RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 RRP9O43818 475 aaKnown RBP9.12□□□□□ -0.95
CNTN3-201ENST00000263665 UBTFP17480 764 aaKnown RBP9.11□□□□□ -0.95
CNTN3-201ENST00000263665 MAP7D2Q96T17 732 aa9.1□□□□□ -0.95
CNTN3-201ENST00000263665 APPP05067 770 aa9.1□□□□□ -0.95
CNTN3-201ENST00000263665 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
CNTN3-201ENST00000263665 MTERF4Q7Z6M4 381 aaKnown RBP9.07□□□□□ -0.96
CNTN3-201ENST00000263665 CALRP27797 417 aaKnown RBP9.07□□□□□ -0.96
CNTN3-201ENST00000263665 PPP4R2Q9NY27 417 aa9.06□□□□□ -0.96
CNTN3-201ENST00000263665 TNNT3P45378 269 aaPredicted RBP9.05□□□□□ -0.96
CNTN3-201ENST00000263665 BECN1Q14457 450 aa9.05□□□□□ -0.96
CNTN3-201ENST00000263665 DNTTIP2Q5QJE6 756 aaKnown RBP9.04□□□□□ -0.96
CNTN3-201ENST00000263665 C14orf37Q86TY3 774 aa9.04□□□□□ -0.96
CNTN3-201ENST00000263665 TAF3Q5VWG9 929 aa9.04□□□□□ -0.96
CNTN3-201ENST00000263665 FAM43AQ8N2R8 423 aa9.04□□□□□ -0.96
CNTN3-201ENST00000263665 UPF2Q9HAU5 1272 aaKnown RBP9.03□□□□□ -0.96
CNTN3-201ENST00000263665 ZMYND15Q9H091 742 aa9.03□□□□□ -0.96
CNTN3-201ENST00000263665 HNRNPUL2Q1KMD3 747 aaKnown RBP9.02□□□□□ -0.96
CNTN3-201ENST00000263665 HSP90B1P14625 803 aaKnown RBP9.02□□□□□ -0.97
CNTN3-201ENST00000263665 ITGAEP38570 1179 aa9.01□□□□□ -0.97
CNTN3-201ENST00000263665 PTMAP06454 111 aaKnown RBP9.01□□□□□ -0.97
CNTN3-201ENST00000263665 TPM2P07951 284 aa9.01□□□□□ -0.97
CNTN3-201ENST00000263665 TIMELESSQ9UNS1 1208 aa9.01□□□□□ -0.97
CNTN3-201ENST00000263665 BRD2P25440 801 aaKnown RBP9.01□□□□□ -0.97
CNTN3-201ENST00000263665 IPO9Q96P70 1041 aaKnown RBP9□□□□□ -0.97
CNTN3-201ENST00000263665 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
CNTN3-201ENST00000263665 MSNP26038 577 aaKnown RBP8.99□□□□□ -0.97
CNTN3-201ENST00000263665 ZCCHC6Q5VYS8 1495 aaKnown RBP8.98□□□□□ -0.97
CNTN3-201ENST00000263665 CCER2I3L3R5 266 aa8.98□□□□□ -0.97
CNTN3-201ENST00000263665 GSE1Q14687 1217 aa8.98□□□□□ -0.97
CNTN3-201ENST00000263665 GOLGA6L3A6NEY3 463 aa8.97□□□□□ -0.97
CNTN3-201ENST00000263665 TULP1O00294 542 aaPredicted RBP8.95□□□□□ -0.98
CNTN3-201ENST00000263665 EEA1Q15075 1411 aa8.95□□□□□ -0.98
CNTN3-201ENST00000263665 AMER1Q5JTC6 1135 aaPredicted RBP8.94□□□□□ -0.98
CNTN3-201ENST00000263665 RBM10P98175 930 aaKnown RBP8.93□□□□□ -0.98
CNTN3-201ENST00000263665 GOLGA6L22H0YM25 854 aa8.93□□□□□ -0.98
CNTN3-201ENST00000263665 CHAF1AQ13111 956 aaPredicted RBP8.93□□□□□ -0.98
CNTN3-201ENST00000263665 HNRNPUQ00839 825 aaKnown RBP eCLIP8.92□□□□□ -0.98
CNTN3-201ENST00000263665 GOLGA6L6A8MZA4 724 aa8.91□□□□□ -0.98
CNTN3-201ENST00000263665 FGD1P98174 961 aa8.91□□□□□ -0.98
CNTN3-201ENST00000263665 TSPYL1Q9H0U9 437 aa8.89□□□□□ -0.99
CNTN3-201ENST00000263665 CCDC66A2RUB6 948 aa8.89□□□□□ -0.99
CNTN3-201ENST00000263665 IL27Q8NEV9 243 aa8.88□□□□□ -0.99
CNTN3-201ENST00000263665 BBXQ8WY36 941 aaPredicted RBP8.88□□□□□ -0.99
CNTN3-201ENST00000263665 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.87□□□□□ -0.99
CNTN3-201ENST00000263665 GOLGA6L1Q8N7Z2 621 aa8.87□□□□□ -0.99
CNTN3-201ENST00000263665 CCDC9Q9Y3X0 531 aaKnown RBP8.86□□□□□ -0.99
CNTN3-201ENST00000263665 BCL11BQ9C0K0 894 aaPredicted RBP8.86□□□□□ -0.99
CNTN3-201ENST00000263665 AXDND1Q5T1B0 1012 aaPredicted RBP8.85□□□□□ -0.99
CNTN3-201ENST00000263665 PDCL3Q9H2J4 239 aa8.85□□□□□ -0.99
CNTN3-201ENST00000263665 PATL2C9JE40 543 aaKnown RBP8.84□□□□□ -0.99
CNTN3-201ENST00000263665 WRNQ14191 1432 aaPredicted RBP eCLIP8.84□□□□□ -0.99
CNTN3-201ENST00000263665 BCCIPQ9P287 314 aaKnown RBP eCLIP8.84□□□□□ -0.99
CNTN3-201ENST00000263665 TCERG1O14776 1098 aaKnown RBP8.84□□□□□ -0.99
CNTN3-201ENST00000263665 NAP1L2Q9ULW6 460 aaPredicted RBP8.84□□□□□ -0.99
CNTN3-201ENST00000263665 CSPP1Q1MSJ5 1256 aa8.83□□□□□ -1
CNTN3-201ENST00000263665 IRX3P78415 501 aaPredicted RBP8.83□□□□□ -1
CNTN3-201ENST00000263665 FBXO3Q9UK99 471 aa8.83□□□□□ -1
CNTN3-201ENST00000263665 ZNF771Q7L3S4 317 aaPredicted RBP8.83□□□□□ -1
CNTN3-201ENST00000263665 CALD1Q05682 793 aaKnown RBP8.82□□□□□ -1
CNTN3-201ENST00000263665 TRIM52Q96A61 297 aa8.81□□□□□ -1
CNTN3-201ENST00000263665 KLHL34Q8N239 644 aa8.81□□□□□ -1
CNTN3-201ENST00000263665 CLGNO14967 610 aa8.81□□□□□ -1
CNTN3-201ENST00000263665 PAXIP1Q6ZW49 1069 aaPredicted RBP8.81□□□□□ -1
CNTN3-201ENST00000263665 TNIKQ9UKE5 1360 aa8.81□□□□□ -1
CNTN3-201ENST00000263665 SETQ01105 290 aaPredicted RBP8.8□□□□□ -1
CNTN3-201ENST00000263665 MYH16Q9H6N6 1097 aa8.8□□□□□ -1
CNTN3-201ENST00000263665 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.8□□□□□ -1
CNTN3-201ENST00000263665 NOM1Q5C9Z4 860 aaKnown RBP8.79□□□□□ -1
CNTN3-201ENST00000263665 CC2D1BQ5T0F9 858 aaKnown RBP8.79□□□□□ -1
CNTN3-201ENST00000263665 IPO4Q8TEX9 1081 aaKnown RBP8.78□□□□□ -1
CNTN3-201ENST00000263665 CEP162Q5TB80 1403 aa8.78□□□□□ -1
CNTN3-201ENST00000263665 DDX10Q13206 875 aaKnown RBP8.78□□□□□ -1
CNTN3-201ENST00000263665 C11orf95C9JLR9 678 aaPredicted RBP8.77□□□□□ -1
CNTN3-201ENST00000263665 TONSLQ96HA7 1378 aa8.77□□□□□ -1.01
CNTN3-201ENST00000263665 AAMPQ13685 434 aa8.77□□□□□ -1.01
CNTN3-201ENST00000263665 KIAA2012Q0VF49 1180 aa8.76□□□□□ -1.01
CNTN3-201ENST00000263665 IRX6P78412 446 aaPredicted RBP8.76□□□□□ -1.01
CNTN3-201ENST00000263665 GOLGA3Q08378 1498 aa8.75□□□□□ -1.01
CNTN3-201ENST00000263665 FTSJ3Q8IY81 847 aaKnown RBP8.75□□□□□ -1.01
CNTN3-201ENST00000263665 FAM13BQ9NYF5 915 aa8.74□□□□□ -1.01
CNTN3-201ENST00000263665 DNAJC2Q99543 621 aaKnown RBP8.74□□□□□ -1.01
CNTN3-201ENST00000263665 BRPF3Q9ULD4 1205 aa8.74□□□□□ -1.01
CNTN3-201ENST00000263665 ISY1Q9ULR0 285 aaKnown RBP8.73□□□□□ -1.01
CNTN3-201ENST00000263665 SSR1P43307 286 aaKnown RBP8.72□□□□□ -1.01
CNTN3-201ENST00000263665 MS4A1P11836 297 aa8.71□□□□□ -1.01
CNTN3-201ENST00000263665 CLSTN1O94985 981 aa8.71□□□□□ -1.01
CNTN3-201ENST00000263665 CWC15Q9P013 229 aaKnown RBP8.71□□□□□ -1.01
CNTN3-201ENST00000263665 SMAP1Q8IYB5 467 aaPredicted RBP8.71□□□□□ -1.02
CNTN3-201ENST00000263665 GBP4Q96PP9 640 aa8.71□□□□□ -1.02
CNTN3-201ENST00000263665 PLCD4Q9BRC7 762 aa8.71□□□□□ -1.02
CNTN3-201ENST00000263665 LETM1O95202 739 aaPredicted RBP8.7□□□□□ -1.02
CNTN3-201ENST00000263665 DDX11L8A8MPP1 907 aa8.7□□□□□ -1.02
CNTN3-201ENST00000263665 TEX35Q5T0J7 233 aa8.7□□□□□ -1.02
CNTN3-201ENST00000263665 RB1CC1Q8TDY2 1594 aa8.7□□□□□ -1.02
CNTN3-201ENST00000263665 ARID3AQ99856 593 aa8.7□□□□□ -1.02
CNTN3-201ENST00000263665 ATP1B4Q9UN42 357 aaPredicted RBP8.7□□□□□ -1.02
CNTN3-201ENST00000263665 ZNF622Q969S3 477 aaKnown RBP eCLIP8.7□□□□□ -1.02
CNTN3-201ENST00000263665 B4GALNT3Q6L9W6 998 aa8.69□□□□□ -1.02
CNTN3-201ENST00000263665 MRE11P49959 708 aa8.69□□□□□ -1.02
CNTN3-201ENST00000263665 RBM28Q9NW13 759 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms