RNA–Protein interactions for RNA: ENST00000263238.6

ACTR3-201, Transcript of ARP3 actin related protein 3 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTR3, Length 6,718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3-201ENST00000263238 ABCC9O60706 1549 aa17.56■□□□□ 0.4
ACTR3-201ENST00000263238 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
ACTR3-201ENST00000263238 ERICH6BQ5W0A0 696 aa17.53■□□□□ 0.4
ACTR3-201ENST00000263238 KDM2AQ9Y2K7 1162 aa17.53■□□□□ 0.4
ACTR3-201ENST00000263238 CEP162Q5TB80 1403 aa17.53■□□□□ 0.4
ACTR3-201ENST00000263238 BECN1Q14457 450 aa17.53■□□□□ 0.4
ACTR3-201ENST00000263238 ARID4BQ4LE39 1312 aaPredicted RBP17.52■□□□□ 0.4
ACTR3-201ENST00000263238 WDR43Q15061 677 aaKnown RBP eCLIP17.52■□□□□ 0.4
ACTR3-201ENST00000263238 NCLP19338 710 aaKnown RBP17.49■□□□□ 0.39
ACTR3-201ENST00000263238 EIF4G2P78344 907 aaKnown RBP eCLIP17.49■□□□□ 0.39
ACTR3-201ENST00000263238 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
ACTR3-201ENST00000263238 TPRNQ4KMQ1 711 aa17.47■□□□□ 0.39
ACTR3-201ENST00000263238 CLIP1P30622 1438 aa17.47■□□□□ 0.39
ACTR3-201ENST00000263238 FBLN2P98095 1184 aa17.45■□□□□ 0.38
ACTR3-201ENST00000263238 ZCCHC6Q5VYS8 1495 aaKnown RBP17.45■□□□□ 0.38
ACTR3-201ENST00000263238 RGS3P49796 1198 aa17.43■□□□□ 0.38
ACTR3-201ENST00000263238 AMER1Q5JTC6 1135 aaPredicted RBP17.41■□□□□ 0.38
ACTR3-201ENST00000263238 RRP7BPQ9NSQ0 103 aa17.4■□□□□ 0.38
ACTR3-201ENST00000263238 DNTTIP2Q5QJE6 756 aaKnown RBP17.4■□□□□ 0.38
ACTR3-201ENST00000263238 TNNT2P45379 298 aaPredicted RBP17.4■□□□□ 0.38
ACTR3-201ENST00000263238 PTMAP06454 111 aaKnown RBP17.37■□□□□ 0.37
ACTR3-201ENST00000263238 SPRYD3Q8NCJ5 442 aa17.36■□□□□ 0.37
ACTR3-201ENST00000263238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.34■□□□□ 0.37
ACTR3-201ENST00000263238 ARID3AQ99856 593 aa17.34■□□□□ 0.37
ACTR3-201ENST00000263238 CHGAP10645 457 aaKnown RBP17.33■□□□□ 0.36
ACTR3-201ENST00000263238 GOLGA6L22H0YM25 854 aa17.31■□□□□ 0.36
ACTR3-201ENST00000263238 ZBTB7CA1YPR0 619 aa17.3■□□□□ 0.36
ACTR3-201ENST00000263238 GOLGA3Q08378 1498 aa17.29■□□□□ 0.36
ACTR3-201ENST00000263238 KCNH8Q96L42 1107 aa17.29■□□□□ 0.36
ACTR3-201ENST00000263238 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
ACTR3-201ENST00000263238 GZF1Q9H116 711 aaPredicted RBP17.23■□□□□ 0.35
ACTR3-201ENST00000263238 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
ACTR3-201ENST00000263238 MYH16Q9H6N6 1097 aa17.22■□□□□ 0.35
ACTR3-201ENST00000263238 PLCB2Q00722 1185 aa17.22■□□□□ 0.35
ACTR3-201ENST00000263238 L1TD1Q5T7N2 865 aaKnown RBP17.2■□□□□ 0.34
ACTR3-201ENST00000263238 IPO9Q96P70 1041 aaKnown RBP17.19■□□□□ 0.34
ACTR3-201ENST00000263238 CCER2I3L3R5 266 aa17.19■□□□□ 0.34
ACTR3-201ENST00000263238 HSP90AB1P08238 724 aaKnown RBP17.19■□□□□ 0.34
ACTR3-201ENST00000263238 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
ACTR3-201ENST00000263238 NEUROD2Q15784 382 aa17.19■□□□□ 0.34
ACTR3-201ENST00000263238 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
ACTR3-201ENST00000263238 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
ACTR3-201ENST00000263238 CDK11BP21127 795 aaKnown RBP17.18■□□□□ 0.34
ACTR3-201ENST00000263238 MSNP26038 577 aaKnown RBP17.16■□□□□ 0.34
ACTR3-201ENST00000263238 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
ACTR3-201ENST00000263238 FTSJ3Q8IY81 847 aaKnown RBP17.15■□□□□ 0.34
ACTR3-201ENST00000263238 SLKQ9H2G2 1235 aaPredicted RBP17.14■□□□□ 0.33
ACTR3-201ENST00000263238 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
ACTR3-201ENST00000263238 CARD11Q9BXL7 1154 aa17.11■□□□□ 0.33
ACTR3-201ENST00000263238 TIMELESSQ9UNS1 1208 aa17.1■□□□□ 0.33
ACTR3-201ENST00000263238 PNNQ9H307 717 aaKnown RBP17.1■□□□□ 0.33
ACTR3-201ENST00000263238 HSPA5P11021 654 aaKnown RBP17.08■□□□□ 0.32
ACTR3-201ENST00000263238 HSCBQ8IWL3 235 aa17.07■□□□□ 0.32
ACTR3-201ENST00000263238 VSIG10Q8N0Z9 540 aa17.06■□□□□ 0.32
ACTR3-201ENST00000263238 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
ACTR3-201ENST00000263238 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
ACTR3-201ENST00000263238 CCNB3Q8WWL7 1395 aa17.03■□□□□ 0.32
ACTR3-201ENST00000263238 ANO8Q9HCE9 1232 aaPredicted RBP17.03■□□□□ 0.32
ACTR3-201ENST00000263238 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
ACTR3-201ENST00000263238 CASC1Q6TDU7 716 aa17.02■□□□□ 0.32
ACTR3-201ENST00000263238 EEA1Q15075 1411 aa17.01■□□□□ 0.31
ACTR3-201ENST00000263238 TCERG1O14776 1098 aaKnown RBP17.01■□□□□ 0.31
ACTR3-201ENST00000263238 HSP90AA2PQ14568 343 aaPredicted RBP17.01■□□□□ 0.31
ACTR3-201ENST00000263238 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
ACTR3-201ENST00000263238 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
ACTR3-201ENST00000263238 GOLGA6L3A6NEY3 463 aa16.99■□□□□ 0.31
ACTR3-201ENST00000263238 RCAN3Q9UKA8 241 aa16.99■□□□□ 0.31
ACTR3-201ENST00000263238 SOGA1O94964 1423 aa16.99■□□□□ 0.31
ACTR3-201ENST00000263238 TSPY4P0CV99 314 aa16.99■□□□□ 0.31
ACTR3-201ENST00000263238 TSPY10P0CW01 314 aa16.99■□□□□ 0.31
ACTR3-201ENST00000263238 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
ACTR3-201ENST00000263238 RSPH6AQ9H0K4 717 aa16.96■□□□□ 0.31
ACTR3-201ENST00000263238 FANCIQ9NVI1 1328 aa16.96■□□□□ 0.3
ACTR3-201ENST00000263238 FOXD1Q16676 465 aa16.95■□□□□ 0.3
ACTR3-201ENST00000263238 KANK4Q5T7N3 995 aaPredicted RBP16.95■□□□□ 0.3
ACTR3-201ENST00000263238 CHAF1AQ13111 956 aaPredicted RBP16.94■□□□□ 0.3
ACTR3-201ENST00000263238 GSE1Q14687 1217 aa16.94■□□□□ 0.3
ACTR3-201ENST00000263238 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
ACTR3-201ENST00000263238 ZRSR1Q15695 479 aaKnown RBP16.93■□□□□ 0.3
ACTR3-201ENST00000263238 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
ACTR3-201ENST00000263238 SETD5Q9C0A6 1442 aa16.93■□□□□ 0.3
ACTR3-201ENST00000263238 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
ACTR3-201ENST00000263238 NUDCQ9Y266 331 aa16.92■□□□□ 0.3
ACTR3-201ENST00000263238 RB1CC1Q8TDY2 1594 aa16.91■□□□□ 0.3
ACTR3-201ENST00000263238 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
ACTR3-201ENST00000263238 DRC7Q8IY82 874 aa16.9■□□□□ 0.3
ACTR3-201ENST00000263238 PLEKHG5O94827 1062 aa16.89■□□□□ 0.29
ACTR3-201ENST00000263238 CFAP53Q96M91 514 aa16.89■□□□□ 0.29
ACTR3-201ENST00000263238 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
ACTR3-201ENST00000263238 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
ACTR3-201ENST00000263238 PDE4AP27815 886 aa16.87■□□□□ 0.29
ACTR3-201ENST00000263238 IL27Q8NEV9 243 aa16.86■□□□□ 0.29
ACTR3-201ENST00000263238 GBP4Q96PP9 640 aa16.85■□□□□ 0.29
ACTR3-201ENST00000263238 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
ACTR3-201ENST00000263238 USP35Q9P2H5 1018 aa16.84■□□□□ 0.29
ACTR3-201ENST00000263238 DCAF11Q8TEB1 546 aa16.84■□□□□ 0.29
ACTR3-201ENST00000263238 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.29
ACTR3-201ENST00000263238 PLIN1O60240 522 aa16.83■□□□□ 0.28
ACTR3-201ENST00000263238 U2SURPO15042 1029 aaKnown RBP16.82■□□□□ 0.28
ACTR3-201ENST00000263238 APBB1O00213 710 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms