RNA–Protein interactions for RNA: ENST00000262585.6

DENND3-201, Transcript of DENN domain containing 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene DENND3, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-201ENST00000262585 CARMIL1Q5VZK9 1371 aa22.67■■□□□ 1.22
DENND3-201ENST00000262585 EIF4G2P78344 907 aaKnown RBP eCLIP22.67■■□□□ 1.22
DENND3-201ENST00000262585 IRX6P78412 446 aaPredicted RBP22.65■■□□□ 1.22
DENND3-201ENST00000262585 VPS8Q8N3P4 1428 aa22.65■■□□□ 1.22
DENND3-201ENST00000262585 CCNB3Q8WWL7 1395 aa22.65■■□□□ 1.22
DENND3-201ENST00000262585 TMC1Q8TDI8 760 aa22.64■■□□□ 1.21
DENND3-201ENST00000262585 CANXP27824 592 aaKnown RBP22.62■■□□□ 1.21
DENND3-201ENST00000262585 TOP2AP11388 1531 aaKnown RBP22.6■■□□□ 1.21
DENND3-201ENST00000262585 BCL11AQ9H165 835 aa22.56■■□□□ 1.2
DENND3-201ENST00000262585 PLEKHD1A6NEE1 506 aa22.56■■□□□ 1.2
DENND3-201ENST00000262585 KCNH8Q96L42 1107 aa22.56■■□□□ 1.2
DENND3-201ENST00000262585 NPM2Q86SE8 214 aaKnown RBP22.55■■□□□ 1.2
DENND3-201ENST00000262585 SENP3-EIF4A1A0A087X0R7 540 aa22.54■■□□□ 1.2
DENND3-201ENST00000262585 CFDP1Q9UEE9 299 aaPredicted RBP22.54■■□□□ 1.2
DENND3-201ENST00000262585 RUSC2Q8N2Y8 1516 aa22.54■■□□□ 1.2
DENND3-201ENST00000262585 RGL3Q3MIN7 710 aa22.5■■□□□ 1.19
DENND3-201ENST00000262585 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
DENND3-201ENST00000262585 NPM1P06748 294 aaKnown RBP eCLIP22.48■■□□□ 1.19
DENND3-201ENST00000262585 ANP32AP39687 249 aaKnown RBP22.48■■□□□ 1.19
DENND3-201ENST00000262585 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
DENND3-201ENST00000262585 CCDC136Q96JN2 1154 aa22.44■■□□□ 1.18
DENND3-201ENST00000262585 RAPGEF2Q9Y4G8 1499 aa22.42■■□□□ 1.18
DENND3-201ENST00000262585 NEFMP07197 916 aa22.41■■□□□ 1.18
DENND3-201ENST00000262585 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
DENND3-201ENST00000262585 SMARCA4P51532 1647 aa22.39■■□□□ 1.18
DENND3-201ENST00000262585 TDRD9Q8NDG6 1382 aaKnown RBP22.38■■□□□ 1.17
DENND3-201ENST00000262585 SLC24A1O60721 1099 aa22.37■■□□□ 1.17
DENND3-201ENST00000262585 STAG3Q9UJ98 1225 aa22.37■■□□□ 1.17
DENND3-201ENST00000262585 SETD5Q9C0A6 1442 aa22.36■■□□□ 1.17
DENND3-201ENST00000262585 SENP3Q9H4L4 574 aaPredicted RBP22.36■■□□□ 1.17
DENND3-201ENST00000262585 SUPT16HQ9Y5B9 1047 aaKnown RBP22.36■■□□□ 1.17
DENND3-201ENST00000262585 EIF4G1Q04637 1599 aaKnown RBP22.36■■□□□ 1.17
DENND3-201ENST00000262585 ZBTB47Q9UFB7 747 aaPredicted RBP22.35■■□□□ 1.17
DENND3-201ENST00000262585 RAB3GAP2Q9H2M9 1393 aa22.33■■□□□ 1.16
DENND3-201ENST00000262585 WDR43Q15061 677 aaKnown RBP eCLIP22.32■■□□□ 1.16
DENND3-201ENST00000262585 CARD11Q9BXL7 1154 aa22.32■■□□□ 1.16
DENND3-201ENST00000262585 ESF1Q9H501 851 aaKnown RBP22.29■■□□□ 1.16
DENND3-201ENST00000262585 FOXD1Q16676 465 aa22.28■■□□□ 1.16
DENND3-201ENST00000262585 PLPPR3Q6T4P5 718 aa22.28■■□□□ 1.16
DENND3-201ENST00000262585 ARHGAP35Q9NRY4 1499 aa22.26■■□□□ 1.15
DENND3-201ENST00000262585 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
DENND3-201ENST00000262585 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
DENND3-201ENST00000262585 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
DENND3-201ENST00000262585 FHOD3Q2V2M9 1422 aa22.2■■□□□ 1.14
DENND3-201ENST00000262585 HSPA5P11021 654 aaKnown RBP22.17■■□□□ 1.14
DENND3-201ENST00000262585 NBR1Q14596 966 aa22.15■■□□□ 1.14
DENND3-201ENST00000262585 DCAF11Q8TEB1 546 aa22.14■■□□□ 1.14
DENND3-201ENST00000262585 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.14■■□□□ 1.13
DENND3-201ENST00000262585 PPP1R15AO75807 674 aaPredicted RBP22.13■■□□□ 1.13
DENND3-201ENST00000262585 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
DENND3-201ENST00000262585 PDS5BQ9NTI5 1447 aa22.12■■□□□ 1.13
DENND3-201ENST00000262585 DHX57Q6P158 1386 aaKnown RBP22.1■■□□□ 1.13
DENND3-201ENST00000262585 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
DENND3-201ENST00000262585 PKD2Q13563 968 aa22.09■■□□□ 1.13
DENND3-201ENST00000262585 KNSTRNQ9Y448 316 aa22.08■■□□□ 1.13
DENND3-201ENST00000262585 CCER2I3L3R5 266 aa22.06■■□□□ 1.12
DENND3-201ENST00000262585 CC2D1BQ5T0F9 858 aaKnown RBP22.05■■□□□ 1.12
DENND3-201ENST00000262585 B4GALNT3Q6L9W6 998 aa22.01■■□□□ 1.11
DENND3-201ENST00000262585 UPF2Q9HAU5 1272 aaKnown RBP22■■□□□ 1.11
DENND3-201ENST00000262585 L3MBTL2Q969R5 705 aa21.99■■□□□ 1.11
DENND3-201ENST00000262585 PPP4R2Q9NY27 417 aa21.99■■□□□ 1.11
DENND3-201ENST00000262585 IGF1RP08069 1367 aa21.98■■□□□ 1.11
DENND3-201ENST00000262585 CDCA8Q53HL2 280 aa21.97■■□□□ 1.11
DENND3-201ENST00000262585 NEUROD2Q15784 382 aa21.96■■□□□ 1.11
DENND3-201ENST00000262585 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
DENND3-201ENST00000262585 TNNT2P45379 298 aaPredicted RBP21.93■■□□□ 1.1
DENND3-201ENST00000262585 HSP90AA1P07900 732 aaKnown RBP21.93■■□□□ 1.1
DENND3-201ENST00000262585 NUP155O75694 1391 aa21.91■■□□□ 1.1
DENND3-201ENST00000262585 CARMIL2Q6F5E8 1435 aa21.89■■□□□ 1.09
DENND3-201ENST00000262585 TMF1P82094 1093 aa21.88■■□□□ 1.09
DENND3-201ENST00000262585 HNRNPMP52272 730 aaKnown RBP eCLIP21.87■■□□□ 1.09
DENND3-201ENST00000262585 FGD5Q6ZNL6 1462 aa21.86■■□□□ 1.09
DENND3-201ENST00000262585 PPM1GO15355 546 aaPredicted RBP21.86■■□□□ 1.09
DENND3-201ENST00000262585 KIF21BO75037 1637 aa21.85■■□□□ 1.09
DENND3-201ENST00000262585 RAD54L2Q9Y4B4 1467 aa21.85■■□□□ 1.09
DENND3-201ENST00000262585 ANP32EQ9BTT0 268 aa21.84■■□□□ 1.09
DENND3-201ENST00000262585 CFAP53Q96M91 514 aa21.84■■□□□ 1.09
DENND3-201ENST00000262585 JPH4Q96JJ6 628 aa21.83■■□□□ 1.08
DENND3-201ENST00000262585 ANKRD30AQ9BXX3 1397 aa21.81■■□□□ 1.08
DENND3-201ENST00000262585 PLEKHG5O94827 1062 aa21.8■■□□□ 1.08
DENND3-201ENST00000262585 ARXQ96QS3 562 aa21.79■■□□□ 1.08
DENND3-201ENST00000262585 NCAPD3P42695 1498 aa21.78■■□□□ 1.08
DENND3-201ENST00000262585 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
DENND3-201ENST00000262585 RBM19Q9Y4C8 960 aaKnown RBP21.76■■□□□ 1.07
DENND3-201ENST00000262585 PHLDB1Q86UU1 1377 aa21.76■■□□□ 1.07
DENND3-201ENST00000262585 RGS3P49796 1198 aa21.76■■□□□ 1.07
DENND3-201ENST00000262585 FRAT1Q92837 279 aaPredicted RBP21.76■■□□□ 1.07
DENND3-201ENST00000262585 GGT6Q6P531 493 aa21.75■■□□□ 1.07
DENND3-201ENST00000262585 POGKQ9P215 609 aa21.75■■□□□ 1.07
DENND3-201ENST00000262585 ROCK2O75116 1388 aaKnown RBP21.74■■□□□ 1.07
DENND3-201ENST00000262585 CCDC18Q5T9S5 1454 aa21.74■■□□□ 1.07
DENND3-201ENST00000262585 SAFB2Q14151 953 aaKnown RBP eCLIP21.73■■□□□ 1.07
DENND3-201ENST00000262585 ARAP1Q96P48 1450 aa21.72■■□□□ 1.07
DENND3-201ENST00000262585 EFCAB2Q5VUJ9 269 aa21.72■■□□□ 1.07
DENND3-201ENST00000262585 ARID4BQ4LE39 1312 aaPredicted RBP21.71■■□□□ 1.07
DENND3-201ENST00000262585 KANK1Q14678 1352 aa21.7■■□□□ 1.06
DENND3-201ENST00000262585 C14orf37Q86TY3 774 aa21.69■■□□□ 1.06
DENND3-201ENST00000262585 LAS1LQ9Y4W2 734 aaKnown RBP21.69■■□□□ 1.06
DENND3-201ENST00000262585 U2SURPO15042 1029 aaKnown RBP21.69■■□□□ 1.06
DENND3-201ENST00000262585 ZBTB7CA1YPR0 619 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms