RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 JPH4Q96JJ6 628 aa23.67■■□□□ 1.38
SGCA-201ENST00000262018 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
SGCA-201ENST00000262018 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
SGCA-201ENST00000262018 MAPKBP1O60336 1514 aa23.64■■□□□ 1.37
SGCA-201ENST00000262018 ERICH3Q5RHP9 1530 aa23.56■■□□□ 1.36
SGCA-201ENST00000262018 TSPOAP1O95153 1857 aa23.55■■□□□ 1.36
SGCA-201ENST00000262018 ADCY10Q96PN6 1610 aa23.54■■□□□ 1.36
SGCA-201ENST00000262018 RUSC2Q8N2Y8 1516 aa23.47■■□□□ 1.35
SGCA-201ENST00000262018 TOP2BQ02880 1626 aa23.45■■□□□ 1.35
SGCA-201ENST00000262018 BIVM-ERCC5R4GMW8 1640 aa23.45■■□□□ 1.34
SGCA-201ENST00000262018 ADGRL1O94910 1474 aa23.43■■□□□ 1.34
SGCA-201ENST00000262018 HECW2Q9P2P5 1572 aa23.36■■□□□ 1.33
SGCA-201ENST00000262018 TTBK1Q5TCY1 1321 aaPredicted RBP23.32■■□□□ 1.32
SGCA-201ENST00000262018 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
SGCA-201ENST00000262018 PTPRGP23470 1445 aa23.28■■□□□ 1.32
SGCA-201ENST00000262018 PPRC1Q5VV67 1664 aaKnown RBP23.26■■□□□ 1.31
SGCA-201ENST00000262018 ASXL2Q76L83 1435 aa23.24■■□□□ 1.31
SGCA-201ENST00000262018 PLB1Q6P1J6 1458 aa23.23■■□□□ 1.31
SGCA-201ENST00000262018 GLI2P10070 1586 aa23.22■■□□□ 1.31
SGCA-201ENST00000262018 ABCC2Q92887 1545 aa23.22■■□□□ 1.31
SGCA-201ENST00000262018 COL17A1Q9UMD9 1497 aaPredicted RBP23.22■■□□□ 1.31
SGCA-201ENST00000262018 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
SGCA-201ENST00000262018 TNIKQ9UKE5 1360 aa23.16■■□□□ 1.3
SGCA-201ENST00000262018 FBXO41Q8TF61 875 aa23.16■■□□□ 1.3
SGCA-201ENST00000262018 IGF1RP08069 1367 aa23.12■■□□□ 1.29
SGCA-201ENST00000262018 CARMIL2Q6F5E8 1435 aa23.12■■□□□ 1.29
SGCA-201ENST00000262018 CUL7Q14999 1698 aa23.11■■□□□ 1.29
SGCA-201ENST00000262018 TEX14Q8IWB6 1497 aa23.09■■□□□ 1.29
SGCA-201ENST00000262018 EPRSP07814 1512 aaKnown RBP23.09■■□□□ 1.29
SGCA-201ENST00000262018 UHRF1BP1LA0JNW5 1464 aa23.07■■□□□ 1.28
SGCA-201ENST00000262018 MAP3K4Q9Y6R4 1608 aa23.06■■□□□ 1.28
SGCA-201ENST00000262018 UACAQ9BZF9 1416 aa23.05■■□□□ 1.28
SGCA-201ENST00000262018 KIF27Q86VH2 1401 aa23.02■■□□□ 1.28
SGCA-201ENST00000262018 KDM5BQ9UGL1 1544 aa22.98■■□□□ 1.27
SGCA-201ENST00000262018 CARMIL1Q5VZK9 1371 aa22.97■■□□□ 1.27
SGCA-201ENST00000262018 IQGAP2Q13576 1575 aa22.95■■□□□ 1.26
SGCA-201ENST00000262018 ZCCHC11Q5TAX3 1644 aaKnown RBP22.93■■□□□ 1.26
SGCA-201ENST00000262018 DISP1Q96F81 1524 aa22.91■■□□□ 1.26
SGCA-201ENST00000262018 WDR7Q9Y4E6 1490 aa22.87■■□□□ 1.25
SGCA-201ENST00000262018 CD109Q6YHK3 1445 aa22.85■■□□□ 1.25
SGCA-201ENST00000262018 KIF21BO75037 1637 aa22.84■■□□□ 1.25
SGCA-201ENST00000262018 MAGI3Q5TCQ9 1506 aa22.82■■□□□ 1.24
SGCA-201ENST00000262018 KCNH8Q96L42 1107 aa22.82■■□□□ 1.24
SGCA-201ENST00000262018 LMTK3Q96Q04 1460 aa22.78■■□□□ 1.24
SGCA-201ENST00000262018 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
SGCA-201ENST00000262018 PTPRMP28827 1452 aa22.76■■□□□ 1.23
SGCA-201ENST00000262018 CFAP43Q8NDM7 1665 aa22.76■■□□□ 1.23
SGCA-201ENST00000262018 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
SGCA-201ENST00000262018 ADAMTSL3P82987 1691 aa22.68■■□□□ 1.22
SGCA-201ENST00000262018 ARAP3Q8WWN8 1544 aa22.67■■□□□ 1.22
SGCA-201ENST00000262018 PCF11O94913 1555 aaKnown RBP22.66■■□□□ 1.22
SGCA-201ENST00000262018 RAPGEF2Q9Y4G8 1499 aa22.64■■□□□ 1.21
SGCA-201ENST00000262018 ARID4BQ4LE39 1312 aaPredicted RBP22.61■■□□□ 1.21
SGCA-201ENST00000262018 ABCA8O94911 1581 aa22.59■■□□□ 1.21
SGCA-201ENST00000262018 RAPGEF3O95398 923 aa22.58■■□□□ 1.21
SGCA-201ENST00000262018 MADDQ8WXG6 1647 aa22.56■■□□□ 1.2
SGCA-201ENST00000262018 HSPA2P54652 639 aa22.56■■□□□ 1.2
SGCA-201ENST00000262018 ILDR2Q71H61 639 aa22.56■■□□□ 1.2
SGCA-201ENST00000262018 CERKQ8TCT0 537 aa22.56■■□□□ 1.2
SGCA-201ENST00000262018 BCORL1Q5H9F3 1711 aa22.55■■□□□ 1.2
SGCA-201ENST00000262018 ARID3CA6NKF2 412 aa22.55■■□□□ 1.2
SGCA-201ENST00000262018 SOCS7O14512 581 aa22.54■■□□□ 1.2
SGCA-201ENST00000262018 GOLGA3Q08378 1498 aa22.54■■□□□ 1.2
SGCA-201ENST00000262018 PHLDB1Q86UU1 1377 aa22.53■■□□□ 1.2
SGCA-201ENST00000262018 DISP3Q9P2K9 1392 aa22.53■■□□□ 1.2
SGCA-201ENST00000262018 PLPPR3Q6T4P5 718 aa22.5■■□□□ 1.19
SGCA-201ENST00000262018 RIMS1Q86UR5 1692 aaKnown RBP22.47■■□□□ 1.19
SGCA-201ENST00000262018 CTTNBP2Q8WZ74 1663 aa22.45■■□□□ 1.18
SGCA-201ENST00000262018 ABCA9Q8IUA7 1624 aa22.44■■□□□ 1.18
SGCA-201ENST00000262018 ATP10BO94823 1461 aa22.44■■□□□ 1.18
SGCA-201ENST00000262018 NEO1Q92859 1461 aa22.44■■□□□ 1.18
SGCA-201ENST00000262018 FRMPD1Q5SYB0 1578 aa22.42■■□□□ 1.18
SGCA-201ENST00000262018 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
SGCA-201ENST00000262018 P3H3Q8IVL6 736 aa22.37■■□□□ 1.17
SGCA-201ENST00000262018 ARHGEF40Q8TER5 1519 aa22.35■■□□□ 1.17
SGCA-201ENST00000262018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.33■■□□□ 1.17
SGCA-201ENST00000262018 HNRNPUL2Q1KMD3 747 aaKnown RBP22.33■■□□□ 1.17
SGCA-201ENST00000262018 POGZQ7Z3K3 1410 aa22.32■■□□□ 1.16
SGCA-201ENST00000262018 DENND4BO75064 1496 aaPredicted RBP22.31■■□□□ 1.16
SGCA-201ENST00000262018 MLECQ14165 292 aa22.3■■□□□ 1.16
SGCA-201ENST00000262018 FANCAO15360 1455 aa22.29■■□□□ 1.16
SGCA-201ENST00000262018 AKNAQ7Z591 1439 aa22.28■■□□□ 1.16
SGCA-201ENST00000262018 SPATA31D1Q6ZQQ2 1576 aa22.25■■□□□ 1.15
SGCA-201ENST00000262018 RICTORQ6R327 1708 aa22.25■■□□□ 1.15
SGCA-201ENST00000262018 FHOD3Q2V2M9 1422 aa22.24■■□□□ 1.15
SGCA-201ENST00000262018 YEATS2Q9ULM3 1422 aa22.22■■□□□ 1.15
SGCA-201ENST00000262018 ZFYVE16Q7Z3T8 1539 aa22.2■■□□□ 1.14
SGCA-201ENST00000262018 SIGLEC1Q9BZZ2 1709 aa22.2■■□□□ 1.14
SGCA-201ENST00000262018 DMRT2Q9Y5R5 561 aa22.2■■□□□ 1.14
SGCA-201ENST00000262018 RAPGEF6Q8TEU7 1601 aa22.2■■□□□ 1.14
SGCA-201ENST00000262018 PRXQ9BXM0 1461 aa22.19■■□□□ 1.14
SGCA-201ENST00000262018 FER1L4A9Z1Z3 1794 aa22.19■■□□□ 1.14
SGCA-201ENST00000262018 TTC37Q6PGP7 1564 aa22.18■■□□□ 1.14
SGCA-201ENST00000262018 EFCAB5A4FU69 1503 aa22.17■■□□□ 1.14
SGCA-201ENST00000262018 ZMYM4Q5VZL5 1548 aa22.17■■□□□ 1.14
SGCA-201ENST00000262018 PLEKHD1A6NEE1 506 aa22.14■■□□□ 1.14
SGCA-201ENST00000262018 CEBPAP49715 358 aaPredicted RBP22.14■■□□□ 1.14
SGCA-201ENST00000262018 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.14
SGCA-201ENST00000262018 CFAP74Q9C0B2 1584 aa22.14■■□□□ 1.14
SGCA-201ENST00000262018 PREX1Q8TCU6 1659 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms