RNA–Protein interactions for RNA: ENST00000261226.8

TMCC3-201, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC3, Length 5,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-201ENST00000261226 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.61
TMCC3-201ENST00000261226 RRP7BPQ9NSQ0 103 aa18.86■□□□□ 0.61
TMCC3-201ENST00000261226 SIN3AQ96ST3 1273 aa18.84■□□□□ 0.61
TMCC3-201ENST00000261226 PPP4R2Q9NY27 417 aa18.83■□□□□ 0.61
TMCC3-201ENST00000261226 DDRGK1Q96HY6 314 aa18.83■□□□□ 0.61
TMCC3-201ENST00000261226 RTN4Q9NQC3 1192 aaKnown RBP18.8■□□□□ 0.6
TMCC3-201ENST00000261226 NOP58Q9Y2X3 529 aaKnown RBP18.79■□□□□ 0.6
TMCC3-201ENST00000261226 RBM19Q9Y4C8 960 aaKnown RBP18.79■□□□□ 0.6
TMCC3-201ENST00000261226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.6
TMCC3-201ENST00000261226 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
TMCC3-201ENST00000261226 LAS1LQ9Y4W2 734 aaKnown RBP18.77■□□□□ 0.6
TMCC3-201ENST00000261226 B4GALNT3Q6L9W6 998 aa18.77■□□□□ 0.6
TMCC3-201ENST00000261226 PPM1GO15355 546 aaPredicted RBP18.72■□□□□ 0.59
TMCC3-201ENST00000261226 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
TMCC3-201ENST00000261226 BECN1Q14457 450 aa18.72■□□□□ 0.59
TMCC3-201ENST00000261226 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
TMCC3-201ENST00000261226 TSPY4P0CV99 314 aa18.69■□□□□ 0.58
TMCC3-201ENST00000261226 TSPY10P0CW01 314 aa18.69■□□□□ 0.58
TMCC3-201ENST00000261226 TSHZ2Q9NRE2 1034 aa18.68■□□□□ 0.58
TMCC3-201ENST00000261226 DEKP35659 375 aaKnown RBP18.68■□□□□ 0.58
TMCC3-201ENST00000261226 TRIM44Q96DX7 344 aaPredicted RBP18.64■□□□□ 0.57
TMCC3-201ENST00000261226 CCER2I3L3R5 266 aa18.61■□□□□ 0.57
TMCC3-201ENST00000261226 RB1CC1Q8TDY2 1594 aa18.61■□□□□ 0.57
TMCC3-201ENST00000261226 CCNB3Q8WWL7 1395 aa18.6■□□□□ 0.57
TMCC3-201ENST00000261226 ERICH6BQ5W0A0 696 aa18.6■□□□□ 0.57
TMCC3-201ENST00000261226 SOGA1O94964 1423 aa18.59■□□□□ 0.57
TMCC3-201ENST00000261226 RGS3P49796 1198 aa18.58■□□□□ 0.56
TMCC3-201ENST00000261226 RGL3Q3MIN7 710 aa18.58■□□□□ 0.56
TMCC3-201ENST00000261226 CARD11Q9BXL7 1154 aa18.56■□□□□ 0.56
TMCC3-201ENST00000261226 MYH16Q9H6N6 1097 aa18.52■□□□□ 0.56
TMCC3-201ENST00000261226 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.56
TMCC3-201ENST00000261226 NAP1L5Q96NT1 182 aaPredicted RBP18.51■□□□□ 0.55
TMCC3-201ENST00000261226 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
TMCC3-201ENST00000261226 GOLGA6L22H0YM25 854 aa18.5■□□□□ 0.55
TMCC3-201ENST00000261226 TIMELESSQ9UNS1 1208 aa18.5■□□□□ 0.55
TMCC3-201ENST00000261226 KNSTRNQ9Y448 316 aa18.49■□□□□ 0.55
TMCC3-201ENST00000261226 NCLP19338 710 aaKnown RBP18.49■□□□□ 0.55
TMCC3-201ENST00000261226 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.54
TMCC3-201ENST00000261226 VPS8Q8N3P4 1428 aa18.45■□□□□ 0.54
TMCC3-201ENST00000261226 NEUROD2Q15784 382 aa18.45■□□□□ 0.54
TMCC3-201ENST00000261226 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
TMCC3-201ENST00000261226 HSPA5P11021 654 aaKnown RBP18.44■□□□□ 0.54
TMCC3-201ENST00000261226 CC2D1BQ5T0F9 858 aaKnown RBP18.43■□□□□ 0.54
TMCC3-201ENST00000261226 SETD5Q9C0A6 1442 aa18.43■□□□□ 0.54
TMCC3-201ENST00000261226 FRAT1Q92837 279 aaPredicted RBP18.41■□□□□ 0.54
TMCC3-201ENST00000261226 FTSJ3Q8IY81 847 aaKnown RBP18.41■□□□□ 0.54
TMCC3-201ENST00000261226 CFDP1Q9UEE9 299 aaPredicted RBP18.41■□□□□ 0.54
TMCC3-201ENST00000261226 SENP3Q9H4L4 574 aaPredicted RBP18.39■□□□□ 0.53
TMCC3-201ENST00000261226 PTMAP06454 111 aaKnown RBP18.38■□□□□ 0.53
TMCC3-201ENST00000261226 KCNH8Q96L42 1107 aa18.38■□□□□ 0.53
TMCC3-201ENST00000261226 CDCA8Q53HL2 280 aa18.37■□□□□ 0.53
TMCC3-201ENST00000261226 ESF1Q9H501 851 aaKnown RBP18.37■□□□□ 0.53
TMCC3-201ENST00000261226 RAB3GAP2Q9H2M9 1393 aa18.37■□□□□ 0.53
TMCC3-201ENST00000261226 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
TMCC3-201ENST00000261226 CFAP53Q96M91 514 aa18.36■□□□□ 0.53
TMCC3-201ENST00000261226 PLEKHD1A6NEE1 506 aa18.36■□□□□ 0.53
TMCC3-201ENST00000261226 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
TMCC3-201ENST00000261226 DNTTIP2Q5QJE6 756 aaKnown RBP18.34■□□□□ 0.53
TMCC3-201ENST00000261226 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
TMCC3-201ENST00000261226 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
TMCC3-201ENST00000261226 TPRNQ4KMQ1 711 aa18.32■□□□□ 0.52
TMCC3-201ENST00000261226 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
TMCC3-201ENST00000261226 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
TMCC3-201ENST00000261226 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
TMCC3-201ENST00000261226 TNNT2P45379 298 aaPredicted RBP18.29■□□□□ 0.52
TMCC3-201ENST00000261226 IPO9Q96P70 1041 aaKnown RBP18.29■□□□□ 0.52
TMCC3-201ENST00000261226 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.29■□□□□ 0.52
TMCC3-201ENST00000261226 SPRYD3Q8NCJ5 442 aa18.29■□□□□ 0.52
TMCC3-201ENST00000261226 DCAF11Q8TEB1 546 aa18.29■□□□□ 0.52
TMCC3-201ENST00000261226 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
TMCC3-201ENST00000261226 FOXD1Q16676 465 aa18.28■□□□□ 0.52
TMCC3-201ENST00000261226 L1TD1Q5T7N2 865 aaKnown RBP18.27■□□□□ 0.51
TMCC3-201ENST00000261226 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.51
TMCC3-201ENST00000261226 TCERG1O14776 1098 aaKnown RBP18.26■□□□□ 0.51
TMCC3-201ENST00000261226 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
TMCC3-201ENST00000261226 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
TMCC3-201ENST00000261226 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
TMCC3-201ENST00000261226 NACADO15069 1562 aa18.23■□□□□ 0.51
TMCC3-201ENST00000261226 MAPK8IP3Q9UPT6 1336 aa18.23■□□□□ 0.51
TMCC3-201ENST00000261226 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
TMCC3-201ENST00000261226 HSCBQ8IWL3 235 aa18.22■□□□□ 0.51
TMCC3-201ENST00000261226 TMF1P82094 1093 aa18.21■□□□□ 0.51
TMCC3-201ENST00000261226 ARHGAP35Q9NRY4 1499 aa18.21■□□□□ 0.51
TMCC3-201ENST00000261226 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
TMCC3-201ENST00000261226 NUDCQ9Y266 331 aa18.21■□□□□ 0.51
TMCC3-201ENST00000261226 PLCB2Q00722 1185 aa18.2■□□□□ 0.5
TMCC3-201ENST00000261226 DHX57Q6P158 1386 aaKnown RBP18.19■□□□□ 0.5
TMCC3-201ENST00000261226 ARID4BQ4LE39 1312 aaPredicted RBP18.19■□□□□ 0.5
TMCC3-201ENST00000261226 SLKQ9H2G2 1235 aaPredicted RBP18.19■□□□□ 0.5
TMCC3-201ENST00000261226 CUX2O14529 1486 aa18.16■□□□□ 0.5
TMCC3-201ENST00000261226 MS4A1P11836 297 aa18.16■□□□□ 0.5
TMCC3-201ENST00000261226 GZF1Q9H116 711 aaPredicted RBP18.16■□□□□ 0.5
TMCC3-201ENST00000261226 KTN1Q86UP2 1357 aaKnown RBP18.16■□□□□ 0.5
TMCC3-201ENST00000261226 U2SURPO15042 1029 aaKnown RBP18.15■□□□□ 0.5
TMCC3-201ENST00000261226 MPHOSPH9Q99550 1183 aa18.15■□□□□ 0.5
TMCC3-201ENST00000261226 MSNP26038 577 aaKnown RBP18.13■□□□□ 0.49
TMCC3-201ENST00000261226 PKD2Q13563 968 aa18.13■□□□□ 0.49
TMCC3-201ENST00000261226 RALBP1Q15311 655 aa18.11■□□□□ 0.49
TMCC3-201ENST00000261226 L3MBTL2Q969R5 705 aa18.11■□□□□ 0.49
TMCC3-201ENST00000261226 PNNQ9H307 717 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms