RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
KLF3-201ENST00000261438 EEA1Q15075 1411 aa23.08■■□□□ 1.28
KLF3-201ENST00000261438 CCER2I3L3R5 266 aa23.06■■□□□ 1.28
KLF3-201ENST00000261438 BECN1Q14457 450 aa23.02■■□□□ 1.28
KLF3-201ENST00000261438 NAP1L5Q96NT1 182 aaPredicted RBP23.01■■□□□ 1.27
KLF3-201ENST00000261438 TRIM44Q96DX7 344 aaPredicted RBP23■■□□□ 1.27
KLF3-201ENST00000261438 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.99■■□□□ 1.27
KLF3-201ENST00000261438 ABCC9O60706 1549 aa22.99■■□□□ 1.27
KLF3-201ENST00000261438 SIN3AQ96ST3 1273 aa22.97■■□□□ 1.27
KLF3-201ENST00000261438 CHIC2Q9UKJ5 165 aa22.93■■□□□ 1.26
KLF3-201ENST00000261438 SENP3-EIF4A1A0A087X0R7 540 aa22.93■■□□□ 1.26
KLF3-201ENST00000261438 ARID3CA6NKF2 412 aa22.91■■□□□ 1.26
KLF3-201ENST00000261438 WDR43Q15061 677 aaKnown RBP eCLIP22.85■■□□□ 1.255e-6■■■□□ 16.3
KLF3-201ENST00000261438 IPO9Q96P70 1041 aaKnown RBP22.81■■□□□ 1.24
KLF3-201ENST00000261438 ZNF777Q9ULD5 760 aaPredicted RBP22.81■■□□□ 1.24
KLF3-201ENST00000261438 FANCIQ9NVI1 1328 aa22.8■■□□□ 1.24
KLF3-201ENST00000261438 TIMELESSQ9UNS1 1208 aa22.79■■□□□ 1.24
KLF3-201ENST00000261438 CEP164Q9UPV0 1460 aa22.79■■□□□ 1.24
KLF3-201ENST00000261438 TNNT2P45379 298 aaPredicted RBP22.76■■□□□ 1.23
KLF3-201ENST00000261438 KCNH8Q96L42 1107 aa22.75■■□□□ 1.23
KLF3-201ENST00000261438 RB1CC1Q8TDY2 1594 aa22.74■■□□□ 1.23
KLF3-201ENST00000261438 MTUS2Q5JR59 1369 aa22.73■■□□□ 1.23
KLF3-201ENST00000261438 CCNB3Q8WWL7 1395 aa22.72■■□□□ 1.23
KLF3-201ENST00000261438 RRP7BPQ9NSQ0 103 aa22.72■■□□□ 1.23
KLF3-201ENST00000261438 L1TD1Q5T7N2 865 aaKnown RBP22.71■■□□□ 1.23
KLF3-201ENST00000261438 RGS3P49796 1198 aa22.71■■□□□ 1.23
KLF3-201ENST00000261438 KDM2AQ9Y2K7 1162 aa22.7■■□□□ 1.22
KLF3-201ENST00000261438 GOLGA6L22H0YM25 854 aa22.69■■□□□ 1.22
KLF3-201ENST00000261438 WRNQ14191 1432 aaPredicted RBP eCLIP22.64■■□□□ 1.211e-6■■■■■ 58.5
KLF3-201ENST00000261438 TCERG1O14776 1098 aaKnown RBP22.63■■□□□ 1.21
KLF3-201ENST00000261438 SOGA1O94964 1423 aa22.62■■□□□ 1.21
KLF3-201ENST00000261438 VPS8Q8N3P4 1428 aa22.6■■□□□ 1.21
KLF3-201ENST00000261438 USP35Q9P2H5 1018 aa22.6■■□□□ 1.21
KLF3-201ENST00000261438 NCLP19338 710 aaKnown RBP22.58■■□□□ 1.21
KLF3-201ENST00000261438 PNNQ9H307 717 aaKnown RBP22.58■■□□□ 1.2
KLF3-201ENST00000261438 PTMAP06454 111 aaKnown RBP22.54■■□□□ 1.2
KLF3-201ENST00000261438 SETD5Q9C0A6 1442 aa22.54■■□□□ 1.2
KLF3-201ENST00000261438 DNTTIP2Q5QJE6 756 aaKnown RBP22.54■■□□□ 1.2
KLF3-201ENST00000261438 HSPA5P11021 654 aaKnown RBP22.53■■□□□ 1.2
KLF3-201ENST00000261438 RSPH6AQ9H0K4 717 aa22.53■■□□□ 1.2
KLF3-201ENST00000261438 ARID4BQ4LE39 1312 aaPredicted RBP22.51■■□□□ 1.19
KLF3-201ENST00000261438 PRKCSHP14314 528 aaPredicted RBP22.5■■□□□ 1.19
KLF3-201ENST00000261438 PPP1R15AO75807 674 aaPredicted RBP22.48■■□□□ 1.19
KLF3-201ENST00000261438 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
KLF3-201ENST00000261438 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
KLF3-201ENST00000261438 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
KLF3-201ENST00000261438 NUDCQ9Y266 331 aa22.45■■□□□ 1.19
KLF3-201ENST00000261438 SLC24A1O60721 1099 aa22.45■■□□□ 1.18
KLF3-201ENST00000261438 CARD11Q9BXL7 1154 aa22.45■■□□□ 1.18
KLF3-201ENST00000261438 GSE1Q14687 1217 aa22.45■■□□□ 1.18
KLF3-201ENST00000261438 ANO8Q9HCE9 1232 aaPredicted RBP22.45■■□□□ 1.18
KLF3-201ENST00000261438 MSNP26038 577 aaKnown RBP22.43■■□□□ 1.18
KLF3-201ENST00000261438 RCAN3Q9UKA8 241 aa22.43■■□□□ 1.18
KLF3-201ENST00000261438 MYH16Q9H6N6 1097 aa22.41■■□□□ 1.18
KLF3-201ENST00000261438 HSP90AA2PQ14568 343 aaPredicted RBP22.39■■□□□ 1.18
KLF3-201ENST00000261438 VSIG10Q8N0Z9 540 aa22.39■■□□□ 1.18
KLF3-201ENST00000261438 FBLN2P98095 1184 aa22.38■■□□□ 1.17
KLF3-201ENST00000261438 SLKQ9H2G2 1235 aaPredicted RBP22.38■■□□□ 1.17
KLF3-201ENST00000261438 SPRYD3Q8NCJ5 442 aa22.37■■□□□ 1.17
KLF3-201ENST00000261438 GZF1Q9H116 711 aaPredicted RBP22.37■■□□□ 1.17
KLF3-201ENST00000261438 HSP90AB1P08238 724 aaKnown RBP22.37■■□□□ 1.17
KLF3-201ENST00000261438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.36■■□□□ 1.171e-7■□□□□ 8.2
KLF3-201ENST00000261438 GOLGA6L3A6NEY3 463 aa22.35■■□□□ 1.17
KLF3-201ENST00000261438 KNSTRNQ9Y448 316 aa22.35■■□□□ 1.17
KLF3-201ENST00000261438 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
KLF3-201ENST00000261438 TSPY4P0CV99 314 aa22.35■■□□□ 1.17
KLF3-201ENST00000261438 TSPY10P0CW01 314 aa22.35■■□□□ 1.17
KLF3-201ENST00000261438 HSCBQ8IWL3 235 aa22.34■■□□□ 1.17
KLF3-201ENST00000261438 PDE4AP27815 886 aa22.34■■□□□ 1.17
KLF3-201ENST00000261438 CDK11BP21127 795 aaKnown RBP22.34■■□□□ 1.17
KLF3-201ENST00000261438 FRAT1Q92837 279 aaPredicted RBP22.33■■□□□ 1.17
KLF3-201ENST00000261438 FTSJ3Q8IY81 847 aaKnown RBP22.32■■□□□ 1.16
KLF3-201ENST00000261438 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
KLF3-201ENST00000261438 CC2D1BQ5T0F9 858 aaKnown RBP22.3■■□□□ 1.16
KLF3-201ENST00000261438 CECR2Q9BXF3 1484 aa22.27■■□□□ 1.16
KLF3-201ENST00000261438 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
KLF3-201ENST00000261438 RGL3Q3MIN7 710 aa22.26■■□□□ 1.15
KLF3-201ENST00000261438 CHGAP10645 457 aaKnown RBP22.25■■□□□ 1.15
KLF3-201ENST00000261438 ZBED9Q6R2W3 1325 aa22.24■■□□□ 1.15
KLF3-201ENST00000261438 SLC4A3P48751 1232 aa22.24■■□□□ 1.15
KLF3-201ENST00000261438 NEUROD2Q15784 382 aa22.24■■□□□ 1.15
KLF3-201ENST00000261438 IL27Q8NEV9 243 aa22.23■■□□□ 1.15
KLF3-201ENST00000261438 CDCA8Q53HL2 280 aa22.21■■□□□ 1.15
KLF3-201ENST00000261438 ARID3AQ99856 593 aa22.2■■□□□ 1.14
KLF3-201ENST00000261438 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
KLF3-201ENST00000261438 PLCB2Q00722 1185 aa22.2■■□□□ 1.14
KLF3-201ENST00000261438 GBP4Q96PP9 640 aa22.19■■□□□ 1.14
KLF3-201ENST00000261438 TPRNQ4KMQ1 711 aa22.17■■□□□ 1.14
KLF3-201ENST00000261438 CASC1Q6TDU7 716 aa22.17■■□□□ 1.14
KLF3-201ENST00000261438 MS4A1P11836 297 aa22.15■■□□□ 1.14
KLF3-201ENST00000261438 CHAF1AQ13111 956 aaPredicted RBP22.15■■□□□ 1.14
KLF3-201ENST00000261438 PRKRIP1Q9H875 184 aaPredicted RBP22.15■■□□□ 1.14
KLF3-201ENST00000261438 PTMSP20962 102 aa22.15■■□□□ 1.14
KLF3-201ENST00000261438 RALBP1Q15311 655 aa22.15■■□□□ 1.14
KLF3-201ENST00000261438 CFAP53Q96M91 514 aa22.15■■□□□ 1.14
KLF3-201ENST00000261438 EXOC6Q8TAG9 804 aa22.14■■□□□ 1.13
KLF3-201ENST00000261438 PAK3O75914 559 aaPredicted RBP22.13■■□□□ 1.13
KLF3-201ENST00000261438 PDE3BQ13370 1112 aa22.13■■□□□ 1.13
KLF3-201ENST00000261438 MSH5O43196 834 aa22.12■■□□□ 1.13
KLF3-201ENST00000261438 KTN1Q86UP2 1357 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms