RNA–Protein interactions for RNA: ENST00000261833.11

CIT-201, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIT, Length 8,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-201ENST00000261833 MRS2Q9HD23 443 aa12.93□□□□□ -0.34
CIT-201ENST00000261833 RSF1Q96T23 1441 aaPredicted RBP12.93□□□□□ -0.34
CIT-201ENST00000261833 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.35
CIT-201ENST00000261833 PPP4R2Q9NY27 417 aa12.89□□□□□ -0.35
CIT-201ENST00000261833 EIF4G2P78344 907 aaKnown RBP eCLIP12.88□□□□□ -0.35
CIT-201ENST00000261833 WDR43Q15061 677 aaKnown RBP eCLIP12.87□□□□□ -0.35
CIT-201ENST00000261833 ABCC8Q09428 1581 aa12.87□□□□□ -0.35
CIT-201ENST00000261833 IRX6P78412 446 aaPredicted RBP12.86□□□□□ -0.35
CIT-201ENST00000261833 GOLGA6L22H0YM25 854 aa12.86□□□□□ -0.35
CIT-201ENST00000261833 MTUS2Q5JR59 1369 aa12.86□□□□□ -0.35
CIT-201ENST00000261833 NPM1P06748 294 aaKnown RBP eCLIP12.84□□□□□ -0.35
CIT-201ENST00000261833 ARXQ96QS3 562 aa12.83□□□□□ -0.36
CIT-201ENST00000261833 FHAD1B1AJZ9 1412 aa12.82□□□□□ -0.36
CIT-201ENST00000261833 DEKP35659 375 aaKnown RBP12.82□□□□□ -0.36
CIT-201ENST00000261833 WRNQ14191 1432 aaPredicted RBP eCLIP12.82□□□□□ -0.36
CIT-201ENST00000261833 BAZ1BQ9UIG0 1483 aaKnown RBP12.82□□□□□ -0.36
CIT-201ENST00000261833 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
CIT-201ENST00000261833 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
CIT-201ENST00000261833 MYH16Q9H6N6 1097 aa12.8□□□□□ -0.36
CIT-201ENST00000261833 RBM19Q9Y4C8 960 aaKnown RBP12.8□□□□□ -0.36
CIT-201ENST00000261833 PRDM2Q13029 1718 aa12.79□□□□□ -0.36
CIT-201ENST00000261833 P3H3Q8IVL6 736 aa12.79□□□□□ -0.36
CIT-201ENST00000261833 CCER2I3L3R5 266 aa12.79□□□□□ -0.36
CIT-201ENST00000261833 KIF27Q86VH2 1401 aa12.78□□□□□ -0.36
CIT-201ENST00000261833 NAP1L5Q96NT1 182 aaPredicted RBP12.78□□□□□ -0.36
CIT-201ENST00000261833 CCNB3Q8WWL7 1395 aa12.78□□□□□ -0.36
CIT-201ENST00000261833 SMARCA4P51532 1647 aa12.77□□□□□ -0.36
CIT-201ENST00000261833 L1TD1Q5T7N2 865 aaKnown RBP12.77□□□□□ -0.36
CIT-201ENST00000261833 ARHGAP35Q9NRY4 1499 aa12.77□□□□□ -0.37
CIT-201ENST00000261833 VPS8Q8N3P4 1428 aa12.76□□□□□ -0.37
CIT-201ENST00000261833 TULP1O00294 542 aaPredicted RBP12.76□□□□□ -0.37
CIT-201ENST00000261833 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
CIT-201ENST00000261833 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
CIT-201ENST00000261833 KIF21BO75037 1637 aa12.74□□□□□ -0.37
CIT-201ENST00000261833 SMARCA2P51531 1590 aa12.74□□□□□ -0.37
CIT-201ENST00000261833 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
CIT-201ENST00000261833 CASC1Q6TDU7 716 aa12.73□□□□□ -0.37
CIT-201ENST00000261833 SALL2Q9Y467 1007 aaPredicted RBP12.72□□□□□ -0.37
CIT-201ENST00000261833 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.38
CIT-201ENST00000261833 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
CIT-201ENST00000261833 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
CIT-201ENST00000261833 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
CIT-201ENST00000261833 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
CIT-201ENST00000261833 PTMSP20962 102 aa12.69□□□□□ -0.38
CIT-201ENST00000261833 ZNF777Q9ULD5 760 aaPredicted RBP12.69□□□□□ -0.38
CIT-201ENST00000261833 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
CIT-201ENST00000261833 DNTTIP2Q5QJE6 756 aaKnown RBP12.67□□□□□ -0.38
CIT-201ENST00000261833 CHGAP10645 457 aaKnown RBP12.67□□□□□ -0.38
CIT-201ENST00000261833 HIRIP3Q9BW71 556 aaPredicted RBP12.67□□□□□ -0.38
CIT-201ENST00000261833 C14orf37Q86TY3 774 aa12.66□□□□□ -0.38
CIT-201ENST00000261833 PTMAP06454 111 aaKnown RBP12.66□□□□□ -0.38
CIT-201ENST00000261833 KAT6BQ8WYB5 2073 aa12.66□□□□□ -0.38
CIT-201ENST00000261833 MSNP26038 577 aaKnown RBP12.65□□□□□ -0.39
CIT-201ENST00000261833 SUPT6HQ7KZ85 1726 aaKnown RBP12.64□□□□□ -0.39
CIT-201ENST00000261833 FTSJ3Q8IY81 847 aaKnown RBP12.64□□□□□ -0.39
CIT-201ENST00000261833 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
CIT-201ENST00000261833 CHAF1AQ13111 956 aaPredicted RBP12.63□□□□□ -0.39
CIT-201ENST00000261833 USP35Q9P2H5 1018 aa12.63□□□□□ -0.39
CIT-201ENST00000261833 TSHZ2Q9NRE2 1034 aa12.63□□□□□ -0.39
CIT-201ENST00000261833 B4GALNT3Q6L9W6 998 aa12.63□□□□□ -0.39
CIT-201ENST00000261833 ZBTB7CA1YPR0 619 aa12.63□□□□□ -0.39
CIT-201ENST00000261833 CDK11BP21127 795 aaKnown RBP12.63□□□□□ -0.39
CIT-201ENST00000261833 SENP3Q9H4L4 574 aaPredicted RBP12.62□□□□□ -0.39
CIT-201ENST00000261833 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
CIT-201ENST00000261833 TRHP20396 242 aaPredicted RBP12.61□□□□□ -0.39
CIT-201ENST00000261833 CHIC2Q9UKJ5 165 aa12.61□□□□□ -0.39
CIT-201ENST00000261833 CHMP4BQ9H444 224 aaKnown RBP12.6□□□□□ -0.39
CIT-201ENST00000261833 ARID3CA6NKF2 412 aa12.59□□□□□ -0.39
CIT-201ENST00000261833 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
CIT-201ENST00000261833 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
CIT-201ENST00000261833 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
CIT-201ENST00000261833 GOLGA6L6A8MZA4 724 aa12.59□□□□□ -0.39
CIT-201ENST00000261833 AEBP2Q6ZN18 517 aaPredicted RBP12.59□□□□□ -0.39
CIT-201ENST00000261833 RSPH6AQ9H0K4 717 aa12.59□□□□□ -0.39
CIT-201ENST00000261833 ARID4BQ4LE39 1312 aaPredicted RBP12.59□□□□□ -0.39
CIT-201ENST00000261833 HSP90AB1P08238 724 aaKnown RBP12.58□□□□□ -0.4
CIT-201ENST00000261833 MS4A1P11836 297 aa12.58□□□□□ -0.4
CIT-201ENST00000261833 HSCBQ8IWL3 235 aa12.58□□□□□ -0.4
CIT-201ENST00000261833 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
CIT-201ENST00000261833 CUX1P39880 1505 aa12.58□□□□□ -0.4
CIT-201ENST00000261833 TCERG1O14776 1098 aaKnown RBP12.56□□□□□ -0.4
CIT-201ENST00000261833 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
CIT-201ENST00000261833 FANCIQ9NVI1 1328 aa12.55□□□□□ -0.4
CIT-201ENST00000261833 CTTNBP2Q8WZ74 1663 aa12.55□□□□□ -0.4
CIT-201ENST00000261833 SOGA1O94964 1423 aa12.54□□□□□ -0.4
CIT-201ENST00000261833 EIF4G1Q04637 1599 aaKnown RBP12.54□□□□□ -0.4
CIT-201ENST00000261833 NPHP1O15259 732 aa12.54□□□□□ -0.4
CIT-201ENST00000261833 ZRSR1Q15695 479 aaKnown RBP12.54□□□□□ -0.4
CIT-201ENST00000261833 RRP7BPQ9NSQ0 103 aa12.54□□□□□ -0.4
CIT-201ENST00000261833 TSPY4P0CV99 314 aa12.54□□□□□ -0.4
CIT-201ENST00000261833 TSPY10P0CW01 314 aa12.54□□□□□ -0.4
CIT-201ENST00000261833 RAB3GAP2Q9H2M9 1393 aa12.54□□□□□ -0.4
CIT-201ENST00000261833 CFAP53Q96M91 514 aa12.52□□□□□ -0.4
CIT-201ENST00000261833 CFAP65Q6ZU64 1925 aaKnown RBP12.51□□□□□ -0.41
CIT-201ENST00000261833 PHLDB1Q86UU1 1377 aa12.51□□□□□ -0.41
CIT-201ENST00000261833 KTN1Q86UP2 1357 aaKnown RBP12.5□□□□□ -0.41
CIT-201ENST00000261833 CARD11Q9BXL7 1154 aa12.5□□□□□ -0.41
CIT-201ENST00000261833 GBP4Q96PP9 640 aa12.5□□□□□ -0.41
CIT-201ENST00000261833 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.49□□□□□ -0.41
CIT-201ENST00000261833 FMN1Q68DA7 1419 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms