RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 DDRGK1Q96HY6 314 aa12.99□□□□□ -0.33
CTDSPL2-201ENST00000260327 ERICH6BQ5W0A0 696 aa12.98□□□□□ -0.33
CTDSPL2-201ENST00000260327 RBM19Q9Y4C8 960 aaKnown RBP12.98□□□□□ -0.33
CTDSPL2-201ENST00000260327 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
CTDSPL2-201ENST00000260327 KDM2AQ9Y2K7 1162 aa12.95□□□□□ -0.34
CTDSPL2-201ENST00000260327 PPM1GO15355 546 aaPredicted RBP12.94□□□□□ -0.34
CTDSPL2-201ENST00000260327 EIF4G2P78344 907 aaKnown RBP eCLIP12.93□□□□□ -0.34
CTDSPL2-201ENST00000260327 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
CTDSPL2-201ENST00000260327 GOLGA3Q08378 1498 aa12.93□□□□□ -0.34
CTDSPL2-201ENST00000260327 RRP7BPQ9NSQ0 103 aa12.92□□□□□ -0.34
CTDSPL2-201ENST00000260327 SIN3AQ96ST3 1273 aa12.92□□□□□ -0.34
CTDSPL2-201ENST00000260327 BECN1Q14457 450 aa12.91□□□□□ -0.34
CTDSPL2-201ENST00000260327 ARID4BQ4LE39 1312 aaPredicted RBP12.91□□□□□ -0.34
CTDSPL2-201ENST00000260327 B4GALNT3Q6L9W6 998 aa12.91□□□□□ -0.34
CTDSPL2-201ENST00000260327 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
CTDSPL2-201ENST00000260327 MTUS2Q5JR59 1369 aa12.89□□□□□ -0.35
CTDSPL2-201ENST00000260327 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
CTDSPL2-201ENST00000260327 NCLP19338 710 aaKnown RBP12.88□□□□□ -0.35
CTDSPL2-201ENST00000260327 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
CTDSPL2-201ENST00000260327 TNIKQ9UKE5 1360 aa12.88□□□□□ -0.35
CTDSPL2-201ENST00000260327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.359e-7■■■□□ 17.5
CTDSPL2-201ENST00000260327 WDR43Q15061 677 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTDSPL2-201ENST00000260327 DNTTIP2Q5QJE6 756 aaKnown RBP12.85□□□□□ -0.35
CTDSPL2-201ENST00000260327 CHGAP10645 457 aaKnown RBP12.85□□□□□ -0.35
CTDSPL2-201ENST00000260327 PTMAP06454 111 aaKnown RBP12.83□□□□□ -0.35
CTDSPL2-201ENST00000260327 EEA1Q15075 1411 aa12.83□□□□□ -0.36
CTDSPL2-201ENST00000260327 TPRNQ4KMQ1 711 aa12.82□□□□□ -0.36
CTDSPL2-201ENST00000260327 GOLGA6L22H0YM25 854 aa12.79□□□□□ -0.36
CTDSPL2-201ENST00000260327 RGS3P49796 1198 aa12.79□□□□□ -0.36
CTDSPL2-201ENST00000260327 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
CTDSPL2-201ENST00000260327 CDK11BP21127 795 aaKnown RBP12.78□□□□□ -0.36
CTDSPL2-201ENST00000260327 ARID3AQ99856 593 aa12.76□□□□□ -0.37
CTDSPL2-201ENST00000260327 CEP164Q9UPV0 1460 aa12.76□□□□□ -0.37
CTDSPL2-201ENST00000260327 SOGA1O94964 1423 aa12.76□□□□□ -0.37
CTDSPL2-201ENST00000260327 RB1CC1Q8TDY2 1594 aa12.75□□□□□ -0.37
CTDSPL2-201ENST00000260327 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
CTDSPL2-201ENST00000260327 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
CTDSPL2-201ENST00000260327 RGL3Q3MIN7 710 aa12.73□□□□□ -0.37
CTDSPL2-201ENST00000260327 SPRYD3Q8NCJ5 442 aa12.71□□□□□ -0.37
CTDSPL2-201ENST00000260327 PLCB2Q00722 1185 aa12.71□□□□□ -0.38
CTDSPL2-201ENST00000260327 ZBTB7CA1YPR0 619 aa12.7□□□□□ -0.38
CTDSPL2-201ENST00000260327 CCNB3Q8WWL7 1395 aa12.7□□□□□ -0.38
CTDSPL2-201ENST00000260327 SENP3Q9H4L4 574 aaPredicted RBP12.7□□□□□ -0.38
CTDSPL2-201ENST00000260327 MYH16Q9H6N6 1097 aa12.68□□□□□ -0.38
CTDSPL2-201ENST00000260327 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
CTDSPL2-201ENST00000260327 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
CTDSPL2-201ENST00000260327 L1TD1Q5T7N2 865 aaKnown RBP12.67□□□□□ -0.38
CTDSPL2-201ENST00000260327 KANK4Q5T7N3 995 aaPredicted RBP12.66□□□□□ -0.38
CTDSPL2-201ENST00000260327 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
CTDSPL2-201ENST00000260327 MSNP26038 577 aaKnown RBP12.65□□□□□ -0.38
CTDSPL2-201ENST00000260327 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
CTDSPL2-201ENST00000260327 KCNH8Q96L42 1107 aa12.64□□□□□ -0.39
CTDSPL2-201ENST00000260327 GZF1Q9H116 711 aaPredicted RBP12.64□□□□□ -0.39
CTDSPL2-201ENST00000260327 PNNQ9H307 717 aaKnown RBP12.64□□□□□ -0.39
CTDSPL2-201ENST00000260327 ABCC8Q09428 1581 aa12.63□□□□□ -0.39
CTDSPL2-201ENST00000260327 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
CTDSPL2-201ENST00000260327 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
CTDSPL2-201ENST00000260327 HSP90AB1P08238 724 aaKnown RBP12.62□□□□□ -0.39
CTDSPL2-201ENST00000260327 CC2D1BQ5T0F9 858 aaKnown RBP12.62□□□□□ -0.39
CTDSPL2-201ENST00000260327 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
CTDSPL2-201ENST00000260327 HSPA5P11021 654 aaKnown RBP12.6□□□□□ -0.39
CTDSPL2-201ENST00000260327 KNSTRNQ9Y448 316 aa12.6□□□□□ -0.39
CTDSPL2-201ENST00000260327 FRAT1Q92837 279 aaPredicted RBP12.59□□□□□ -0.39
CTDSPL2-201ENST00000260327 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
CTDSPL2-201ENST00000260327 VPS8Q8N3P4 1428 aa12.59□□□□□ -0.39
CTDSPL2-201ENST00000260327 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
CTDSPL2-201ENST00000260327 SETD5Q9C0A6 1442 aa12.58□□□□□ -0.4
CTDSPL2-201ENST00000260327 SLKQ9H2G2 1235 aaPredicted RBP12.58□□□□□ -0.4
CTDSPL2-201ENST00000260327 FTSJ3Q8IY81 847 aaKnown RBP12.57□□□□□ -0.4
CTDSPL2-201ENST00000260327 CFDP1Q9UEE9 299 aaPredicted RBP12.57□□□□□ -0.4
CTDSPL2-201ENST00000260327 PLPPR3Q6T4P5 718 aa12.57□□□□□ -0.4
CTDSPL2-201ENST00000260327 FOXD1Q16676 465 aa12.57□□□□□ -0.4
CTDSPL2-201ENST00000260327 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
CTDSPL2-201ENST00000260327 BAZ1BQ9UIG0 1483 aaKnown RBP12.56□□□□□ -0.4
CTDSPL2-201ENST00000260327 CHMP7Q8WUX9 453 aaPredicted RBP12.56□□□□□ -0.4
CTDSPL2-201ENST00000260327 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
CTDSPL2-201ENST00000260327 HSP90AA2PQ14568 343 aaPredicted RBP12.55□□□□□ -0.4
CTDSPL2-201ENST00000260327 HSCBQ8IWL3 235 aa12.54□□□□□ -0.4
CTDSPL2-201ENST00000260327 ZRSR1Q15695 479 aaKnown RBP12.53□□□□□ -0.4
CTDSPL2-201ENST00000260327 CHAF1AQ13111 956 aaPredicted RBP12.53□□□□□ -0.4
CTDSPL2-201ENST00000260327 PLEKHD1A6NEE1 506 aa12.52□□□□□ -0.41
CTDSPL2-201ENST00000260327 BAZ1AQ9NRL2 1556 aaPredicted RBP12.52□□□□□ -0.41
CTDSPL2-201ENST00000260327 ESF1Q9H501 851 aaKnown RBP12.51□□□□□ -0.41
CTDSPL2-201ENST00000260327 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
CTDSPL2-201ENST00000260327 CASC1Q6TDU7 716 aa12.51□□□□□ -0.41
CTDSPL2-201ENST00000260327 DCAF11Q8TEB1 546 aa12.51□□□□□ -0.41
CTDSPL2-201ENST00000260327 GOLGA6L3A6NEY3 463 aa12.49□□□□□ -0.41
CTDSPL2-201ENST00000260327 RSPH6AQ9H0K4 717 aa12.49□□□□□ -0.41
CTDSPL2-201ENST00000260327 PPP1R15AO75807 674 aaPredicted RBP12.49□□□□□ -0.41
CTDSPL2-201ENST00000260327 CFAP53Q96M91 514 aa12.48□□□□□ -0.41
CTDSPL2-201ENST00000260327 TAOK2Q9UL54 1235 aa12.48□□□□□ -0.41
CTDSPL2-201ENST00000260327 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
CTDSPL2-201ENST00000260327 CDCA8Q53HL2 280 aa12.47□□□□□ -0.41
CTDSPL2-201ENST00000260327 NACADO15069 1562 aa12.47□□□□□ -0.41
CTDSPL2-201ENST00000260327 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
CTDSPL2-201ENST00000260327 TCERG1O14776 1098 aaKnown RBP12.46□□□□□ -0.41
CTDSPL2-201ENST00000260327 SLC4A3P48751 1232 aa12.46□□□□□ -0.41
CTDSPL2-201ENST00000260327 RCAN3Q9UKA8 241 aa12.46□□□□□ -0.42
CTDSPL2-201ENST00000260327 CARMIL1Q5VZK9 1371 aa12.46□□□□□ -0.42
CTDSPL2-201ENST00000260327 DRC7Q8IY82 874 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms