 0.73
PDPK1-201ENST00000268673 KDM2AQ9Y2K7 1162 aa19.6■□□□□ 0.73
PDPK1-201ENST00000268673 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
PDPK1-201ENST00000268673 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
PDPK1-201ENST00000268673 ANP32BQ92688 251 aaKnown RBP19.59■□□□□ 0.73
PDPK1-201ENST00000268673 PPP1R15AO75807 674 aaPredicted RBP19.57■□□□□ 0.72
PDPK1-201ENST00000268673 PLEKHD1A6NEE1 506 aa19.56■□□□□ 0.72
PDPK1-201ENST00000268673 KCNH8Q96L42 1107 aa19.56■□□□□ 0.72
PDPK1-201ENST00000268673 LAS1LQ9Y4W2 734 aaKnown RBP19.56■□□□□ 0.72
PDPK1-201ENST00000268673 FANCIQ9NVI1 1328 aa19.54■□□□□ 0.72
PDPK1-201ENST00000268673 WDR43Q15061 677 aaKnown RBP eCLIP19.53■□□□□ 0.72
PDPK1-201ENST00000268673 RTN4Q9NQC3 1192 aaKnown RBP19.53■□□□□ 0.72
PDPK1-201ENST00000268673 SMARCA4P51532 1647 aa19.53■□□□□ 0.72
PDPK1-201ENST00000268673 BECN1Q14457 450 aa19.51■□□□□ 0.71
PDPK1-201ENST00000268673 HSPA5P11021 654 aaKnown RBP19.49■□□□□ 0.71
PDPK1-201ENST00000268673 HSP90AA1P07900 732 aaKnown RBP19.48■□□□□ 0.71
PDPK1-201ENST00000268673 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
PDPK1-201ENST00000268673 IPO9Q96P70 1041 aaKnown RBP19.44■□□□□ 0.7
PDPK1-201ENST00000268673 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
PDPK1-201ENST00000268673 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
PDPK1-201ENST00000268673 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
PDPK1-201ENST00000268673 CFDP1Q9UEE9 299 aaPredicted RBP19.42■□□□□ 0.7
PDPK1-201ENST00000268673 ARXQ96QS3 562 aa19.42■□□□□ 0.7
PDPK1-201ENST00000268673 SENP3-EIF4A1A0A087X0R7 540 aa19.41■□□□□ 0.7
PDPK1-201ENST00000268673 CARMIL1Q5VZK9 1371 aa19.39■□□□□ 0.69
PDPK1-201ENST00000268673 TCERG1O14776 1098 aaKnown RBP19.38■□□□□ 0.69
PDPK1-201ENST00000268673 CARD11Q9BXL7 1154 aa19.37■□□□□ 0.69
PDPK1-201ENST00000268673 RGL3Q3MIN7 710 aa19.36■□□□□ 0.69
PDPK1-201ENST00000268673 NUDCQ9Y266 331 aa19.33■□□□□ 0.69
PDPK1-201ENST00000268673 CUX2O14529 1486 aa19.32■□□□□ 0.68
PDPK1-201ENST00000268673 TRIM44Q96DX7 344 aaPredicted RBP19.3■□□□□ 0.68
PDPK1-201ENST00000268673 USP35Q9P2H5 1018 aa19.29■□□□□ 0.68
PDPK1-201ENST00000268673 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
PDPK1-201ENST00000268673 ERCC6Q03468 1493 aa19.26■□□□□ 0.67
PDPK1-201ENST00000268673 RGS3P49796 1198 aa19.26■□□□□ 0.67
PDPK1-201ENST00000268673 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
PDPK1-201ENST00000268673 ZBED9Q6R2W3 1325 aa19.25■□□□□ 0.67
PDPK1-201ENST00000268673 RCAN3Q9UKA8 241 aa19.25■□□□□ 0.67
PDPK1-201ENST00000268673 L1TD1Q5T7N2 865 aaKnown RBP19.22■□□□□ 0.67
PDPK1-201ENST00000268673 NAP1L5Q96NT1 182 aaPredicted RBP19.22■□□□□ 0.67
PDPK1-201ENST00000268673 KNSTRNQ9Y448 316 aa19.22■□□□□ 0.67
PDPK1-201ENST00000268673 KIF21BO75037 1637 aa19.2■□□□□ 0.66
PDPK1-201ENST00000268673 CDCA8Q53HL2 280 aa19.2■□□□□ 0.66
PDPK1-201ENST00000268673 PRKRIP1Q9H875 184 aaPredicted RBP19.2■□□□□ 0.66
PDPK1-201ENST00000268673 MPHOSPH9Q99550 1183 aa19.19■□□□□ 0.66
PDPK1-201ENST00000268673 GOLGA6L22H0YM25 854 aa19.18■□□□□ 0.66
PDPK1-201ENST00000268673 RALBP1Q15311 655 aa19.17■□□□□ 0.66
PDPK1-201ENST00000268673 L3MBTL2Q969R5 705 aa19.17■□□□□ 0.66
PDPK1-201ENST00000268673 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
PDPK1-201ENST00000268673 EIF4G1Q04637 1599 aaKnown RBP19.14■□□□□ 0.65
PDPK1-201ENST00000268673 PDE3BQ13370 1112 aa19.13■□□□□ 0.65
PDPK1-201ENST00000268673 RRBP1Q9P2E9 1410 aaKnown RBP19.13■□□□□ 0.65
PDPK1-201ENST00000268673 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.12■□□□□ 0.65
PDPK1-201ENST00000268673 CC2D1BQ5T0F9 858 aaKnown RBP19.12■□□□□ 0.65
PDPK1-201ENST00000268673 KTN1Q86UP2 1357 aaKnown RBP19.11■□□□□ 0.65
PDPK1-201ENST00000268673 ARID4BQ4LE39 1312 aaPredicted RBP19.11■□□□□ 0.65
PDPK1-201ENST00000268673 FOXD1Q16676 465 aa19.1■□□□□ 0.65
PDPK1-201ENST00000268673 PDE4AP27815 886 aa19.09■□□□□ 0.65
PDPK1-201ENST00000268673 ROCK2O75116 1388 aaKnown RBP19.08■□□□□ 0.65
PDPK1-201ENST00000268673 DCAF11Q8TEB1 546 aa19.06■□□□□ 0.64
PDPK1-201ENST00000268673 CCDC18Q5T9S5 1454 aa19.06■□□□□ 0.64
PDPK1-201ENST00000268673 PLEKHG5O94827 1062 aa19.06■□□□□ 0.64
PDPK1-201ENST00000268673 C14orf37Q86TY3 774 aa19.06■□□□□ 0.64
PDPK1-201ENST00000268673 MS4A1P11836 297 aa19.05■□□□□ 0.64
PDPK1-201ENST00000268673 TMF1P82094 1093 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms