RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 HIRIP3Q9BW71 556 aaPredicted RBP13.55□□□□□ -0.24
PKD1-201ENST00000262304 CSRNP3Q8WYN3 585 aa13.55□□□□□ -0.24
PKD1-201ENST00000262304 ZNF777Q9ULD5 760 aaPredicted RBP13.55□□□□□ -0.24
PKD1-201ENST00000262304 CHGAP10645 457 aaKnown RBP13.53□□□□□ -0.24
PKD1-201ENST00000262304 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
PKD1-201ENST00000262304 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.53□□□□□ -0.24
PKD1-201ENST00000262304 ERICH6BQ5W0A0 696 aa13.5□□□□□ -0.25
PKD1-201ENST00000262304 ESF1Q9H501 851 aaKnown RBP13.49□□□□□ -0.25
PKD1-201ENST00000262304 BECN1Q14457 450 aa13.48□□□□□ -0.25
PKD1-201ENST00000262304 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
PKD1-201ENST00000262304 SPRYD3Q8NCJ5 442 aa13.47□□□□□ -0.25
PKD1-201ENST00000262304 KAT6BQ8WYB5 2073 aa13.47□□□□□ -0.25
PKD1-201ENST00000262304 MIER1Q8N108 512 aa13.47□□□□□ -0.25
PKD1-201ENST00000262304 MYH16Q9H6N6 1097 aa13.46□□□□□ -0.25
PKD1-201ENST00000262304 ZRSR1Q15695 479 aaKnown RBP13.45□□□□□ -0.26
PKD1-201ENST00000262304 TMC1Q8TDI8 760 aa13.45□□□□□ -0.26
PKD1-201ENST00000262304 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
PKD1-201ENST00000262304 DEKP35659 375 aaKnown RBP13.43□□□□□ -0.26
PKD1-201ENST00000262304 NPM1P06748 294 aaKnown RBP eCLIP13.42□□□□□ -0.26
PKD1-201ENST00000262304 MRS2Q9HD23 443 aa13.42□□□□□ -0.26
PKD1-201ENST00000262304 STAG3Q9UJ98 1225 aa13.41□□□□□ -0.26
PKD1-201ENST00000262304 PDE4CQ08493 712 aa13.41□□□□□ -0.26
PKD1-201ENST00000262304 GOLGA6L22H0YM25 854 aa13.4□□□□□ -0.26
PKD1-201ENST00000262304 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
PKD1-201ENST00000262304 WDR43Q15061 677 aaKnown RBP eCLIP13.4□□□□□ -0.26
PKD1-201ENST00000262304 CLSTN1O94985 981 aa13.39□□□□□ -0.27
PKD1-201ENST00000262304 NAP1L2Q9ULW6 460 aaPredicted RBP13.39□□□□□ -0.27
PKD1-201ENST00000262304 RB1CC1Q8TDY2 1594 aa13.38□□□□□ -0.27
PKD1-201ENST00000262304 RGS3P49796 1198 aa13.38□□□□□ -0.27
PKD1-201ENST00000262304 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
PKD1-201ENST00000262304 TONSLQ96HA7 1378 aa13.37□□□□□ -0.27
PKD1-201ENST00000262304 NOP58Q9Y2X3 529 aaKnown RBP13.35□□□□□ -0.27
PKD1-201ENST00000262304 DRC7Q8IY82 874 aa13.34□□□□□ -0.27
PKD1-201ENST00000262304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.34□□□□□ -0.276e-7■□□□□ 9.5
PKD1-201ENST00000262304 C14orf37Q86TY3 774 aa13.33□□□□□ -0.28
PKD1-201ENST00000262304 HSP90AB1P08238 724 aaKnown RBP13.33□□□□□ -0.28
PKD1-201ENST00000262304 SUPT16HQ9Y5B9 1047 aaKnown RBP13.32□□□□□ -0.28
PKD1-201ENST00000262304 CHMP7Q8WUX9 453 aaPredicted RBP13.32□□□□□ -0.28
PKD1-201ENST00000262304 GZF1Q9H116 711 aaPredicted RBP13.29□□□□□ -0.28
PKD1-201ENST00000262304 TNNT3P45378 269 aaPredicted RBP13.29□□□□□ -0.28
PKD1-201ENST00000262304 CHIC2Q9UKJ5 165 aa13.26□□□□□ -0.29
PKD1-201ENST00000262304 PRM3Q9NNZ6 103 aa13.26□□□□□ -0.29
PKD1-201ENST00000262304 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
PKD1-201ENST00000262304 CHAF1AQ13111 956 aaPredicted RBP13.25□□□□□ -0.29
PKD1-201ENST00000262304 NOC3LQ8WTT2 800 aaKnown RBP13.24□□□□□ -0.29
PKD1-201ENST00000262304 FTSJ3Q8IY81 847 aaKnown RBP13.24□□□□□ -0.29
PKD1-201ENST00000262304 B4GALNT3Q6L9W6 998 aa13.24□□□□□ -0.29
PKD1-201ENST00000262304 FGD1P98174 961 aa13.23□□□□□ -0.29
PKD1-201ENST00000262304 MSNP26038 577 aaKnown RBP13.23□□□□□ -0.29
PKD1-201ENST00000262304 GOLGA6L6A8MZA4 724 aa13.23□□□□□ -0.29
PKD1-201ENST00000262304 PPM1GO15355 546 aaPredicted RBP13.22□□□□□ -0.29
PKD1-201ENST00000262304 CASC1Q6TDU7 716 aa13.21□□□□□ -0.29
PKD1-201ENST00000262304 NEUROD2Q15784 382 aa13.21□□□□□ -0.29
PKD1-201ENST00000262304 NACADO15069 1562 aa13.2□□□□□ -0.3
PKD1-201ENST00000262304 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
PKD1-201ENST00000262304 MTUS2Q5JR59 1369 aa13.18□□□□□ -0.3
PKD1-201ENST00000262304 KCNJ4P48050 445 aa13.18□□□□□ -0.3
PKD1-201ENST00000262304 TSPY4P0CV99 314 aa13.17□□□□□ -0.3
PKD1-201ENST00000262304 TSPY10P0CW01 314 aa13.17□□□□□ -0.3
PKD1-201ENST00000262304 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
PKD1-201ENST00000262304 ISY1Q9ULR0 285 aaKnown RBP13.17□□□□□ -0.3
PKD1-201ENST00000262304 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
PKD1-201ENST00000262304 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
PKD1-201ENST00000262304 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
PKD1-201ENST00000262304 GOLGA6L4A6NEF3 574 aa13.16□□□□□ -0.3
PKD1-201ENST00000262304 OS9Q13438 667 aaPredicted RBP13.14□□□□□ -0.31
PKD1-201ENST00000262304 NPHP1O15259 732 aa13.13□□□□□ -0.31
PKD1-201ENST00000262304 TIMELESSQ9UNS1 1208 aa13.13□□□□□ -0.31
PKD1-201ENST00000262304 APBB1O00213 710 aa13.12□□□□□ -0.31
PKD1-201ENST00000262304 CLIP1P30622 1438 aa13.12□□□□□ -0.31
PKD1-201ENST00000262304 VSIG10Q8N0Z9 540 aa13.12□□□□□ -0.31
PKD1-201ENST00000262304 NRDCO43847 1150 aa13.12□□□□□ -0.31
PKD1-201ENST00000262304 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
PKD1-201ENST00000262304 HSCBQ8IWL3 235 aa13.11□□□□□ -0.31
PKD1-201ENST00000262304 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
PKD1-201ENST00000262304 PTMSP20962 102 aa13.1□□□□□ -0.31
PKD1-201ENST00000262304 L1TD1Q5T7N2 865 aaKnown RBP13.09□□□□□ -0.31
PKD1-201ENST00000262304 FOXD4L1Q9NU39 408 aa13.09□□□□□ -0.31
PKD1-201ENST00000262304 SLKQ9H2G2 1235 aaPredicted RBP13.08□□□□□ -0.31
PKD1-201ENST00000262304 FOXD4L5Q5VV16 416 aaPredicted RBP13.08□□□□□ -0.32
PKD1-201ENST00000262304 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.32
PKD1-201ENST00000262304 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
PKD1-201ENST00000262304 PLEKHD1A6NEE1 506 aa13.06□□□□□ -0.32
PKD1-201ENST00000262304 HAP1P54257 671 aaPredicted RBP13.06□□□□□ -0.32
PKD1-201ENST00000262304 DCAF1Q9Y4B6 1507 aa13.05□□□□□ -0.32
PKD1-201ENST00000262304 CREBRFQ8IUR6 639 aa13.05□□□□□ -0.32
PKD1-201ENST00000262304 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
PKD1-201ENST00000262304 TAF7LQ5H9L4 462 aa13.05□□□□□ -0.32
PKD1-201ENST00000262304 KIAA2012Q0VF49 1180 aa13.04□□□□□ -0.32
PKD1-201ENST00000262304 GNL2Q13823 731 aaKnown RBP13.04□□□□□ -0.32
PKD1-201ENST00000262304 RRP7BPQ9NSQ0 103 aa13.04□□□□□ -0.32
PKD1-201ENST00000262304 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
PKD1-201ENST00000262304 CALRP27797 417 aaKnown RBP13.03□□□□□ -0.32
PKD1-201ENST00000262304 GOLGA2Q08379 1002 aa13.03□□□□□ -0.32
PKD1-201ENST00000262304 PPP1R15AO75807 674 aaPredicted RBP13.02□□□□□ -0.32
PKD1-201ENST00000262304 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.33
PKD1-201ENST00000262304 WRNQ14191 1432 aaPredicted RBP eCLIP13.01□□□□□ -0.33
PKD1-201ENST00000262304 KIF27Q86VH2 1401 aa13.01□□□□□ -0.33
PKD1-201ENST00000262304 NOL8Q76FK4 1167 aaKnown RBP13.01□□□□□ -0.33
PKD1-201ENST00000262304 GOLGA3Q08378 1498 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms